You are here

Home

ATCC10864_004905-T1, ATCC10864_004905-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004905-T1
Unique NameATCC10864_004905-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000130:139806..141388-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004905-T1 ID=ATCC10864_004905-T1|Name=ATCC10864_004905-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1583bp|location=Sequence derived from alignment at MCQH01000130:139806..141388- (Aspergillus niger ATCC 10864)
ATGGGTCCCGAAGAACGCCTTAGGCTGCTTTTTGCGCGGGATGAAGACCT
CTTGAAGATGGACACTGGCCGCCGTCAGGCAACCGAATCTCGGCCCGTTG
ATGACACTGGTGGCCCTCAGACAGAGCATACCGAGAACCTGGGAAACAAG
CCTTCAGCTATAACTACCCAGAACACAACTCAACCCACTCAGATTGCGTC
TCCTGAACTCCCTTCTCCACCCAAGCTCCCTGCTCCAGCCCCGGCAGGTG
ACTCTCAATATGAACACGTATTTCCTCTCAACGGCCAGTTCAGCCCCCTT
TTGGCTATTGCCAAATATCCCTACAGACATATAAAAGGATCCTTGAGCCA
AGAGGTTTCCAGCCGCTTCTTCGACGCAGGTAAATTCTGGAACCGCTCGT
GGGATGTGTAAGTTGCTCTATTCACAGCTTTGCACAAGTAAATCTGATAA
GTGCCAGTTATTTTGTCCACGCACCAGCTTCTCTCGGATCTAAGCCTGTA
CTCCTTACTCCCACCGATGGAGTCAGTTCCTTCTTGGAAGAGATAAATCG
TGCTCTGAAGTGTGAATTGTCGTTGCCAGCAGATATGTCCGCCGGGCTTG
TCTTGTCTTTCAAAGATGGGTATCCTCAGCCTGTCTACCTCGGCCGCAGT
ACCACACGTGAGACCAAGGACCAGCTCGAGTTGCAAATTCCTTCACCATC
ATCGGAGCACAACAGTTCTTCTGGAGACATGGACGAGGAATACGCTGCTT
TCGAGACCATGGTGGAAGCCGCTATCGAGGCCACCAGGAACAAAAAGAAA
TCTTCCAAGCAGAAACTGTTGATGCGTGCGATGAAAGAGCTTGATATGCA
GCAGATGGTTCGACGGATGCAGTGCTACTTTGGTTTGCGTTCGATGGATG
ACATTGAAGGGACAGCAGACATGGGTGACTGGGATACCCCGGGCACAGTG
CCCACAGTGCAGCCGCTAGATGCCACCAAGGCAGTACCGTATCCTTTCTG
GAGAGAGCCCGTGTTTATCAGTATCGACGTAGAGTCGAATGAGCGCTGCC
ATAGCCAGGTGACTGAGGTCGGAGTGTCAGTGTTGGACATGCGGAGTCTG
GTGGGGGTTCCGCCGGGCGTGAACGGCGATCAGTGGCGGAGCCGTATCCA
GTCCCGGCATCTACGAGTGAGAGAATACGGCCATATCGTGAACCATGAGT
TCGTGTCGGGCTGTCCTGGCATGTTTCAGTTCGGAGAGAGCGAATGGGTG
CTGCAACGAGACTTGGTGGACGTAGTGCGATCAAGCCTGCGCTTGGGCGA
TGCACTGGACCGTCGCCTCGTATTGGTCGGCCACAATCTTTCAGCAGATG
TCAAGTATCTCAAGCAAGTTGGGGTGGATGTGGGAGGGTTTCGTGACCAG
ATCGACACAGCGCAGATGTTTCGCAAGCTGCGGAAGGAAGAGTCGGTACG
GTCGCTGGGAGGCGTGCTGGCGAAACTGGACATTAAGGGCTGGTACTTGC
ACAATGCCGGGAATGATGCGCGGTACACTATGGAGGTTCTCGTCGCCAGC
TTTATGGGAGCGAGTGAGGAAGACTCAGCGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000130:139806..141388-

>ATCC10864_004905-T1 ID=ATCC10864_004905-T1|Name=ATCC10864_004905-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3066bp|location=Sequence derived from alignment at MCQH01000130:139806..141388- (Aspergillus niger ATCC 10864)
TTATTTTGTCCACGCACCAGCTTCTCTCGGATCTAAGCCTGTACTCCTTA
CTCCCACCGATGGAGTCAGTTCCTTCTTGGAAGAGATAAATCGTGCTCTG
AAGTGTGAATTGTCGTTGCCAGCAGATATGTCCGCCGGGCTTGTCTTGTC
TTTCAAAGATGGGTATCCTCAGCCTGTCTACCTCGGCCGCAGTACCACAC
GTGAGACCAAGGACCAGCTCGAGTTGCAAATTCCTTCACCATCATCGGAG
CACAACAGTTCTTCTGGAGACATGGACGAGGAATACGCTGCTTTCGAGAC
CATGGTGGAAGCCGCTATCGAGGCCACCAGGAACAAAAAGAAATCTTCCA
AGCAGAAACTGTTGATGCGTGCGATGAAAGAGCTTGATATGCAGCAGATG
GTTCGACGGATGCAGTGCTACTTTGGTTTGCGTTCGATGGATGACATTGA
AGGGACAGCAGACATGGGTGACTGGGATACCCCGGGCACAGTGCCCACAG
TGCAGCCGCTAGATGCCACCAAGGCAGTACCGTATCCTTTCTGGAGAGAG
CCCGTGTTTATCAGTATCGACGTAGAGTCGAATGAGCGCTGCCATAGCCA
GGTGACTGAGGTCGGAGTGTCAGTGTTGGACATGCGGAGTCTGGTGGGGG
TTCCGCCGGGCGTGAACGGCGATCAGTGGCGGAGCCGTATCCAGTCCCGG
CATCTACGAGTGAGAGAATACGGCCATATCGTGAACCATGAGTTCGTGTC
GGGCTGTCCTGGCATGTTTCAGTTCGGAGAGAGCGAATGGGTGCTGCAAC
GAGACTTGGTGGACGTAGTGCGATCAAGCCTGCGCTTGGGCGATGCACTG
GACCGTCGCCTCGTATTGGTCGGCCACAATCTTTCAGCAGATGTCAAGTA
TCTCAAGCAAGTTGGGGTGGATGTGGGAGGGTTTCGTGACCAGATCGACA
CAGCGCAGATGTTTCGCAAGCTGCGGAAGGAAGAGTCGGTACGGTCGCTG
GGAGGCGTGCTGGCGAAACTGGACATTAAGGGCTGGTACTTGCACAATGC
CGGGAATGATGCGCGGTACACTATGGAGGTTCTCGTCGCCAGCTTTATGG
GAGCGAGTGAGGAAGACTCAGCGTAGATGGGTCCCGAAGAACGCCTTAGG
CTGCTTTTTGCGCGGGATGAAGACCTCTTGAAGATGGACACTGGCCGCCG
TCAGGCAACCGAATCTCGGCCCGTTGATGACACTGGTGGCCCTCAGACAG
AGCATACCGAGAACCTGGGAAACAAGCCTTCAGCTATAACTACCCAGAAC
ACAACTCAACCCACTCAGATTGCGTCTCCTGAACTCCCTTCTCCACCCAA
GCTCCCTGCTCCAGCCCCGGCAGGTGACTCTCAATATGAACACGTATTTC
CTCTCAACGGCCAGTTCAGCCCCCTTTTGGCTATTGCCAAATATCCCTAC
AGACATATAAAAGGATCCTTGAGCCAAGAGGTTTCCAGCCGCTTCTTCGA
CGCAGGTAAATTCTGGAACCGCTCGTGGGATGTTTATTTTGTCCACGCAC
CAGCTTCTCTCGGATCTAAGCCTGTACTCCTTACTCCCACCGATGGAGTC
AGTTCCTTCTTGGAAGAGATAAATCGTGCTCTGAAGTGTGAATTGTCGTT
GCCAGCAGATATGTCCGCCGGGCTTGTCTTGTCTTTCAAAGATGGGTATC
CTCAGCCTGTCTACCTCGGCCGCAGTACCACACGTGAGACCAAGGACCAG
CTCGAGTTGCAAATTCCTTCACCATCATCGGAGCACAACAGTTCTTCTGG
AGACATGGACGAGGAATACGCTGCTTTCGAGACCATGGTGGAAGCCGCTA
TCGAGGCCACCAGGAACAAAAAGAAATCTTCCAAGCAGAAACTGTTGATG
CGTGCGATGAAAGAGCTTGATATGCAGCAGATGGTTCGACGGATGCAGTG
CTACTTTGGTTTGCGTTCGATGGATGACATTGAAGGGACAGCAGACATGG
GTGACTGGGATACCCCGGGCACAGTGCCCACAGTGCAGCCGCTAGATGCC
ACCAAGGCAGTACCGTATCCTTTCTGGAGAGAGCCCGTGTTTATCAGTAT
CGACGTAGAGTCGAATGAGCGCTGCCATAGCCAGGTGACTGAGGTCGGAG
TGTCAGTGTTGGACATGCGGAGTCTGGTGGGGGTTCCGCCGGGCGTGAAC
GGCGATCAGTGGCGGAGCCGTATCCAGTCCCGGCATCTACGAGTGAGAGA
ATACGGCCATATCGTGAACCATGAGTTCGTGTCGGGCTGTCCTGGCATGT
TTCAGTTCGGAGAGAGCGAATGGGTGCTGCAACGAGACTTGGTGGACGTA
GTGCGATCAAGCCTGCGCTTGGGCGATGCACTGGACCGTCGCCTCGTATT
GGTCGGCCACAATCTTTCAGCAGATGTCAAGTATCTCAAGCAAGTTGGGG
TGGATGTGGGAGGGTTTCGTGACCAGATCGACACAGCGCAGATGTTTCGC
AAGCTGCGGAAGGAAGAGTCGGTACGGTCGCTGGGAGGCGTGCTGGCGAA
ACTGGACATTAAGGGCTGGTACTTGCACAATGCCGGGAATGATGCGCGGT
ACACTATGGAGGTTCTCGTCGCCAGCTTTATGGGAGCGAGTGAGGAAGAC
TCAGCGTAGATGGGTCCCGAAGAACGCCTTAGGCTGCTTTTTGCGCGGGA
TGAAGACCTCTTGAAGATGGACACTGGCCGCCGTCAGGCAACCGAATCTC
GGCCCGTTGATGACACTGGTGGCCCTCAGACAGAGCATACCGAGAACCTG
GGAAACAAGCCTTCAGCTATAACTACCCAGAACACAACTCAACCCACTCA
GATTGCGTCTCCTGAACTCCCTTCTCCACCCAAGCTCCCTGCTCCAGCCC
CGGCAGGTGACTCTCAATATGAACACGTATTTCCTCTCAACGGCCAGTTC
AGCCCCCTTTTGGCTATTGCCAAATATCCCTACAGACATATAAAAGGATC
CTTGAGCCAAGAGGTTTCCAGCCGCTTCTTCGACGCAGGTAAATTCTGGA
ACCGCTCGTGGGATGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004905ATCC10864_004905Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004905-T1ATCC10864_004905-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004905-T1.cdsATCC10864_004905-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004905-T1.exon2ATCC10864_004905-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004905-T1.exon1ATCC10864_004905-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR012337
InterProIPR036397
InterProIPR040151
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000130supercontigMCQH01000130:139806..141388 -
Powered by Drupal