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ATCC10864_004832-T1, ATCC10864_004832-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004832-T1
Unique NameATCC10864_004832-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000110:122052..123531+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004832-T1 ID=ATCC10864_004832-T1|Name=ATCC10864_004832-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1480bp|location=Sequence derived from alignment at MCQH01000110:122052..123531+ (Aspergillus niger ATCC 10864)
ATGTCTATCGAAGCGGGACCCCCAACAACCATCAACGGCACCGAAGTACT
CCCTACCAAGCAATGGGCGCGAGTACTCGAAGCCCTCTTCTCAGAATCCC
TCCTAGCCAAGGTCTGGTTCGTCGCATCCAAGGCGATGGGTAGTGTGAGT
TATTTCGCCGAACCGCTAAATGTTTCACACTATCCTAAACAAAATACATT
CTACATAGACAACCCCTCCAACCTTCTACCCCGAATATACCGGCGAAGAC
AAGACCACATATATCTACCGAACCCTTGACTTCTGGACCTCCGGCTTCTT
CCCAGGCTCTTTATACCTCCTTTTAGAACGCAGCACTCTCTTCCGCGACC
GGCATCTTATTCTCCAACGACAAACCAGCGAATCCATCCTCCACCCCCAT
CCCCTCCAACACGAGCACCTCTGCCGCTGGTGGACAGCAAACCTTCACCA
AAACGCCCTTCGCAAGGATACTCACGACCTAGGGTTCATGATCACCCCTT
GGGCGATGAAAGCATGGACCCTGCATCGAGACCCAGCAGCCTACAACACT
CTCATACTAGCAGCCCACTCCCTCGCCAGTCGCTTTAATGAATCAACCCA
GTGTATTCGTAGCTGGGACCAGTGCATCACCAAGCGCTATGCATACAGAA
ATTCGTCGCAGGACTTCCTATTTATCATCGACAACATGCTGAACCTGGAT
TTGCTTTTCTGGGCAGCGAGAGAAACAGGCTGTCGGAGGCTTTATGATAT
AGCCAGGGCTCATGCGATCACTACACAGAAGCATCATATCCGAGATGACT
ATACGACATTTCACGTTGTTGATCTGGACCTGGAGACGGGGGAGGTGAAG
AAAAAATTCACAAATCAGGGATATAGTGATGATAGCTGCTGGGCACGAGG
CCAGGCGTGGGGAATCATGGGGTTCGCGCAGACATTCGAGTGGACAAGAG
AGATGAGATTCCTTCGCACTGCTAGAGCACTGGCGGATGTATTTCTTGCG
AGATTGCCGGATGATGGCGTCCCATATTGGGATTTTGATGCGCCTGTTAC
TGACACCTCCCCACGCGATACCTCTGCTGCGATGATCGCTGCCTGTGGGA
TGTTGTTGCTCTATAAGGCTTACAAGAAGCTGCATGATGTTGAGGCGGCT
AACCACTACCTTCGGGCTGCTATGAAGCTGGTTGATTGTACGGTTGTGGG
GTATTTGAATCCCCCTATGCGGTTCGAGGCTGGTCCTGCGTCAGAAATCT
CCGTGTACGCAGACCAGTGCTCGACGCATCACACTGAGACTCGGAACGGG
GCGGAAGTGCTGAGGGTGGTTGGGGATGTTGCTGAAACTATACTGACGGG
CGCAACAATCAATAACTATGAGTTTGCTCCGCGAAGGTGGTCGGACCATG
GTCTCGTCTATGCTGATCATTATTTCTTGCTGTTTGGAAATATGCTCCTT
GAGATGGACTTGGTCGATCCTCATATATAA
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Coding sequence (CDS) from alignment at MCQH01000110:122052..123531+

>ATCC10864_004832-T1 ID=ATCC10864_004832-T1|Name=ATCC10864_004832-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2832bp|location=Sequence derived from alignment at MCQH01000110:122052..123531+ (Aspergillus niger ATCC 10864)
ATGTCTATCGAAGCGGGACCCCCAACAACCATCAACGGCACCGAAGTACT
CCCTACCAAGCAATGGGCGCGAGTACTCGAAGCCCTCTTCTCAGAATCCC
TCCTAGCCAAGGTCTGGTTCGTCGCATCCAAGGCGATGGGTAGTACAACC
CCTCCAACCTTCTACCCCGAATATACCGGCGAAGACAAGACCACATATAT
CTACCGAACCCTTGACTTCTGGACCTCCGGCTTCTTCCCAGGCTCTTTAT
ACCTCCTTTTAGAACGCAGCACTCTCTTCCGCGACCGGCATCTTATTCTC
CAACGACAAACCAGCGAATCCATCCTCCACCCCCATCCCCTCCAACACGA
GCACCTCTGCCGCTGGTGGACAGCAAACCTTCACCAAAACGCCCTTCGCA
AGGATACTCACGACCTAGGGTTCATGATCACCCCTTGGGCGATGAAAGCA
TGGACCCTGCATCGAGACCCAGCAGCCTACAACACTCTCATACTAGCAGC
CCACTCCCTCGCCAGTCGCTTTAATGAATCAACCCAGTGTATTCGTAGCT
GGGACCAGTGCATCACCAAGCGCTATGCATACAGAAATTCGTCGCAGGAC
TTCCTATTTATCATCGACAACATGCTGAACCTGGATTTGCTTTTCTGGGC
AGCGAGAGAAACAGGCTGTCGGAGGCTTTATGATATAGCCAGGGCTCATG
CGATCACTACACAGAAGCATCATATCCGAGATGACTATACGACATTTCAC
GTTGTTGATCTGGACCTGGAGACGGGGGAGGTGAAGAAAAAATTCACAAA
TCAGGGATATAGTGATGATAGCTGCTGGGCACGAGGCCAGGCGTGGGGAA
TCATGGGGTTCGCGCAGACATTCGAGTGGACAAGAGAGATGAGATTCCTT
CGCACTGCTAGAGCACTGGCGGATGTATTTCTTGCGAGATTGCCGGATGA
TGGCGTCCCATATTGGGATTTTGATGCGCCTGTTACTGACACCTCCCCAC
GCGATACCTCTGCTGCGATGATCGCTGCCTGTGGGATGTTGTTGCTCTAT
AAGGCTTACAAGAAGCTGCATGATGTTGAGGCGGCTAACCACTACCTTCG
GGCTGCTATGAAGCTGGTTGATTGTACGGTTGTGGGGTATTTGAATCCCC
CTATGCGGTTCGAGGCTGGTCCTGCGTCAGAAATCTCCGTGTACGCAGAC
CAGTGCTCGACGCATCACACTGAGACTCGGAACGGGGCGGAAGTGCTGAG
GGTGGTTGGGGATGTTGCTGAAACTATACTGACGGGCGCAACAATCAATA
ACTATGAGTTTGCTCCGCGAAGGTGGTCGGACCATGGTCTCGTCTATGCT
GATCATTATTTCTTGCTGTTTGGAAATATGCTCCTTGAGATGGACTTGGT
CGATCCTCATATATAAATGTCTATCGAAGCGGGACCCCCAACAACCATCA
ACGGCACCGAAGTACTCCCTACCAAGCAATGGGCGCGAGTACTCGAAGCC
CTCTTCTCAGAATCCCTCCTAGCCAAGGTCTGGTTCGTCGCATCCAAGGC
GATGGGTAGTACAACCCCTCCAACCTTCTACCCCGAATATACCGGCGAAG
ACAAGACCACATATATCTACCGAACCCTTGACTTCTGGACCTCCGGCTTC
TTCCCAGGCTCTTTATACCTCCTTTTAGAACGCAGCACTCTCTTCCGCGA
CCGGCATCTTATTCTCCAACGACAAACCAGCGAATCCATCCTCCACCCCC
ATCCCCTCCAACACGAGCACCTCTGCCGCTGGTGGACAGCAAACCTTCAC
CAAAACGCCCTTCGCAAGGATACTCACGACCTAGGGTTCATGATCACCCC
TTGGGCGATGAAAGCATGGACCCTGCATCGAGACCCAGCAGCCTACAACA
CTCTCATACTAGCAGCCCACTCCCTCGCCAGTCGCTTTAATGAATCAACC
CAGTGTATTCGTAGCTGGGACCAGTGCATCACCAAGCGCTATGCATACAG
AAATTCGTCGCAGGACTTCCTATTTATCATCGACAACATGCTGAACCTGG
ATTTGCTTTTCTGGGCAGCGAGAGAAACAGGCTGTCGGAGGCTTTATGAT
ATAGCCAGGGCTCATGCGATCACTACACAGAAGCATCATATCCGAGATGA
CTATACGACATTTCACGTTGTTGATCTGGACCTGGAGACGGGGGAGGTGA
AGAAAAAATTCACAAATCAGGGATATAGTGATGATAGCTGCTGGGCACGA
GGCCAGGCGTGGGGAATCATGGGGTTCGCGCAGACATTCGAGTGGACAAG
AGAGATGAGATTCCTTCGCACTGCTAGAGCACTGGCGGATGTATTTCTTG
CGAGATTGCCGGATGATGGCGTCCCATATTGGGATTTTGATGCGCCTGTT
ACTGACACCTCCCCACGCGATACCTCTGCTGCGATGATCGCTGCCTGTGG
GATGTTGTTGCTCTATAAGGCTTACAAGAAGCTGCATGATGTTGAGGCGG
CTAACCACTACCTTCGGGCTGCTATGAAGCTGGTTGATTGTACGGTTGTG
GGGTATTTGAATCCCCCTATGCGGTTCGAGGCTGGTCCTGCGTCAGAAAT
CTCCGTGTACGCAGACCAGTGCTCGACGCATCACACTGAGACTCGGAACG
GGGCGGAAGTGCTGAGGGTGGTTGGGGATGTTGCTGAAACTATACTGACG
GGCGCAACAATCAATAACTATGAGTTTGCTCCGCGAAGGTGGTCGGACCA
TGGTCTCGTCTATGCTGATCATTATTTCTTGCTGTTTGGAAATATGCTCC
TTGAGATGGACTTGGTCGATCCTCATATATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004832ATCC10864_004832Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004832-T1.exon1ATCC10864_004832-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004832-T1.exon2ATCC10864_004832-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004832-T1.cdsATCC10864_004832-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004832-T1ATCC10864_004832-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR012341
InterProIPR010905
InterProIPR008928
Properties
Property NameValue
NoteCAZy:GH88
NoteantiSMASH:Cluster_1000110.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000110supercontigMCQH01000110:122052..123531 +
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