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ATCC10864_004854-T1, ATCC10864_004854-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004854-T1
Unique NameATCC10864_004854-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000130:5859..6825-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004854-T1 ID=ATCC10864_004854-T1|Name=ATCC10864_004854-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=967bp|location=Sequence derived from alignment at MCQH01000130:5859..6825- (Aspergillus niger ATCC 10864)
ATGGCCACCGAACTTTGGTACGTAATCACCTCACCTACTCCTTTTCCCAG
CATCCCAACCATTGTGCCCTCTTGTATCTCGACTTTAATAATGTTACGGA
TGATTCTCGACTTGATATACTGACATATGGACTTGATAGCCCCGTTTACG
CAGTAAGTCACTTGTGATCCCACCCTCACCGATGACACCATCGAGCTCCA
AGCGACCCTCAAGGTAGCTTGGCTTCGTTGCATCAAGCGGAGAATCTGCC
ATCGAACAAGCATCTCTCGACACGGTTAACTGATCTCCAACTTGTATAGC
CCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTCTTCACCTGCTTC
GGAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGTCTGTGGAATGGC
CGTCCTCAGACCTGACCTGATCGTCAAGAGTACGTGGAAGCTTCACAGAG
CTTTATACCACTGGGATATGCCATCGCATATAATTTCGGATGATGTGATA
CTAATCTCGTGATACAGACATTGTCCCCATTGTCATGGCGGGTATCATTG
GTATCTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGACAG
AAGGTCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCCGT
CGGTTTGGCTGGTATGGCAGCTGGGTAAGCTTCTCAACATGGCACCTTTC
AGTTCCGGTAAGCTTGGGACTAATTCAGTATCTCTAGTTTTGCCATTGGT
ATCGTTGGTGACGCAGGTGTTCGTGGAACTGCTCAACAGCCCCGTCTCTA
TGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGTCTTGGGTGAGTCAC
AACAACATAGCGATATAATTGGTCTGCCCCATCTAACAAGGATGTCTTAC
AGGTCTGTACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGA
TCGACGCCACTTGCTAA
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Coding sequence (CDS) from alignment at MCQH01000130:5859..6825-

>ATCC10864_004854-T1 ID=ATCC10864_004854-T1|Name=ATCC10864_004854-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3510bp|location=Sequence derived from alignment at MCQH01000130:5859..6825- (Aspergillus niger ATCC 10864)
GTCTGTACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGATC
GACGCCACTTGCTAATTTTGCCATTGGTATCGTTGGTGACGCAGGTGTTC
GTGGAACTGCTCAACAGCCCCGTCTCTATGTCGGAATGATTTTGATTCTC
ATTTTCGCTGAAGTCTTGGACATTGTCCCCATTGTCATGGCGGGTATCAT
TGGTATCTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGAC
AGAAGGTCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCC
GTCGGTTTGGCTGGTATGGCAGCTGGCCCTTTTTCGGTGCCCTTGGCTGC
ACCTCGGCCATCGTCTTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAA
GGCTGGTGTCGGTGTCTGTGGAATGGCCGTCCTCAGACCTGACCTGATCG
TCAAGATCACTTGTGATCCCACCCTCACCGATGACACCATCGAGCTCCAA
GCGACCCTCAAGATGGCCACCGAACTTTGGTACGTAATCACCTCACCTAC
TCCTTTTCCCAGCATCCCAACCATTGTGCCCTCTTGTCTGTACGGTCTTA
TCGTTGCTCTTCTGATGAACTCCCGTTCGAGGATCGACGCCACTTGCTAA
TTTTGCCATTGGTATCGTTGGTGACGCAGGTGTTCGTGGAACTGCTCAAC
AGCCCCGTCTCTATGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGTC
TTGGACATTGTCCCCATTGTCATGGCGGGTATCATTGGTATCTACGGTCT
GGTCGTGTCGGTCCTGATTGCAAACGATTTGGGACAGAAGGTCCCCTTGT
ACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCCGTCGGTTTGGCTGGT
ATGGCAGCTGGCCCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTC
TTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGT
CTGTGGAATGGCCGTCCTCAGACCTGACCTGATCGTCAAGATCACTTGTG
ATCCCACCCTCACCGATGACACCATCGAGCTCCAAGCGACCCTCAAGATG
GCCACCGAACTTTGGTACGTAATCACCTCACCTACTCCTTTTCCCAGCAT
CCCAACCATTGTGCCCTCTTGTCTGTACGGTCTTATCGTTGCTCTTCTGA
TGAACTCCCGTTCGAGGATCGACGCCACTTGCTAATTTTGCCATTGGTAT
CGTTGGTGACGCAGGTGTTCGTGGAACTGCTCAACAGCCCCGTCTCTATG
TCGGAATGATTTTGATTCTCATTTTCGCTGAAGTCTTGGACATTGTCCCC
ATTGTCATGGCGGGTATCATTGGTATCTACGGTCTGGTCGTGTCGGTCCT
GATTGCAAACGATTTGGGACAGAAGGTCCCCTTGTACACTGGTTTCATTC
AGCTGGGAGCAGGTCTCGCCGTCGGTTTGGCTGGTATGGCAGCTGGCCCT
TTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTCTTCACCTGCTTCGGA
GCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGTCTGTGGAATGGCCGT
CCTCAGACCTGACCTGATCGTCAAGATCACTTGTGATCCCACCCTCACCG
ATGACACCATCGAGCTCCAAGCGACCCTCAAGATGGCCACCGAACTTTGG
TACGTAATCACCTCACCTACTCCTTTTCCCAGCATCCCAACCATTGTGCC
CTCTTGTCTGTACGGTCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGA
GGATCGACGCCACTTGCTAATTTTGCCATTGGTATCGTTGGTGACGCAGG
TGTTCGTGGAACTGCTCAACAGCCCCGTCTCTATGTCGGAATGATTTTGA
TTCTCATTTTCGCTGAAGTCTTGGACATTGTCCCCATTGTCATGGCGGGT
ATCATTGGTATCTACGGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTT
GGGACAGAAGGTCCCCTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTC
TCGCCGTCGGTTTGGCTGGTATGGCAGCTGGCCCTTTTTCGGTGCCCTTG
GCTGCACCTCGGCCATCGTCTTCACCTGCTTCGGAGCTGCCTATGGAACT
GCCAAGGCTGGTGTCGGTGTCTGTGGAATGGCCGTCCTCAGACCTGACCT
GATCGTCAAGATCACTTGTGATCCCACCCTCACCGATGACACCATCGAGC
TCCAAGCGACCCTCAAGATGGCCACCGAACTTTGGTACGTAATCACCTCA
CCTACTCCTTTTCCCAGCATCCCAACCATTGTGCCCTCTTGTCTGTACGG
TCTTATCGTTGCTCTTCTGATGAACTCCCGTTCGAGGATCGACGCCACTT
GCTAATTTTGCCATTGGTATCGTTGGTGACGCAGGTGTTCGTGGAACTGC
TCAACAGCCCCGTCTCTATGTCGGAATGATTTTGATTCTCATTTTCGCTG
AAGTCTTGGACATTGTCCCCATTGTCATGGCGGGTATCATTGGTATCTAC
GGTCTGGTCGTGTCGGTCCTGATTGCAAACGATTTGGGACAGAAGGTCCC
CTTGTACACTGGTTTCATTCAGCTGGGAGCAGGTCTCGCCGTCGGTTTGG
CTGGTATGGCAGCTGGCCCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCA
TCGTCTTCACCTGCTTCGGAGCTGCCTATGGAACTGCCAAGGCTGGTGTC
GGTGTCTGTGGAATGGCCGTCCTCAGACCTGACCTGATCGTCAAGATCAC
TTGTGATCCCACCCTCACCGATGACACCATCGAGCTCCAAGCGACCCTCA
AGATGGCCACCGAACTTTGGTACGTAATCACCTCACCTACTCCTTTTCCC
AGCATCCCAACCATTGTGCCCTCTTGTCTGTACGGTCTTATCGTTGCTCT
TCTGATGAACTCCCGTTCGAGGATCGACGCCACTTGCTAATTTTGCCATT
GGTATCGTTGGTGACGCAGGTGTTCGTGGAACTGCTCAACAGCCCCGTCT
CTATGTCGGAATGATTTTGATTCTCATTTTCGCTGAAGTCTTGGACATTG
TCCCCATTGTCATGGCGGGTATCATTGGTATCTACGGTCTGGTCGTGTCG
GTCCTGATTGCAAACGATTTGGGACAGAAGGTCCCCTTGTACACTGGTTT
CATTCAGCTGGGAGCAGGTCTCGCCGTCGGTTTGGCTGGTATGGCAGCTG
GCCCTTTTTCGGTGCCCTTGGCTGCACCTCGGCCATCGTCTTCACCTGCT
TCGGAGCTGCCTATGGAACTGCCAAGGCTGGTGTCGGTGTCTGTGGAATG
GCCGTCCTCAGACCTGACCTGATCGTCAAGATCACTTGTGATCCCACCCT
CACCGATGACACCATCGAGCTCCAAGCGACCCTCAAGATGGCCACCGAAC
TTTGGTACGTAATCACCTCACCTACTCCTTTTCCCAGCATCCCAACCATT
GTGCCCTCTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033179proton-transporting V-type ATPase, V0 domain
GO:0033177proton-transporting two-sector ATPase complex, proton-transporting domain
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA3_1ATCC10864_004854Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004854-T1ATCC10864_004854-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004854-T1.cdsATCC10864_004854-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004854-T1.exon6ATCC10864_004854-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_004854-T1.exon5ATCC10864_004854-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_004854-T1.exon4ATCC10864_004854-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004854-T1.exon3ATCC10864_004854-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004854-T1.exon2ATCC10864_004854-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004854-T1.exon1ATCC10864_004854-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR002379
InterProIPR000245
InterProIPR035921
PFAMPF00137
InterProIPR011555
Properties
Property NameValue
ProductH( )-transporting V0 sector ATPase subunit c
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000130supercontigMCQH01000130:5859..6825 -
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