You are here

Home

ATCC10864_004807-T1, ATCC10864_004807-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004807-T1
Unique NameATCC10864_004807-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000110:71361..72528+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004807-T1 ID=ATCC10864_004807-T1|Name=ATCC10864_004807-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1168bp|location=Sequence derived from alignment at MCQH01000110:71361..72528+ (Aspergillus niger ATCC 10864)
ATGCGTTCTTTCGTCTTCTCCTCGCTTTTGGCTCTCACCTCAGCCCTATC
CGTTGAGGACCTCTACGTCTCCGAGGCCCCCTCCTCCCCTCGCCCCTATA
TCCTCCCTCACTATGAGAACTCCCATGCCGTGACGATCGACTCCCAGCTC
TACCGATTTACCGTCACCGGCCCCTCCTCCGACTATGCCTTTACCCTGAT
GAGCACCAATGCGCCCTCGAGCAGCTCCCTCGGTGTCCTGCCACACATTC
ACCGCACACACTATGAGAACTTCTTCAGCTTCAAGGGCCGCTTCCAGCTC
TGGGCCCAAAAGGGCGATGGAGAACAAGAAGCTCGTCTCCTCACCCAGGG
AGACTATGGTTCTGTTCCCCGGAACACTACCCACACCTTCCAGATCCTCG
ATCCGGACACCGAGATGGTGGGAGTGATTGTTCCTGGTGGATTCGAGTAA
GCCAAAAACCCCATCTATTCATTCTCATATCAGTATAGTAACCAAGTTGA
AAACAAATAGGGACCTCTTCTACGCCCTCGGCACCAACTACACCTCCGGA
ACCGAAACCCCCTACGTACCTGGCTCCGGCAACTCCTCTTCATCCTCCGC
CACCGGCCCCGACAGCAGCACCATCTCCGGCCTGCAACAATACGACGTCT
ACGCCCAGCTCGACTTCACTCCCCGCCGGGACATCGTCAACGGCACAGCC
CCCTCCGATTCCGGCTGGCACACCGAGTCCGACACCCTCGGCGCCGCCGG
CAAGCCGTACTTCATCGCCAACAACTACGGCCCCAAGTACCTCAACTCGC
AGTACGGGGCGTACCAGATCGTGCAGCCATTGGTGACGGCCACGCAGGCC
CAGGATACAAACTATACCCTGTCGACGATCATCATGAGTCGGCAGCCGAG
CAATGCGACGGCGCCGACGTGGACGGCGGGCCCGGCGGCGTTTGAGGTGC
TGGAGGGTAGCGTGCAGGTGCAGATTGGGGAGTATGAGACTGCGAGGGTG
GAGATGGGAGATGTGGTGTTTGTTCCTAAGGGTGTGACGTATCGGTATTG
GAATGAGGGGGCACAGGCGAAGGTGTTGTATGTTTCTTCTGGGGCGGATG
GAGTGGATAGTCAGTTGATAAAGGGGGGAAGGACGTGGGCGGACCCGGTC
TGGCCGAAGTATTTTTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000110:71361..72528+

>ATCC10864_004807-T1 ID=ATCC10864_004807-T1|Name=ATCC10864_004807-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2208bp|location=Sequence derived from alignment at MCQH01000110:71361..72528+ (Aspergillus niger ATCC 10864)
ATGCGTTCTTTCGTCTTCTCCTCGCTTTTGGCTCTCACCTCAGCCCTATC
CGTTGAGGACCTCTACGTCTCCGAGGCCCCCTCCTCCCCTCGCCCCTATA
TCCTCCCTCACTATGAGAACTCCCATGCCGTGACGATCGACTCCCAGCTC
TACCGATTTACCGTCACCGGCCCCTCCTCCGACTATGCCTTTACCCTGAT
GAGCACCAATGCGCCCTCGAGCAGCTCCCTCGGTGTCCTGCCACACATTC
ACCGCACACACTATGAGAACTTCTTCAGCTTCAAGGGCCGCTTCCAGCTC
TGGGCCCAAAAGGGCGATGGAGAACAAGAAGCTCGTCTCCTCACCCAGGG
AGACTATGGTTCTGTTCCCCGGAACACTACCCACACCTTCCAGATCCTCG
ATCCGGACACCGAGATGGTGGGAGTGATTGTTCCTGGTGGATTCGAGGAC
CTCTTCTACGCCCTCGGCACCAACTACACCTCCGGAACCGAAACCCCCTA
CGTACCTGGCTCCGGCAACTCCTCTTCATCCTCCGCCACCGGCCCCGACA
GCAGCACCATCTCCGGCCTGCAACAATACGACGTCTACGCCCAGCTCGAC
TTCACTCCCCGCCGGGACATCGTCAACGGCACAGCCCCCTCCGATTCCGG
CTGGCACACCGAGTCCGACACCCTCGGCGCCGCCGGCAAGCCGTACTTCA
TCGCCAACAACTACGGCCCCAAGTACCTCAACTCGCAGTACGGGGCGTAC
CAGATCGTGCAGCCATTGGTGACGGCCACGCAGGCCCAGGATACAAACTA
TACCCTGTCGACGATCATCATGAGTCGGCAGCCGAGCAATGCGACGGCGC
CGACGTGGACGGCGGGCCCGGCGGCGTTTGAGGTGCTGGAGGGTAGCGTG
CAGGTGCAGATTGGGGAGTATGAGACTGCGAGGGTGGAGATGGGAGATGT
GGTGTTTGTTCCTAAGGGTGTGACGTATCGGTATTGGAATGAGGGGGCAC
AGGCGAAGGTGTTGTATGTTTCTTCTGGGGCGGATGGAGTGGATAGTCAG
TTGATAAAGGGGGGAAGGACGTGGGCGGACCCGGTCTGGCCGAAGTATTT
TTAGATGCGTTCTTTCGTCTTCTCCTCGCTTTTGGCTCTCACCTCAGCCC
TATCCGTTGAGGACCTCTACGTCTCCGAGGCCCCCTCCTCCCCTCGCCCC
TATATCCTCCCTCACTATGAGAACTCCCATGCCGTGACGATCGACTCCCA
GCTCTACCGATTTACCGTCACCGGCCCCTCCTCCGACTATGCCTTTACCC
TGATGAGCACCAATGCGCCCTCGAGCAGCTCCCTCGGTGTCCTGCCACAC
ATTCACCGCACACACTATGAGAACTTCTTCAGCTTCAAGGGCCGCTTCCA
GCTCTGGGCCCAAAAGGGCGATGGAGAACAAGAAGCTCGTCTCCTCACCC
AGGGAGACTATGGTTCTGTTCCCCGGAACACTACCCACACCTTCCAGATC
CTCGATCCGGACACCGAGATGGTGGGAGTGATTGTTCCTGGTGGATTCGA
GGACCTCTTCTACGCCCTCGGCACCAACTACACCTCCGGAACCGAAACCC
CCTACGTACCTGGCTCCGGCAACTCCTCTTCATCCTCCGCCACCGGCCCC
GACAGCAGCACCATCTCCGGCCTGCAACAATACGACGTCTACGCCCAGCT
CGACTTCACTCCCCGCCGGGACATCGTCAACGGCACAGCCCCCTCCGATT
CCGGCTGGCACACCGAGTCCGACACCCTCGGCGCCGCCGGCAAGCCGTAC
TTCATCGCCAACAACTACGGCCCCAAGTACCTCAACTCGCAGTACGGGGC
GTACCAGATCGTGCAGCCATTGGTGACGGCCACGCAGGCCCAGGATACAA
ACTATACCCTGTCGACGATCATCATGAGTCGGCAGCCGAGCAATGCGACG
GCGCCGACGTGGACGGCGGGCCCGGCGGCGTTTGAGGTGCTGGAGGGTAG
CGTGCAGGTGCAGATTGGGGAGTATGAGACTGCGAGGGTGGAGATGGGAG
ATGTGGTGTTTGTTCCTAAGGGTGTGACGTATCGGTATTGGAATGAGGGG
GCACAGGCGAAGGTGTTGTATGTTTCTTCTGGGGCGGATGGAGTGGATAG
TCAGTTGATAAAGGGGGGAAGGACGTGGGCGGACCCGGTCTGGCCGAAGT
ATTTTTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004807ATCC10864_004807Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004807-T1.exon1ATCC10864_004807-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004807-T1.exon2ATCC10864_004807-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004807-T1.cdsATCC10864_004807-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004807-T1ATCC10864_004807-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR014710
InterProIPR011051
Properties
Property NameValue
NoteSECRETED:SignalP(1-15)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000110supercontigMCQH01000110:71361..72528 +
Powered by Drupal