You are here

Home

ATCC10864_004766-T1, ATCC10864_004766-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004766-T1
Unique NameATCC10864_004766-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000084:426649..428872+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004766-T1 ID=ATCC10864_004766-T1|Name=ATCC10864_004766-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2224bp|location=Sequence derived from alignment at MCQH01000084:426649..428872+ (Aspergillus niger ATCC 10864)
ATGCGGTGGAGGGCACTGGGCACACTTAGTCTTGTTCTTGACTTCACCAT
CTGCGGTATGCGCCTTGATCTATCATAACTCATGTAGTTTCTTACAATCA
CAGGGTTCGCCCGTCTGGTGACGGTCCCCACTATTCCATTCGATGATAAT
AATGGCACCTATGCACTGTCCCAGCTCACCAAGATTGTCGTGGATACTCG
CCACGCCAGTACTGTGGATACTCAAGGTCAAACATTAATCCCGCCAACAT
TGAGAGAGTTTGCTGCGACGTTCCAAGAGGACCTTCGATCTTCGCTTGGA
ATCAATCTCCCACTCGTCTCCAGTAGCACCTCCAGCGACAATACAATCTT
CCTGACCCTCTCCAATAACACGGGCTTCCGCGATGTTGCAGGACGCTTCA
CAGCGGAGGCATATGCCTTGCACATCGACAACAAAGGAATCACCATCTCT
GGAGCGAGTCCCCTAGGCGTCTGGTGGGGAACGCGCTCACTAATCCAGGC
CGCTGTAGTCAGCAAACACGACCTTCCTCAGGGCTCTGCAATCGATGCTC
CAGGATGGGAAACACGCGGTGTCATGGTAAGCCCTCCCATTACCACTATA
CAACCAACATCTAACCGATAAGCTCGATGCCGGACGTCACTACTACCCAC
CCGACTTTTTGATCGAAATGTGCTCGTACCTGTCGTTCTTCAAGCAGAAC
GTCTTCCACCTCCACCTCAGCGACAATCTCTACAACAACGTCGACCTCTA
CTCCACCCAGGAATCCATGGACCTCTACGCAGCATTCCGGCCCTGGTCCG
ACGATCCCGCCGTATCTGGGCTCAACAAACGAGCCAACGAATCCTACACG
CGCAGCCAATTCGATCACATCCAGCGCCAATGCGCCCGTCGCGGTGTCAC
TATCATCCCTGAGATAGAAGCCCCCGGGCATGCCCTCGCCATCGTGCAAT
GGCGACCTGAACTCGGCCTCACTGATCTCAGCATGCTCAACATCAGCCAT
CCAGACACCATCCCGACCATGAAATCCATCTGGAAAACCTTCCTCCCCTG
GTTCCACAGCAAAACCGTCCACCTCGGCGCAGACGAATATTCCTCCTCCT
ACGTAGCCGACTACACCGACTTCGTCAACGACATGCACACCTACATCGCC
GAGCAATCCGACAAAGACACCCGCATCTGGGGCACCTTCACCCCATCAGA
GGGCGCCAATGTCTCCAAAGCCGTCACCATCCAGCACTGGGAATACTTCG
AAGACAACCCCTACTTCGACTACATCAAGAATAACTACTCGGTCCTCAAC
TCCGACGACGCCTTCTACATTGTCGGGAAATGGTCCGGAAGCTACCCACA
GTACCTCAACAAGACGCGAGTCTTCCACGGTGATCCAGCAAACAACGGTC
CCTACGCCCCCAACATCTTCTCTACCAGCAACGCAACCGACAACCCTCCA
AGAAATAACCCCTACGTACTCGGCCACATCGCCGCCCTCTGGAACGACTA
CGGGCCCAACGCAACGACCTACCTCGAGGCGTATTACTCCTGGCGTGATG
TTCTCCCCGCACTAGCGGACAAGCAATGGGGCGGTGATATCCTGGAAGAA
GAATATGATGATGTGTTCGATGCTCTTCATGCTGTGATCCCAGGGCAGAA
CTTGGATCGCCATGTCCCAAGCAAAACCGATTTGATTCTGCACTACAACT
TCGCCAATGCCACTGGAACCACAGTTCCAGACTTATCAGGGAATAACTAC
CACGCCACATTCAATCACACCTGTCCCATCGATACTTCTAACTCAACAAT
CAGGTTCACAGGAACATGCACCCTCACTACACCCATCCAGAGCAAAGGGA
GAGACTATACCCTCTCTTTTTCTGTATATCCTTCCACAACTCACCCGTCA
CCTTTATTCTCGGGGAGAGACTCGACACTCCTCAACGGCAACGGGTCAAT
TAGTAATATTACCCTGGTGAGCGGCGGGAATCCATACACATTGAATTACA
GTCTTCCGGTCGGTAAATGGTCGGATGTTAGTTTAATCGGAAAGGGTAAT
AAAACTTTTCTTTCCGTTGATGGTGGCGAAAAGATGGAGTTTCTAGCGAG
ACTAGGGGTGAATGGGGAGTCGCTAGTGTGGGCGCCCATTGCGATCGAGG
CACCAGTGCAGAGGATCGGGGAGGGGTTTGTAGGGATGATGGGGGATGTT
AAGTTGTGGGGGAGTGCGAAGTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000084:426649..428872+

>ATCC10864_004766-T1 ID=ATCC10864_004766-T1|Name=ATCC10864_004766-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6390bp|location=Sequence derived from alignment at MCQH01000084:426649..428872+ (Aspergillus niger ATCC 10864)
ATGCGGTGGAGGGCACTGGGCACACTTAGTCTTGTTCTTGACTTCACCAT
CTGCGGGTTCGCCCGTCTGGTGACGGTCCCCACTATTCCATTCGATGATA
ATAATGGCACCTATGCACTGTCCCAGCTCACCAAGATTGTCGTGGATACT
CGCCACGCCAGTACTGTGGATACTCAAGGTCAAACATTAATCCCGCCAAC
ATTGAGAGAGTTTGCTGCGACGTTCCAAGAGGACCTTCGATCTTCGCTTG
GAATCAATCTCCCACTCGTCTCCAGTAGCACCTCCAGCGACAATACAATC
TTCCTGACCCTCTCCAATAACACGGGCTTCCGCGATGTTGCAGGACGCTT
CACAGCGGAGGCATATGCCTTGCACATCGACAACAAAGGAATCACCATCT
CTGGAGCGAGTCCCCTAGGCGTCTGGTGGGGAACGCGCTCACTAATCCAG
GCCGCTGTAGTCAGCAAACACGACCTTCCTCAGGGCTCTGCAATCGATGC
TCCAGGATGGGAAACACGCGGTGTCATGCTCGATGCCGGACGTCACTACT
ACCCACCCGACTTTTTGATCGAAATGTGCTCGTACCTGTCGTTCTTCAAG
CAGAACGTCTTCCACCTCCACCTCAGCGACAATCTCTACAACAACGTCGA
CCTCTACTCCACCCAGGAATCCATGGACCTCTACGCAGCATTCCGGCCCT
GGTCCGACGATCCCGCCGTATCTGGGCTCAACAAACGAGCCAACGAATCC
TACACGCGCAGCCAATTCGATCACATCCAGCGCCAATGCGCCCGTCGCGG
TGTCACTATCATCCCTGAGATAGAAGCCCCCGGGCATGCCCTCGCCATCG
TGCAATGGCGACCTGAACTCGGCCTCACTGATCTCAGCATGCTCAACATC
AGCCATCCAGACACCATCCCGACCATGAAATCCATCTGGAAAACCTTCCT
CCCCTGGTTCCACAGCAAAACCGTCCACCTCGGCGCAGACGAATATTCCT
CCTCCTACGTAGCCGACTACACCGACTTCGTCAACGACATGCACACCTAC
ATCGCCGAGCAATCCGACAAAGACACCCGCATCTGGGGCACCTTCACCCC
ATCAGAGGGCGCCAATGTCTCCAAAGCCGTCACCATCCAGCACTGGGAAT
ACTTCGAAGACAACCCCTACTTCGACTACATCAAGAATAACTACTCGGTC
CTCAACTCCGACGACGCCTTCTACATTGTCGGGAAATGGTCCGGAAGCTA
CCCACAGTACCTCAACAAGACGCGAGTCTTCCACGGTGATCCAGCAAACA
ACGGTCCCTACGCCCCCAACATCTTCTCTACCAGCAACGCAACCGACAAC
CCTCCAAGAAATAACCCCTACGTACTCGGCCACATCGCCGCCCTCTGGAA
CGACTACGGGCCCAACGCAACGACCTACCTCGAGGCGTATTACTCCTGGC
GTGATGTTCTCCCCGCACTAGCGGACAAGCAATGGGGCGGTGATATCCTG
GAAGAAGAATATGATGATGTGTTCGATGCTCTTCATGCTGTGATCCCAGG
GCAGAACTTGGATCGCCATGTCCCAAGCAAAACCGATTTGATTCTGCACT
ACAACTTCGCCAATGCCACTGGAACCACAGTTCCAGACTTATCAGGGAAT
AACTACCACGCCACATTCAATCACACCTGTCCCATCGATACTTCTAACTC
AACAATCAGGTTCACAGGAACATGCACCCTCACTACACCCATCCAGAGCA
AAGGGAGAGACTATACCCTCTCTTTTTCTGTATATCCTTCCACAACTCAC
CCGTCACCTTTATTCTCGGGGAGAGACTCGACACTCCTCAACGGCAACGG
GTCAATTAGTAATATTACCCTGGTGAGCGGCGGGAATCCATACACATTGA
ATTACAGTCTTCCGGTCGGTAAATGGTCGGATGTTAGTTTAATCGGAAAG
GGTAATAAAACTTTTCTTTCCGTTGATGGTGGCGAAAAGATGGAGTTTCT
AGCGAGACTAGGGGTGAATGGGGAGTCGCTAGTGTGGGCGCCCATTGCGA
TCGAGGCACCAGTGCAGAGGATCGGGGAGGGGTTTGTAGGGATGATGGGG
GATGTTAAGTTGTGGGGGAGTGCGAAGTGAATGCGGTGGAGGGCACTGGG
CACACTTAGTCTTGTTCTTGACTTCACCATCTGCGGGTTCGCCCGTCTGG
TGACGGTCCCCACTATTCCATTCGATGATAATAATGGCACCTATGCACTG
TCCCAGCTCACCAAGATTGTCGTGGATACTCGCCACGCCAGTACTGTGGA
TACTCAAGGTCAAACATTAATCCCGCCAACATTGAGAGAGTTTGCTGCGA
CGTTCCAAGAGGACCTTCGATCTTCGCTTGGAATCAATCTCCCACTCGTC
TCCAGTAGCACCTCCAGCGACAATACAATCTTCCTGACCCTCTCCAATAA
CACGGGCTTCCGCGATGTTGCAGGACGCTTCACAGCGGAGGCATATGCCT
TGCACATCGACAACAAAGGAATCACCATCTCTGGAGCGAGTCCCCTAGGC
GTCTGGTGGGGAACGCGCTCACTAATCCAGGCCGCTGTAGTCAGCAAACA
CGACCTTCCTCAGGGCTCTGCAATCGATGCTCCAGGATGGGAAACACGCG
GTGTCATGCTCGATGCCGGACGTCACTACTACCCACCCGACTTTTTGATC
GAAATGTGCTCGTACCTGTCGTTCTTCAAGCAGAACGTCTTCCACCTCCA
CCTCAGCGACAATCTCTACAACAACGTCGACCTCTACTCCACCCAGGAAT
CCATGGACCTCTACGCAGCATTCCGGCCCTGGTCCGACGATCCCGCCGTA
TCTGGGCTCAACAAACGAGCCAACGAATCCTACACGCGCAGCCAATTCGA
TCACATCCAGCGCCAATGCGCCCGTCGCGGTGTCACTATCATCCCTGAGA
TAGAAGCCCCCGGGCATGCCCTCGCCATCGTGCAATGGCGACCTGAACTC
GGCCTCACTGATCTCAGCATGCTCAACATCAGCCATCCAGACACCATCCC
GACCATGAAATCCATCTGGAAAACCTTCCTCCCCTGGTTCCACAGCAAAA
CCGTCCACCTCGGCGCAGACGAATATTCCTCCTCCTACGTAGCCGACTAC
ACCGACTTCGTCAACGACATGCACACCTACATCGCCGAGCAATCCGACAA
AGACACCCGCATCTGGGGCACCTTCACCCCATCAGAGGGCGCCAATGTCT
CCAAAGCCGTCACCATCCAGCACTGGGAATACTTCGAAGACAACCCCTAC
TTCGACTACATCAAGAATAACTACTCGGTCCTCAACTCCGACGACGCCTT
CTACATTGTCGGGAAATGGTCCGGAAGCTACCCACAGTACCTCAACAAGA
CGCGAGTCTTCCACGGTGATCCAGCAAACAACGGTCCCTACGCCCCCAAC
ATCTTCTCTACCAGCAACGCAACCGACAACCCTCCAAGAAATAACCCCTA
CGTACTCGGCCACATCGCCGCCCTCTGGAACGACTACGGGCCCAACGCAA
CGACCTACCTCGAGGCGTATTACTCCTGGCGTGATGTTCTCCCCGCACTA
GCGGACAAGCAATGGGGCGGTGATATCCTGGAAGAAGAATATGATGATGT
GTTCGATGCTCTTCATGCTGTGATCCCAGGGCAGAACTTGGATCGCCATG
TCCCAAGCAAAACCGATTTGATTCTGCACTACAACTTCGCCAATGCCACT
GGAACCACAGTTCCAGACTTATCAGGGAATAACTACCACGCCACATTCAA
TCACACCTGTCCCATCGATACTTCTAACTCAACAATCAGGTTCACAGGAA
CATGCACCCTCACTACACCCATCCAGAGCAAAGGGAGAGACTATACCCTC
TCTTTTTCTGTATATCCTTCCACAACTCACCCGTCACCTTTATTCTCGGG
GAGAGACTCGACACTCCTCAACGGCAACGGGTCAATTAGTAATATTACCC
TGGTGAGCGGCGGGAATCCATACACATTGAATTACAGTCTTCCGGTCGGT
AAATGGTCGGATGTTAGTTTAATCGGAAAGGGTAATAAAACTTTTCTTTC
CGTTGATGGTGGCGAAAAGATGGAGTTTCTAGCGAGACTAGGGGTGAATG
GGGAGTCGCTAGTGTGGGCGCCCATTGCGATCGAGGCACCAGTGCAGAGG
ATCGGGGAGGGGTTTGTAGGGATGATGGGGGATGTTAAGTTGTGGGGGAG
TGCGAAGTGAATGCGGTGGAGGGCACTGGGCACACTTAGTCTTGTTCTTG
ACTTCACCATCTGCGGGTTCGCCCGTCTGGTGACGGTCCCCACTATTCCA
TTCGATGATAATAATGGCACCTATGCACTGTCCCAGCTCACCAAGATTGT
CGTGGATACTCGCCACGCCAGTACTGTGGATACTCAAGGTCAAACATTAA
TCCCGCCAACATTGAGAGAGTTTGCTGCGACGTTCCAAGAGGACCTTCGA
TCTTCGCTTGGAATCAATCTCCCACTCGTCTCCAGTAGCACCTCCAGCGA
CAATACAATCTTCCTGACCCTCTCCAATAACACGGGCTTCCGCGATGTTG
CAGGACGCTTCACAGCGGAGGCATATGCCTTGCACATCGACAACAAAGGA
ATCACCATCTCTGGAGCGAGTCCCCTAGGCGTCTGGTGGGGAACGCGCTC
ACTAATCCAGGCCGCTGTAGTCAGCAAACACGACCTTCCTCAGGGCTCTG
CAATCGATGCTCCAGGATGGGAAACACGCGGTGTCATGCTCGATGCCGGA
CGTCACTACTACCCACCCGACTTTTTGATCGAAATGTGCTCGTACCTGTC
GTTCTTCAAGCAGAACGTCTTCCACCTCCACCTCAGCGACAATCTCTACA
ACAACGTCGACCTCTACTCCACCCAGGAATCCATGGACCTCTACGCAGCA
TTCCGGCCCTGGTCCGACGATCCCGCCGTATCTGGGCTCAACAAACGAGC
CAACGAATCCTACACGCGCAGCCAATTCGATCACATCCAGCGCCAATGCG
CCCGTCGCGGTGTCACTATCATCCCTGAGATAGAAGCCCCCGGGCATGCC
CTCGCCATCGTGCAATGGCGACCTGAACTCGGCCTCACTGATCTCAGCAT
GCTCAACATCAGCCATCCAGACACCATCCCGACCATGAAATCCATCTGGA
AAACCTTCCTCCCCTGGTTCCACAGCAAAACCGTCCACCTCGGCGCAGAC
GAATATTCCTCCTCCTACGTAGCCGACTACACCGACTTCGTCAACGACAT
GCACACCTACATCGCCGAGCAATCCGACAAAGACACCCGCATCTGGGGCA
CCTTCACCCCATCAGAGGGCGCCAATGTCTCCAAAGCCGTCACCATCCAG
CACTGGGAATACTTCGAAGACAACCCCTACTTCGACTACATCAAGAATAA
CTACTCGGTCCTCAACTCCGACGACGCCTTCTACATTGTCGGGAAATGGT
CCGGAAGCTACCCACAGTACCTCAACAAGACGCGAGTCTTCCACGGTGAT
CCAGCAAACAACGGTCCCTACGCCCCCAACATCTTCTCTACCAGCAACGC
AACCGACAACCCTCCAAGAAATAACCCCTACGTACTCGGCCACATCGCCG
CCCTCTGGAACGACTACGGGCCCAACGCAACGACCTACCTCGAGGCGTAT
TACTCCTGGCGTGATGTTCTCCCCGCACTAGCGGACAAGCAATGGGGCGG
TGATATCCTGGAAGAAGAATATGATGATGTGTTCGATGCTCTTCATGCTG
TGATCCCAGGGCAGAACTTGGATCGCCATGTCCCAAGCAAAACCGATTTG
ATTCTGCACTACAACTTCGCCAATGCCACTGGAACCACAGTTCCAGACTT
ATCAGGGAATAACTACCACGCCACATTCAATCACACCTGTCCCATCGATA
CTTCTAACTCAACAATCAGGTTCACAGGAACATGCACCCTCACTACACCC
ATCCAGAGCAAAGGGAGAGACTATACCCTCTCTTTTTCTGTATATCCTTC
CACAACTCACCCGTCACCTTTATTCTCGGGGAGAGACTCGACACTCCTCA
ACGGCAACGGGTCAATTAGTAATATTACCCTGGTGAGCGGCGGGAATCCA
TACACATTGAATTACAGTCTTCCGGTCGGTAAATGGTCGGATGTTAGTTT
AATCGGAAAGGGTAATAAAACTTTTCTTTCCGTTGATGGTGGCGAAAAGA
TGGAGTTTCTAGCGAGACTAGGGGTGAATGGGGAGTCGCTAGTGTGGGCG
CCCATTGCGATCGAGGCACCAGTGCAGAGGATCGGGGAGGGGTTTGTAGG
GATGATGGGGGATGTTAAGTTGTGGGGGAGTGCGAAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004563beta-N-acetylhexosaminidase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004766ATCC10864_004766Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004766-T1.exon1ATCC10864_004766-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004766-T1.exon2ATCC10864_004766-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004766-T1.exon3ATCC10864_004766-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004766-T1.cdsATCC10864_004766-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004766-T1ATCC10864_004766-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015883
InterProIPR029018
InterProIPR015882
InterProIPR013320
InterProIPR017853
InterProIPR025705
PFAMPF02838
Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:GH20
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000084supercontigMCQH01000084:426649..428872 +
Powered by Drupal