You are here

Home

ATCC10864_004910-T1, ATCC10864_004910-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004910-T1
Unique NameATCC10864_004910-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000130:154377..156408+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004910-T1 ID=ATCC10864_004910-T1|Name=ATCC10864_004910-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2032bp|location=Sequence derived from alignment at MCQH01000130:154377..156408+ (Aspergillus niger ATCC 10864)
ATGGCTCCACGAGACTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTT
CTCCCTCCGCACTCGGCCTCGAACTGCTACGACCTCAACCGCTCATACAA
CCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA
GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCC
TGTCCCTAGGCGCCGTGAAGCAAAGAGCTTCTCTAGCTTACGCCATCCCG
TGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC
AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTC
CTGGTGCAATGAAACTAGCATTAATCGTCGACCATCCCTGGAAAGCATCT
CCGCGCTGCACGGTTTCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAAT
GGCCTGGAGCCACCTGTTTTCTCGAATGACATTTATGCGGGAGCGGCAGC
TCGCGCTGCAGCTGCAGCTCAGAATGAGCTGGCAAGAGCTCTGCGGGACA
GTATCAAGCTCTCGGATGCGAGATTGACTCAAGACTCGGAAAGTGGCATT
GGAATCGATCTACGCGATCGCTCAGAGCTATCTGACCCAGCCCTGGCTAT
AGTACGGATTGATCCTGTTGGCTGCCTTCCTCCTGAGGTCATGTCACAAG
TGTTCTCCTACCTCGATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCT
CGTGCTTGGAGTGAGCAGGCATCCTCCCGGCACATCTGGCGGCACGTGTT
CCGCCATACTTACGGACAACACCCTAGCGGGCTCCCTTTCAAGAAGAGAC
AATCTGCTGGTTTGGGTAAGACTCATCCCAAGCAGGATTGGAAGCGGATG
TTCCTGGTTCGCCGTGCTTTGGAACATCGGTGGAAGGAAGGAAAGGCCGC
TGCTATCTACCTTCATGGCCATAAGGACAGTGTCTACTGTGCGCAATTTG
ATGAGTAAGTTACTCGTTGGTAAACATCTGCATATAAGCTCTTTTTAATT
ATACCCCAGGGATAAAATCATCACTGGCTCTCGCGATCGAACCATTCGTG
TATGGGACGCTCATTACCCTTGGCCATGCCGGAAGATCATTGGCCCTCCC
CCGGGCGATGTCTCCGGTATTGGTCCGGTCAATAACCCGGCGCAGCAATC
AGCCGGAAAGCCGCCCTTCTTGACCATCTGCCCCCCGCCGACGCGTTCTG
CGGGGATCATGGCTCCCATTGAGCACAGCGCAGACTATCACAGTGCTTCC
ATTCTCTGCCTCCAGTTTGACGAAGAAATCATGGTCACCGGTTCGTCTGA
TTTTACCTGCATTGTGTGGGATATCAAGAACGACTACAAGCCGATTCGTC
GCCTTGTGGGCCATCAGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGG
TACATTGTGTCCTGCTCCAAAGACACTACAATTTGTGTGTGGGATCGGCA
CACAGGGGCCTTGGTGAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACG
CTGTTCAGCTGCGCGGAGATCTTGTCGTTTCTGCAAGCGGGGACGGCGTC
GCCAAGCTCTGGAACATCACTTCTGGCCTTTGTGTCAAGGAGTTTCCCAG
CAAGGACCGTGGACTGGCATGTGTTGAATTCAGCGATGATGCTCGAACCA
TTCTCACTGGCGGCAACGATCAAGTGATCTATCAGTTTGACGCCAATACC
GGCGACATGGTCAATGAGCTCAAGGGCCACGCGGGCTTGGTTCGCTCCTT
GCACCTCGACAGTATGAACCAAAGAATCGTCAGTGGTAGCTATGACATGA
GTGTTAAAGTATTCGATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCG
GGCTGGACAACGAGCTGGATGCTCAGCGTCAAGTCCGATTATCGGCGCAT
TGTGGCTACCAGCCAAGACTCTCGCGCTGTCATAATGGATTTTGGATACG
GACTAGATGGCATAGACTTGCTGAAAGAGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000130:154377..156408+

>ATCC10864_004910-T1 ID=ATCC10864_004910-T1|Name=ATCC10864_004910-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3954bp|location=Sequence derived from alignment at MCQH01000130:154377..156408+ (Aspergillus niger ATCC 10864)
ATGGCTCCACGAGACTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTT
CTCCCTCCGCACTCGGCCTCGAACTGCTACGACCTCAACCGCTCATACAA
CCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA
GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCC
TGTCCCTAGGCGCCGTGAAGCAAAGAGCTTCTCTAGCTTACGCCATCCCG
TGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC
AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTC
CTGGTGCAATGAAACTAGCATTAATCGTCGACCATCCCTGGAAAGCATCT
CCGCGCTGCACGGTTTCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAAT
GGCCTGGAGCCACCTGTTTTCTCGAATGACATTTATGCGGGAGCGGCAGC
TCGCGCTGCAGCTGCAGCTCAGAATGAGCTGGCAAGAGCTCTGCGGGACA
GTATCAAGCTCTCGGATGCGAGATTGACTCAAGACTCGGAAAGTGGCATT
GGAATCGATCTACGCGATCGCTCAGAGCTATCTGACCCAGCCCTGGCTAT
AGTACGGATTGATCCTGTTGGCTGCCTTCCTCCTGAGGTCATGTCACAAG
TGTTCTCCTACCTCGATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCT
CGTGCTTGGAGTGAGCAGGCATCCTCCCGGCACATCTGGCGGCACGTGTT
CCGCCATACTTACGGACAACACCCTAGCGGGCTCCCTTTCAAGAAGAGAC
AATCTGCTGGTTTGGGTAAGACTCATCCCAAGCAGGATTGGAAGCGGATG
TTCCTGGTTCGCCGTGCTTTGGAACATCGGTGGAAGGAAGGAAAGGCCGC
TGCTATCTACCTTCATGGCCATAAGGACAGTGTCTACTGTGCGCAATTTG
ATGAGGATAAAATCATCACTGGCTCTCGCGATCGAACCATTCGTGTATGG
GACGCTCATTACCCTTGGCCATGCCGGAAGATCATTGGCCCTCCCCCGGG
CGATGTCTCCGGTATTGGTCCGGTCAATAACCCGGCGCAGCAATCAGCCG
GAAAGCCGCCCTTCTTGACCATCTGCCCCCCGCCGACGCGTTCTGCGGGG
ATCATGGCTCCCATTGAGCACAGCGCAGACTATCACAGTGCTTCCATTCT
CTGCCTCCAGTTTGACGAAGAAATCATGGTCACCGGTTCGTCTGATTTTA
CCTGCATTGTGTGGGATATCAAGAACGACTACAAGCCGATTCGTCGCCTT
GTGGGCCATCAGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGGTACAT
TGTGTCCTGCTCCAAAGACACTACAATTTGTGTGTGGGATCGGCACACAG
GGGCCTTGGTGAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACGCTGTT
CAGCTGCGCGGAGATCTTGTCGTTTCTGCAAGCGGGGACGGCGTCGCCAA
GCTCTGGAACATCACTTCTGGCCTTTGTGTCAAGGAGTTTCCCAGCAAGG
ACCGTGGACTGGCATGTGTTGAATTCAGCGATGATGCTCGAACCATTCTC
ACTGGCGGCAACGATCAAGTGATCTATCAGTTTGACGCCAATACCGGCGA
CATGGTCAATGAGCTCAAGGGCCACGCGGGCTTGGTTCGCTCCTTGCACC
TCGACAGTATGAACCAAAGAATCGTCAGTGGTAGCTATGACATGAGTGTT
AAAGTATTCGATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCGGGCTG
GACAACGAGCTGGATGCTCAGCGTCAAGTCCGATTATCGGCGCATTGTGG
CTACCAGCCAAGACTCTCGCGCTGTCATAATGGATTTTGGATACGGACTA
GATGGCATAGACTTGCTGAAAGAGTAAATGGCTCCACGAGACTCTAGCAC
TATTACGTCCCGTCGACGCCCCTCTTTCTCCCTCCGCACTCGGCCTCGAA
CTGCTACGACCTCAACCGCTCATACAACCGGATTGGAACATGACGTGTGG
CACGGGCTGTCTGTGGTGGATTCGGGAGATGATGATGACGGCCAGGTCGT
GGAGGATATGAACCATTTTCCAGAGCCTGTCCCTAGGCGCCGTGAAGCAA
AGAGCTTCTCTAGCTTACGCCATCCCGTGGACGGTCTGCGAGCTCTGGGT
CGTCGCCTCTCGGTGACGCTCCGCAACAAGTCGTCCAGGCATTCTGTTCA
TCCTCAACCAGAAACCATGAGAAATTCCTGGTGCAATGAAACTAGCATTA
ATCGTCGACCATCCCTGGAAAGCATCTCCGCGCTGCACGGTTTCTACGCC
CATGCTGGCGCCCCTGTTCCTGGAAATGGCCTGGAGCCACCTGTTTTCTC
GAATGACATTTATGCGGGAGCGGCAGCTCGCGCTGCAGCTGCAGCTCAGA
ATGAGCTGGCAAGAGCTCTGCGGGACAGTATCAAGCTCTCGGATGCGAGA
TTGACTCAAGACTCGGAAAGTGGCATTGGAATCGATCTACGCGATCGCTC
AGAGCTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCCTGTTGGCT
GCCTTCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCGATCCCGAG
TCCCTTATGCAGTCTGAGCTGGTTTCTCGTGCTTGGAGTGAGCAGGCATC
CTCCCGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGGACAACACC
CTAGCGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGGGTAAGACT
CATCCCAAGCAGGATTGGAAGCGGATGTTCCTGGTTCGCCGTGCTTTGGA
ACATCGGTGGAAGGAAGGAAAGGCCGCTGCTATCTACCTTCATGGCCATA
AGGACAGTGTCTACTGTGCGCAATTTGATGAGGATAAAATCATCACTGGC
TCTCGCGATCGAACCATTCGTGTATGGGACGCTCATTACCCTTGGCCATG
CCGGAAGATCATTGGCCCTCCCCCGGGCGATGTCTCCGGTATTGGTCCGG
TCAATAACCCGGCGCAGCAATCAGCCGGAAAGCCGCCCTTCTTGACCATC
TGCCCCCCGCCGACGCGTTCTGCGGGGATCATGGCTCCCATTGAGCACAG
CGCAGACTATCACAGTGCTTCCATTCTCTGCCTCCAGTTTGACGAAGAAA
TCATGGTCACCGGTTCGTCTGATTTTACCTGCATTGTGTGGGATATCAAG
AACGACTACAAGCCGATTCGTCGCCTTGTGGGCCATCAGGCAGGAGTGCT
GGATGTCTGCTTTGATGACCGGTACATTGTGTCCTGCTCCAAAGACACTA
CAATTTGTGTGTGGGATCGGCACACAGGGGCCTTGGTGAAGAAACTCCTT
GGCCACAGAGGTCCAGTGAACGCTGTTCAGCTGCGCGGAGATCTTGTCGT
TTCTGCAAGCGGGGACGGCGTCGCCAAGCTCTGGAACATCACTTCTGGCC
TTTGTGTCAAGGAGTTTCCCAGCAAGGACCGTGGACTGGCATGTGTTGAA
TTCAGCGATGATGCTCGAACCATTCTCACTGGCGGCAACGATCAAGTGAT
CTATCAGTTTGACGCCAATACCGGCGACATGGTCAATGAGCTCAAGGGCC
ACGCGGGCTTGGTTCGCTCCTTGCACCTCGACAGTATGAACCAAAGAATC
GTCAGTGGTAGCTATGACATGAGTGTTAAAGTATTCGATGCTCAAAGTGG
CGAGCTATCCATTGACCTTCCGGGCTGGACAACGAGCTGGATGCTCAGCG
TCAAGTCCGATTATCGGCGCATTGTGGCTACCAGCCAAGACTCTCGCGCT
GTCATAATGGATTTTGGATACGGACTAGATGGCATAGACTTGCTGAAAGA
GTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004910ATCC10864_004910Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004910-T1.exon1ATCC10864_004910-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004910-T1.exon2ATCC10864_004910-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004910-T1.cdsATCC10864_004910-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004910-T1ATCC10864_004910-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
PFAMPF12937
InterProIPR036047
InterProIPR017986
InterProIPR019775
InterProIPR001680
InterProIPR036322
InterProIPR020472
InterProIPR001810
PFAMPF00400
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000130supercontigMCQH01000130:154377..156408 +
Powered by Drupal