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ATCC10864_004901-T1, ATCC10864_004901-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004901-T1
Unique NameATCC10864_004901-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000130:132318..133129-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004901-T1 ID=ATCC10864_004901-T1|Name=ATCC10864_004901-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=812bp|location=Sequence derived from alignment at MCQH01000130:132318..133129- (Aspergillus niger ATCC 10864)
ATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGATTTTTGGTACGAAGGA
GATGCGGATTTTGATGCTGGGTTTGGATGCTGCTGGAAAGACCAGTAAGT
TTGATCCTCGATCTCCGTCCACCCATCGACTATGGCAATGTAAAAACTAA
CATGTTGCGTTAGCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGT
CACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGA
ATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCC
CTCTGGAGACACTACTATTCTGGTACTTTTCCCCTTATCGCGTATTTTCA
ACGAATCGTGGGGCAAGTGGCTGACATTGGGTGAAATCTTCAGGTACACA
AGGTTTGATCTTCGTTGTGGACTCCAGCGACACTGCTCGTTTGGAGGAGG
CTCGCTCCGAGCTTCACAAGATTATCAACGATCGCGAAATGAAGGATGCT
CTCTTGCTGGTCTTTGCCAATAAGCAGGATGTTCAAGGCCGTAAGTTTCC
ACCTTTAGGTTATAGATATCGACGTCGCGACTGACCAGGATTTTTCTTGC
AGACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGA
AGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGT
ATCTTCGAGGGCCTGGTAAGTTACACGCCCCCTCATTATTGCTTTGCCAT
CTAACGATCGATTGTCGCAGGCATGGCTCTCCAACAACGTGAAGACGCAA
CCCCAGAAATAA
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Coding sequence (CDS) from alignment at MCQH01000130:132318..133129-

>ATCC10864_004901-T1 ID=ATCC10864_004901-T1|Name=ATCC10864_004901-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2775bp|location=Sequence derived from alignment at MCQH01000130:132318..133129- (Aspergillus niger ATCC 10864)
GCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAATAAACATGAGT
CCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGAAGGATAAGCT
GTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGTATCTTCGAGG
GCCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGCGACACTGCTC
GTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAACGATCGCGAA
ATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGGATGTTCAAGG
CCCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTCACCACTATCC
CTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAATGTGAAGTTC
AATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCCTCTGGAGACA
CTACTATTCTGATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGATTTTT
GGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATGCTGCTGGAAA
GACCAGCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAATAAACA
TGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGAAGGAT
AAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGTATCTT
CGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGCGACAC
TGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAACGATC
GCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGGATGTT
CAAGGCCCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTCACCAC
TATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAATGTGA
AGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCCTCTGG
AGACACTACTATTCTGATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGA
TTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATGCTGCT
GGAAAGACCAGCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGAAAT
AAACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGA
AGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGT
ATCTTCGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGC
GACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAA
CGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGG
ATGTTCAAGGCCCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTC
ACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAA
TGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCC
TCTGGAGACACTACTATTCTGATGGGTGGTCAGGTTTCCAAGATTATGGG
GAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATG
CTGCTGGAAAGACCAGCATGGCTCTCCAACAACGTGAAGACGCAACCCCA
GAAATAAACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAA
GTTGAAGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAA
CTGGTATCTTCGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGTGGACT
CCAGCGACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATT
ATCAACGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAA
GCAGGATGTTCAAGGCCCAATCCTCTACAAATTGAAGCTCACCAATCAGG
ACGTCACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTAT
AAGAATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAG
ACCCCTCTGGAGACACTACTATTCTGATGGGTGGTCAGGTTTCCAAGATT
ATGGGGAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTT
GGATGCTGCTGGAAAGACCAGCATGGCTCTCCAACAACGTGAAGACGCAA
CCCCAGAAATAAACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTC
ACCAAGTTGAAGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGA
GGGAACTGGTATCTTCGAGGGCCTGGTACACAAGGTTTGATCTTCGTTGT
GGACTCCAGCGACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACA
AGATTATCAACGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCC
AATAAGCAGGATGTTCAAGGCCCAATCCTCTACAAATTGAAGCTCACCAA
TCAGGACGTCACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCA
CCTATAAGAATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAG
ATCAGACCCCTCTGGAGACACTACTATTCTGATGGGTGGTCAGGTTTCCA
AGATTATGGGGAAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTG
GGTTTGGATGCTGCTGGAAAGACCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARF6ATCC10864_004901Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004901-T1ATCC10864_004901-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004901-T1.cdsATCC10864_004901-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004901-T1.exon5ATCC10864_004901-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_004901-T1.exon4ATCC10864_004901-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_004901-T1.exon3ATCC10864_004901-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_004901-T1.exon2ATCC10864_004901-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004901-T1.exon1ATCC10864_004901-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF09439
InterProIPR041838
InterProIPR027417
PFAMPF00025
PFAMPF00071
PFAMPF04670
PFAMPF08477
PFAMPF01926
InterProIPR005225
InterProIPR006689
Properties
Property NameValue
Product Arf Arf6
ProductADP-ribosylation factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000130supercontigMCQH01000130:132318..133129 -
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