You are here

Home

ATCC10864_004802-T1, ATCC10864_004802-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004802-T1
Unique NameATCC10864_004802-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000110:54381..55433-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004802-T1 ID=ATCC10864_004802-T1|Name=ATCC10864_004802-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1053bp|location=Sequence derived from alignment at MCQH01000110:54381..55433- (Aspergillus niger ATCC 10864)
ATGTCGTTCAATCCTAATGATGTCGACCTCGACACGGCCGACCCAACCGA
GATTATTTGCTATCTCAACAAGTCAGAAAATGACTACAACGGCCAGTTGG
GTGCCCGCATCTCGGCTATTTTCGTGATCTTTGCCGTTTCAACTGCAGTG
ACCTTTTTCCCCGTCGTCGCCAAGCGCGTCCCCAGGCTGCATATTCCACT
CTACGTCTACCTCTTCGCTCGTTACTTCGGTGCAGGTGTCATCATTGCAA
CGGCTTTCATCCATCTTCTGGACCCCGCATACTCCGAAATCGGCCCGCAG
TCATGCGTCGGAATGACTGGTAACTGGGCCGATTACTCCTGGTGCCCTGC
GATCGTCCTGACCTCGCTCATGTGCATCTTCCTCCTTGACTTCGGTGCCG
AGCGTTATGTCGAAGTCAAGTATGGCGTCTGCAGAGAGGACCCCGAGCCC
ATCATGACTAGCGCAGTGGATAACTCGACTGTAGACAAGGAGTCGCCTGG
AAACACTAGAAAGGGCGAGGCTGATGTGGAGGAGTTGTCCACCAGTGACA
CATTGATCGAGAAGTCCTTCAAGCAACAGATTGCCGCGTTCCTCATTCTC
GAGTTCGGTGTCATCTTCCACTCCGTCATTATTGGTCTGAACCTGGGAGT
CACTGGCGACGAATTCGCGACGCTCTACCCGGTCCTTGTCTTCCACCAGT
CCTTCGAAGGTCTGGGTATTGGAGCTCGTATGTCCGCCATCCCCTTCCGT
AAGGGCAGCTGGCTGCCGTGGATCCTTTGCAGCTTGTACGGATTGACTAC
ACCCATCTCGATCGCTATTGGTCTCGGTGTCAGAACTACATACAACTCTG
GCTCGTACACCGCCAACGTGGTCTCCGGTGTTCTGGATGCCATTTCTGCG
GGTATCCTGATTTACACTGGTCTGGTTGAGCTTTTGGCTAGAGACTTCCT
CTTCGATCCTCACCGCTCTCAAGACAACAAGCGGTTGGCATTCATGGTTA
TCACCATGCTCTGGGGTGCTGGTATTATGGCTCTTCTCGGAAAATGGGCT
TAA
back to top

Coding sequence (CDS) from alignment at MCQH01000110:54381..55433-

>ATCC10864_004802-T1 ID=ATCC10864_004802-T1|Name=ATCC10864_004802-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1053bp|location=Sequence derived from alignment at MCQH01000110:54381..55433- (Aspergillus niger ATCC 10864)
ATGTCGTTCAATCCTAATGATGTCGACCTCGACACGGCCGACCCAACCGA
GATTATTTGCTATCTCAACAAGTCAGAAAATGACTACAACGGCCAGTTGG
GTGCCCGCATCTCGGCTATTTTCGTGATCTTTGCCGTTTCAACTGCAGTG
ACCTTTTTCCCCGTCGTCGCCAAGCGCGTCCCCAGGCTGCATATTCCACT
CTACGTCTACCTCTTCGCTCGTTACTTCGGTGCAGGTGTCATCATTGCAA
CGGCTTTCATCCATCTTCTGGACCCCGCATACTCCGAAATCGGCCCGCAG
TCATGCGTCGGAATGACTGGTAACTGGGCCGATTACTCCTGGTGCCCTGC
GATCGTCCTGACCTCGCTCATGTGCATCTTCCTCCTTGACTTCGGTGCCG
AGCGTTATGTCGAAGTCAAGTATGGCGTCTGCAGAGAGGACCCCGAGCCC
ATCATGACTAGCGCAGTGGATAACTCGACTGTAGACAAGGAGTCGCCTGG
AAACACTAGAAAGGGCGAGGCTGATGTGGAGGAGTTGTCCACCAGTGACA
CATTGATCGAGAAGTCCTTCAAGCAACAGATTGCCGCGTTCCTCATTCTC
GAGTTCGGTGTCATCTTCCACTCCGTCATTATTGGTCTGAACCTGGGAGT
CACTGGCGACGAATTCGCGACGCTCTACCCGGTCCTTGTCTTCCACCAGT
CCTTCGAAGGTCTGGGTATTGGAGCTCGTATGTCCGCCATCCCCTTCCGT
AAGGGCAGCTGGCTGCCGTGGATCCTTTGCAGCTTGTACGGATTGACTAC
ACCCATCTCGATCGCTATTGGTCTCGGTGTCAGAACTACATACAACTCTG
GCTCGTACACCGCCAACGTGGTCTCCGGTGTTCTGGATGCCATTTCTGCG
GGTATCCTGATTTACACTGGTCTGGTTGAGCTTTTGGCTAGAGACTTCCT
CTTCGATCCTCACCGCTCTCAAGACAACAAGCGGTTGGCATTCATGGTTA
TCACCATGCTCTGGGGTGCTGGTATTATGGCTCTTCTCGGAAAATGGGCT
TAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005385zinc ion transmembrane transporter activity
GO:0046873metal ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
GO:0071577zinc ion transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004802ATCC10864_004802Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004802-T1.cdsATCC10864_004802-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004802-T1.exon1ATCC10864_004802-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004802-T1ATCC10864_004802-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR004698
InterProIPR003689
PFAMPF02535
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000110supercontigMCQH01000110:54381..55433 -
Powered by Drupal