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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000110:136050..137704+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_004837-T1 ID=ATCC10864_004837-T1|Name=ATCC10864_004837-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1655bp|location=Sequence derived from alignment at MCQH01000110:136050..137704+ (Aspergillus niger ATCC 10864)
ATGCCATCAGATCCCAGTGATTTGACGGCGTTAAAGCCGCCGACCACAGC
AACGTCACAAGTTGACAGCGAATCTCCGCTGCATGAAACCAAAGTAGTCA
GTCATCGAGATACCGACAGAGATTCCGATGCACATGAGAAATACATCGAT
GGGGTGTTATTGCATGTGATTGTGCTTTGCCTAGCTGTGGCCATGTTCCT
GGTTTCCCTTGACACGACTATTATCTCAACCGCTATTCCTCAGATCACAG
ACGAATTCAACTCCACTGCTGATGTTGGCTGGTATGGAGCTGCATTTCTT
CTGGGAAGCGCTGTAACTCAAGCACCATGGGGAAAACTATACGGATTTTA
CGATATTAAATGGACCTACCTCCTCAGCCTACTCATGTTTGAGTTGGGGT
CTTTGCTTTGTGCTATTTCCCACAACTCCCCAACATTCATAATTGGCAGA
GCAATTGCAGGAATAGGTGGATCAGGCATTGGGTCGGGGATATATACGGT
CATTGGGGTCTGCGTCCCACCCAAAAAAGCCCTATACTGGTTGGCGTAAC
GGGTCTGGCATTCTTGCTCGCCAGCTTTGCCGGCCCCGTTATCGGGGGAG
AATTTACAAGCAACTTAACTTGGAGATGGTGCTTCTGGATCAATGTACCT
GTTGGCGGAGCTACTTTCGCTGTCCTCCTCCCCTTATTTCGGCCACCCTT
TCGACGCGCGAATGTAGGAGTATCACGGAAAGAGATCATCCTCCAGCTCG
ATATACCGGGGGTCATTACATTAACAGGTGCATTACTCTGTTTTCTACTC
AGCCTTGAGTGGGGAGTGAGCAAGTCCTGGCATGATAGAGATGTGATTGG
ATGTCTGGTCGGTTTTCCAATCCTCACAGGGCTGTTCATCACGAATGAAT
TCTTCTGGGATGACCGGGCGATGATTCCACGTCGATTGCTTCTCAAGAAA
GAAGTTATTGTCAATCTCATTGTCATTTTTCTCCTGGTGGGCGCGTTTTT
CATGCTCCTATATTACATGCCCATCTACTTCCAGACAGTCAAAGGTAACT
CAGCCCAGGACTCAGGGATACGCACCCTGCCATTGATCATGTCAGCTGGC
GTTATGGCAGTATTTGGAGCGATAGGGTTTGGTATCAGCGGCTACCCGAC
ACCGTTCTTGCTGTTTGGTGCGATGCTGATCAGTGTAGGAGCCGGACTGC
TATACACGTTGGATCTTGTCACGCTGTCGAGTCACTGGATTCCGTACCAG
ATTTTAGCAGGGCTTGGGATAGGAGCCGCACTTCAGGTACCAATCATTAT
GAACCAGGCTACTGTCGATGCATCGGACATGTCAACCATGACATCTATAA
CCTTGTTCTTCAAATGTCTGGGGGCTTCGGTATTTATGCAGACAGGGCAG
ACCATATTCCTCGAGAAGGTGAAGCGGAATCTGGACATGATGACTGTTGC
CGATGTGAACCCCAACCAAATACTCACCGGAGGCCTTGTGCGTGTACAAG
CCATCGATTCGGCCTCAAGTATAGCACTCCGCACTGCGTACCTTGGAGGT
CTGAAAGATGTATTCTTGTTGGTAGCAGCACTCTCGGGCCTTGTCGCTCT
GCTTGCGTCACTTATGGGTCGATATAAGATGGATACTGCACGACTGCGGC
TATGA back to topCoding sequence (CDS) from alignment at MCQH01000110:136050..137704+ >ATCC10864_004837-T1 ID=ATCC10864_004837-T1|Name=ATCC10864_004837-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2268bp|location=Sequence derived from alignment at MCQH01000110:136050..137704+ (Aspergillus niger ATCC 10864)
ATGCCATCAGATCCCAGTGATTTGACGGCGTTAAAGCCGCCGACCACAGC
AACGTCACAAGTTGACAGCGAATCTCCGCTGCATGAAACCAAAGTAGTCA
GTCATCGAGATACCGACAGAGATTCCGATGCACATGAGAAATACATCGAT
GGGGTGTTATTGCATGTGATTGTGCTTTGCCTAGCTGTGGCCATGTTCCT
GGTTTCCCTTGACACGACTATTATCTCAACCGCTATTCCTCAGATCACAG
ACGAATTCAACTCCACTGCTGATGTTGGCTGCCTTGAGTGGGGAGTGAGC
AAGTCCTGGCATGATAGAGATGTGATTGGATGTCTGGTCGGTTTTCCAAT
CCTCACAGGGCTGTTCATCACGAATGAATTCTTCTGGGATGACCGGGCGA
TGATTCCACGTCGATTGCTTCTCAAGAAAGAAGTTATTGTCAATCTCATT
GTCATTTTTCTCCTGGTGGGCGCGTTTTTCATGCTCCTATATTACATGCC
CATCTACTTCCAGACAGTCAAAGGTAACTCAGCCCAGGACTCAGGGATAC
GCACCCTGCCATTGATCATGTCAGCTGGCGTTATGGCAGTATTTGGAGCG
ATAGGGTTTGGTATCAGCGGCTACCCGACACCGTTCTTGCTGTTTGGTGC
GATGCTGATCAGTGTAGGAGCCGGACTGCTATACACGTTGGATCTTGTCA
CGCTGTCGAGTCACTGGATTCCGTACCAGATTTTAGCAGGGCTTGGGATA
GGAGCCGCACTTCAGGTACCAATCATTATGAACCAGGCTACTGTCGATGC
ATCGGACATGTCAACCATGACATCTATAACCTTGTTCTTCAAATGTCTGG
GGGCTTCGGTATTTATGCAGACAGGGCAGACCATATTCCTCGAGAAGGTG
AAGCGGAATCTGGACATGATGACTGTTGCCGATGTGAACCCCAACCAAAT
ACTCACCGGAGGCCTTGTGCGTGTACAAGCCATCGATTCGGCCTCAAGTA
TAGCACTCCGCACTGCGTACCTTGGAGGTCTGAAAGATGTATTCTTGTTG
GTAGCAGCACTCTCGGGCCTTGTCGCTCTGCTTGCGTCACTTATGGGTCG
ATATAAGATGGATACTGCACGACTGCGGCTATGAATGCCATCAGATCCCA
GTGATTTGACGGCGTTAAAGCCGCCGACCACAGCAACGTCACAAGTTGAC
AGCGAATCTCCGCTGCATGAAACCAAAGTAGTCAGTCATCGAGATACCGA
CAGAGATTCCGATGCACATGAGAAATACATCGATGGGGTGTTATTGCATG
TGATTGTGCTTTGCCTAGCTGTGGCCATGTTCCTGGTTTCCCTTGACACG
ACTATTATCTCAACCGCTATTCCTCAGATCACAGACGAATTCAACTCCAC
TGCTGATGTTGGCTGCCTTGAGTGGGGAGTGAGCAAGTCCTGGCATGATA
GAGATGTGATTGGATGTCTGGTCGGTTTTCCAATCCTCACAGGGCTGTTC
ATCACGAATGAATTCTTCTGGGATGACCGGGCGATGATTCCACGTCGATT
GCTTCTCAAGAAAGAAGTTATTGTCAATCTCATTGTCATTTTTCTCCTGG
TGGGCGCGTTTTTCATGCTCCTATATTACATGCCCATCTACTTCCAGACA
GTCAAAGGTAACTCAGCCCAGGACTCAGGGATACGCACCCTGCCATTGAT
CATGTCAGCTGGCGTTATGGCAGTATTTGGAGCGATAGGGTTTGGTATCA
GCGGCTACCCGACACCGTTCTTGCTGTTTGGTGCGATGCTGATCAGTGTA
GGAGCCGGACTGCTATACACGTTGGATCTTGTCACGCTGTCGAGTCACTG
GATTCCGTACCAGATTTTAGCAGGGCTTGGGATAGGAGCCGCACTTCAGG
TACCAATCATTATGAACCAGGCTACTGTCGATGCATCGGACATGTCAACC
ATGACATCTATAACCTTGTTCTTCAAATGTCTGGGGGCTTCGGTATTTAT
GCAGACAGGGCAGACCATATTCCTCGAGAAGGTGAAGCGGAATCTGGACA
TGATGACTGTTGCCGATGTGAACCCCAACCAAATACTCACCGGAGGCCTT
GTGCGTGTACAAGCCATCGATTCGGCCTCAAGTATAGCACTCCGCACTGC
GTACCTTGGAGGTCTGAAAGATGTATTCTTGTTGGTAGCAGCACTCTCGG
GCCTTGTCGCTCTGCTTGCGTCACTTATGGGTCGATATAAGATGGATACT
GCACGACTGCGGCTATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR036259 |
| InterPro | IPR011701 |
Properties
| Property Name | Value |
|---|
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| Note | antiSMASH:Cluster_1000110.1 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000110 | supercontig | MCQH01000110:136050..137704 + |
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