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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000130:182243..184474- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_004920-T1 ID=ATCC10864_004920-T1|Name=ATCC10864_004920-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2232bp|location=Sequence derived from alignment at MCQH01000130:182243..184474- (Aspergillus niger ATCC 10864)
ATGTATCGCCTAAGCCGAGCCTTCCATCAAAGAACCCCCCTACCAAATCC
CTTCCAAACGCGGCCTTTTCTCAAGCGACACCGCCCATTCTCCACTCTTC
CCCGGCACTCATCTCCGGGACCATCTGTATCTGAAGCCCCGCTATTCGAC
CACTACTACGAGTGAGTAACCAGCCCGCACACCTCACCCCAGAAGTACAT
TGACTGACAGATTAATTCCATAAAGTGCCATCGTAATAGGAGCCGGCGGC
GCCGGCCTCCGCGCCGCAGTCGGTCTGACCGAGTCAGGGTTCCGCACCGC
ATGCATCACGAAACTGGTAGCATACCCTATACCCATTCCCTTCACATATA
TAACCCCCGAACAATCTCACAAAAGAGAGAAGTGACAATGAAATTAAGTT
TGAACATGATAGTTCCCCACACGCTCCCACACCGTCGCAGCCCAAGGCGG
CATCAACGCCGCGCTAGGTAACATGACGAAAGACGATTACCGCTGGCACA
TGTACGACACAGTCAAGGGCTCAGACTGGCTAGGAGACCAAGATGCAATC
CACTATATGACAAGAGAAGCACCGAAGGCTATATACGAGCTGGAGAACTA
CGGCATGGCGTTTTCCAGAACAGAAGATGGTCGCATATACCAGCGGGCTC
TTGGGGGACAGAGTCTGGATTATGGGAAAGGAGGGCAGGCGTATCGGACT
GCTTGTGCGGCGGATCGGACGGGTCATGCCATGTTGCATGCTCTGTATGG
GGAGGCGTTGAAGGTATATCACGCCATCATAATATACTGTAGAAATGATG
AACCCTGGTTCAATATAGTACTCTGGCAGAGACTGACTGACTGACGGATG
TGTTTAAACTCCAGCACGATACCAAATTCTTCGTTGAATTCTTCGCCCTT
GATCTTCTCATGGTCGACGGTGCCTGCGTTGGGGTCATCTGCCTCTCTCT
TGAAGACGGCACGCTGCATCGCTTTTTTGCGCGAAACACTGTCCTCGCGA
CGGGCGGTTACGGCCGGGCTTACTTCTCCTGCACGTCTGCACATACTTCT
ACCGGAGATGGTAATGCCATGGTTGCCCGCGCGGGTCTTCCTAACCAGGA
TATGGAGTTCGTGCAGTTCCACCCTTCTGGGATCCATGGCGCCGGGGTGC
TCATCACGGAAGGTGCTCGCGGGGAGGGCGGATATCTCCTCAATGCGCAC
GGCGAACGCTTCATGGAGCGGTATGCCCCGACAGCTAAAGACCTGGCTAG
TCGGGATGTAGTAGCAAGAGCCATGAATCTTGAGATCCGCGAGGGCCGGG
GCTGTGGCCCGGATAAGGATCATATCCATCTCCAGCTGTCTCATTTACCT
GCCGAGCTCATTCGTTCACGACTCCCTGGGATTCTTGAGACGGCGTCAAT
TTTCGCGGGGATTGACATTACTCGGGATCCTATTCCTGTTGTTCCTACGG
TTCATTACTGCATGGGCGGGATACCGACGAACTATAAAGGCCAGGTGCTT
ACTAGTAGTAGCCACACTTCCTCGGGGACAAACATCCCAGATGCAGAGGT
AGAACCCGTCCCAGGCCTCTACGCAGCCGGCGAATGTGCCAGTGTCAGCG
TGCACGGCGCCAACCGACTCGGCGCAAACTCGCTCCTGGACATAGTTGTC
TTCGGCCGGGCGTGTGCACTCCACATCGCCGAGACCAACGAACCCAACAT
GCCGCTTCACAATATCCCACATGATGATACTCCTCCGGCAAGCCTAGGCC
AAGACTCTCTATCAAGCCTATCCACGACCCTCCACGCAACAGGCGACCTC
CCGTCTTCATCACTACGCCACAACCTCCAACGAGCCATGCAAACGGACCT
CGCTGTGTTCCGCACGCACGAATCCCTTACCAGAGGACTAAGTAAAGTGA
TCCAAGTGCAGAATGATTTCTCCACGCGACTCAGAACAAGCGATAGAAGT
CTAATCTGGAATTCAGACCTAGTAGAGACACTGGAGTTGAGGAATCTGCT
GACGTGCGCGGCGCAGACGGCTATGGCGGCGTTGTGTAGGACGGAGAGTC
GGGGGAGTCATGCGAGGGAGGATTTCCCGGAGAGGAACGATGAGGGGTGG
TTGAAGCATAGTTGGACGTGGCAGAAGGACGAAAAAGAGGAGGGGGTTCG
GGTGGGGTATCGGGGGGTGATTATGAAGACGTTGGATGAGGGGGATTGTA
AGAGTGTGCCGCCGGTGAAGAGGAGCTACTGA back to topCoding sequence (CDS) from alignment at MCQH01000130:182243..184474- >ATCC10864_004920-T1 ID=ATCC10864_004920-T1|Name=ATCC10864_004920-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7884bp|location=Sequence derived from alignment at MCQH01000130:182243..184474- (Aspergillus niger ATCC 10864)
CACGATACCAAATTCTTCGTTGAATTCTTCGCCCTTGATCTTCTCATGGT
CGACGGTGCCTGCGTTGGGGTCATCTGCCTCTCTCTTGAAGACGGCACGC
TGCATCGCTTTTTTGCGCGAAACACTGTCCTCGCGACGGGCGGTTACGGC
CGGGCTTACTTCTCCTGCACGTCTGCACATACTTCTACCGGAGATGGTAA
TGCCATGGTTGCCCGCGCGGGTCTTCCTAACCAGGATATGGAGTTCGTGC
AGTTCCACCCTTCTGGGATCCATGGCGCCGGGGTGCTCATCACGGAAGGT
GCTCGCGGGGAGGGCGGATATCTCCTCAATGCGCACGGCGAACGCTTCAT
GGAGCGGTATGCCCCGACAGCTAAAGACCTGGCTAGTCGGGATGTAGTAG
CAAGAGCCATGAATCTTGAGATCCGCGAGGGCCGGGGCTGTGGCCCGGAT
AAGGATCATATCCATCTCCAGCTGTCTCATTTACCTGCCGAGCTCATTCG
TTCACGACTCCCTGGGATTCTTGAGACGGCGTCAATTTTCGCGGGGATTG
ACATTACTCGGGATCCTATTCCTGTTGTTCCTACGGTTCATTACTGCATG
GGCGGGATACCGACGAACTATAAAGGCCAGGTGCTTACTAGTAGTAGCCA
CACTTCCTCGGGGACAAACATCCCAGATGCAGAGGTAGAACCCGTCCCAG
GCCTCTACGCAGCCGGCGAATGTGCCAGTGTCAGCGTGCACGGCGCCAAC
CGACTCGGCGCAAACTCGCTCCTGGACATAGTTGTCTTCGGCCGGGCGTG
TGCACTCCACATCGCCGAGACCAACGAACCCAACATGCCGCTTCACAATA
TCCCACATGATGATACTCCTCCGGCAAGCCTAGGCCAAGACTCTCTATCA
AGCCTATCCACGACCCTCCACGCAACAGGCGACCTCCCGTCTTCATCACT
ACGCCACAACCTCCAACGAGCCATGCAAACGGACCTCGCTGTGTTCCGCA
CGCACGAATCCCTTACCAGAGGACTAAGTAAAGTGATCCAAGTGCAGAAT
GATTTCTCCACGCGACTCAGAACAAGCGATAGAAGTCTAATCTGGAATTC
AGACCTAGTAGAGACACTGGAGTTGAGGAATCTGCTGACGTGCGCGGCGC
AGACGGCTATGGCGGCGTTGTGTAGGACGGAGAGTCGGGGGAGTCATGCG
AGGGAGGATTTCCCGGAGAGGAACGATGAGGGGTGGTTGAAGCATAGTTG
GACGTGGCAGAAGGACGAAAAAGAGGAGGGGGTTCGGGTGGGGTATCGGG
GGGTGATTATGAAGACGTTGGATGAGGGGGATTGTAAGAGTGTGCCGCCG
GTGAAGAGGAGCTACTGATTCCCCACACGCTCCCACACCGTCGCAGCCCA
AGGCGGCATCAACGCCGCGCTAGGTAACATGACGAAAGACGATTACCGCT
GGCACATGTACGACACAGTCAAGGGCTCAGACTGGCTAGGAGACCAAGAT
GCAATCCACTATATGACAAGAGAAGCACCGAAGGCTATATACGAGCTGGA
GAACTACGGCATGGCGTTTTCCAGAACAGAAGATGGTCGCATATACCAGC
GGGCTCTTGGGGGACAGAGTCTGGATTATGGGAAAGGAGGGCAGGCGTAT
CGGACTGCTTGTGCGGCGGATCGGACGGGTCATGCCATGTTGCATGCTCT
GTATGGGGAGGCGTTGAAGTGCCATCGTAATAGGAGCCGGCGGCGCCGGC
CTCCGCGCCGCAGTCGGTCTGACCGAGTCAGGGTTCCGCACCGCATGCAT
CACGAAACTGATGTATCGCCTAAGCCGAGCCTTCCATCAAAGAACCCCCC
TACCAAATCCCTTCCAAACGCGGCCTTTTCTCAAGCGACACCGCCCATTC
TCCACTCTTCCCCGGCACTCATCTCCGGGACCATCTGTATCTGAAGCCCC
GCTATTCGACCACTACTACGACACGATACCAAATTCTTCGTTGAATTCTT
CGCCCTTGATCTTCTCATGGTCGACGGTGCCTGCGTTGGGGTCATCTGCC
TCTCTCTTGAAGACGGCACGCTGCATCGCTTTTTTGCGCGAAACACTGTC
CTCGCGACGGGCGGTTACGGCCGGGCTTACTTCTCCTGCACGTCTGCACA
TACTTCTACCGGAGATGGTAATGCCATGGTTGCCCGCGCGGGTCTTCCTA
ACCAGGATATGGAGTTCGTGCAGTTCCACCCTTCTGGGATCCATGGCGCC
GGGGTGCTCATCACGGAAGGTGCTCGCGGGGAGGGCGGATATCTCCTCAA
TGCGCACGGCGAACGCTTCATGGAGCGGTATGCCCCGACAGCTAAAGACC
TGGCTAGTCGGGATGTAGTAGCAAGAGCCATGAATCTTGAGATCCGCGAG
GGCCGGGGCTGTGGCCCGGATAAGGATCATATCCATCTCCAGCTGTCTCA
TTTACCTGCCGAGCTCATTCGTTCACGACTCCCTGGGATTCTTGAGACGG
CGTCAATTTTCGCGGGGATTGACATTACTCGGGATCCTATTCCTGTTGTT
CCTACGGTTCATTACTGCATGGGCGGGATACCGACGAACTATAAAGGCCA
GGTGCTTACTAGTAGTAGCCACACTTCCTCGGGGACAAACATCCCAGATG
CAGAGGTAGAACCCGTCCCAGGCCTCTACGCAGCCGGCGAATGTGCCAGT
GTCAGCGTGCACGGCGCCAACCGACTCGGCGCAAACTCGCTCCTGGACAT
AGTTGTCTTCGGCCGGGCGTGTGCACTCCACATCGCCGAGACCAACGAAC
CCAACATGCCGCTTCACAATATCCCACATGATGATACTCCTCCGGCAAGC
CTAGGCCAAGACTCTCTATCAAGCCTATCCACGACCCTCCACGCAACAGG
CGACCTCCCGTCTTCATCACTACGCCACAACCTCCAACGAGCCATGCAAA
CGGACCTCGCTGTGTTCCGCACGCACGAATCCCTTACCAGAGGACTAAGT
AAAGTGATCCAAGTGCAGAATGATTTCTCCACGCGACTCAGAACAAGCGA
TAGAAGTCTAATCTGGAATTCAGACCTAGTAGAGACACTGGAGTTGAGGA
ATCTGCTGACGTGCGCGGCGCAGACGGCTATGGCGGCGTTGTGTAGGACG
GAGAGTCGGGGGAGTCATGCGAGGGAGGATTTCCCGGAGAGGAACGATGA
GGGGTGGTTGAAGCATAGTTGGACGTGGCAGAAGGACGAAAAAGAGGAGG
GGGTTCGGGTGGGGTATCGGGGGGTGATTATGAAGACGTTGGATGAGGGG
GATTGTAAGAGTGTGCCGCCGGTGAAGAGGAGCTACTGATTCCCCACACG
CTCCCACACCGTCGCAGCCCAAGGCGGCATCAACGCCGCGCTAGGTAACA
TGACGAAAGACGATTACCGCTGGCACATGTACGACACAGTCAAGGGCTCA
GACTGGCTAGGAGACCAAGATGCAATCCACTATATGACAAGAGAAGCACC
GAAGGCTATATACGAGCTGGAGAACTACGGCATGGCGTTTTCCAGAACAG
AAGATGGTCGCATATACCAGCGGGCTCTTGGGGGACAGAGTCTGGATTAT
GGGAAAGGAGGGCAGGCGTATCGGACTGCTTGTGCGGCGGATCGGACGGG
TCATGCCATGTTGCATGCTCTGTATGGGGAGGCGTTGAAGTGCCATCGTA
ATAGGAGCCGGCGGCGCCGGCCTCCGCGCCGCAGTCGGTCTGACCGAGTC
AGGGTTCCGCACCGCATGCATCACGAAACTGATGTATCGCCTAAGCCGAG
CCTTCCATCAAAGAACCCCCCTACCAAATCCCTTCCAAACGCGGCCTTTT
CTCAAGCGACACCGCCCATTCTCCACTCTTCCCCGGCACTCATCTCCGGG
ACCATCTGTATCTGAAGCCCCGCTATTCGACCACTACTACGACACGATAC
CAAATTCTTCGTTGAATTCTTCGCCCTTGATCTTCTCATGGTCGACGGTG
CCTGCGTTGGGGTCATCTGCCTCTCTCTTGAAGACGGCACGCTGCATCGC
TTTTTTGCGCGAAACACTGTCCTCGCGACGGGCGGTTACGGCCGGGCTTA
CTTCTCCTGCACGTCTGCACATACTTCTACCGGAGATGGTAATGCCATGG
TTGCCCGCGCGGGTCTTCCTAACCAGGATATGGAGTTCGTGCAGTTCCAC
CCTTCTGGGATCCATGGCGCCGGGGTGCTCATCACGGAAGGTGCTCGCGG
GGAGGGCGGATATCTCCTCAATGCGCACGGCGAACGCTTCATGGAGCGGT
ATGCCCCGACAGCTAAAGACCTGGCTAGTCGGGATGTAGTAGCAAGAGCC
ATGAATCTTGAGATCCGCGAGGGCCGGGGCTGTGGCCCGGATAAGGATCA
TATCCATCTCCAGCTGTCTCATTTACCTGCCGAGCTCATTCGTTCACGAC
TCCCTGGGATTCTTGAGACGGCGTCAATTTTCGCGGGGATTGACATTACT
CGGGATCCTATTCCTGTTGTTCCTACGGTTCATTACTGCATGGGCGGGAT
ACCGACGAACTATAAAGGCCAGGTGCTTACTAGTAGTAGCCACACTTCCT
CGGGGACAAACATCCCAGATGCAGAGGTAGAACCCGTCCCAGGCCTCTAC
GCAGCCGGCGAATGTGCCAGTGTCAGCGTGCACGGCGCCAACCGACTCGG
CGCAAACTCGCTCCTGGACATAGTTGTCTTCGGCCGGGCGTGTGCACTCC
ACATCGCCGAGACCAACGAACCCAACATGCCGCTTCACAATATCCCACAT
GATGATACTCCTCCGGCAAGCCTAGGCCAAGACTCTCTATCAAGCCTATC
CACGACCCTCCACGCAACAGGCGACCTCCCGTCTTCATCACTACGCCACA
ACCTCCAACGAGCCATGCAAACGGACCTCGCTGTGTTCCGCACGCACGAA
TCCCTTACCAGAGGACTAAGTAAAGTGATCCAAGTGCAGAATGATTTCTC
CACGCGACTCAGAACAAGCGATAGAAGTCTAATCTGGAATTCAGACCTAG
TAGAGACACTGGAGTTGAGGAATCTGCTGACGTGCGCGGCGCAGACGGCT
ATGGCGGCGTTGTGTAGGACGGAGAGTCGGGGGAGTCATGCGAGGGAGGA
TTTCCCGGAGAGGAACGATGAGGGGTGGTTGAAGCATAGTTGGACGTGGC
AGAAGGACGAAAAAGAGGAGGGGGTTCGGGTGGGGTATCGGGGGGTGATT
ATGAAGACGTTGGATGAGGGGGATTGTAAGAGTGTGCCGCCGGTGAAGAG
GAGCTACTGATTCCCCACACGCTCCCACACCGTCGCAGCCCAAGGCGGCA
TCAACGCCGCGCTAGGTAACATGACGAAAGACGATTACCGCTGGCACATG
TACGACACAGTCAAGGGCTCAGACTGGCTAGGAGACCAAGATGCAATCCA
CTATATGACAAGAGAAGCACCGAAGGCTATATACGAGCTGGAGAACTACG
GCATGGCGTTTTCCAGAACAGAAGATGGTCGCATATACCAGCGGGCTCTT
GGGGGACAGAGTCTGGATTATGGGAAAGGAGGGCAGGCGTATCGGACTGC
TTGTGCGGCGGATCGGACGGGTCATGCCATGTTGCATGCTCTGTATGGGG
AGGCGTTGAAGTGCCATCGTAATAGGAGCCGGCGGCGCCGGCCTCCGCGC
CGCAGTCGGTCTGACCGAGTCAGGGTTCCGCACCGCATGCATCACGAAAC
TGATGTATCGCCTAAGCCGAGCCTTCCATCAAAGAACCCCCCTACCAAAT
CCCTTCCAAACGCGGCCTTTTCTCAAGCGACACCGCCCATTCTCCACTCT
TCCCCGGCACTCATCTCCGGGACCATCTGTATCTGAAGCCCCGCTATTCG
ACCACTACTACGACACGATACCAAATTCTTCGTTGAATTCTTCGCCCTTG
ATCTTCTCATGGTCGACGGTGCCTGCGTTGGGGTCATCTGCCTCTCTCTT
GAAGACGGCACGCTGCATCGCTTTTTTGCGCGAAACACTGTCCTCGCGAC
GGGCGGTTACGGCCGGGCTTACTTCTCCTGCACGTCTGCACATACTTCTA
CCGGAGATGGTAATGCCATGGTTGCCCGCGCGGGTCTTCCTAACCAGGAT
ATGGAGTTCGTGCAGTTCCACCCTTCTGGGATCCATGGCGCCGGGGTGCT
CATCACGGAAGGTGCTCGCGGGGAGGGCGGATATCTCCTCAATGCGCACG
GCGAACGCTTCATGGAGCGGTATGCCCCGACAGCTAAAGACCTGGCTAGT
CGGGATGTAGTAGCAAGAGCCATGAATCTTGAGATCCGCGAGGGCCGGGG
CTGTGGCCCGGATAAGGATCATATCCATCTCCAGCTGTCTCATTTACCTG
CCGAGCTCATTCGTTCACGACTCCCTGGGATTCTTGAGACGGCGTCAATT
TTCGCGGGGATTGACATTACTCGGGATCCTATTCCTGTTGTTCCTACGGT
TCATTACTGCATGGGCGGGATACCGACGAACTATAAAGGCCAGGTGCTTA
CTAGTAGTAGCCACACTTCCTCGGGGACAAACATCCCAGATGCAGAGGTA
GAACCCGTCCCAGGCCTCTACGCAGCCGGCGAATGTGCCAGTGTCAGCGT
GCACGGCGCCAACCGACTCGGCGCAAACTCGCTCCTGGACATAGTTGTCT
TCGGCCGGGCGTGTGCACTCCACATCGCCGAGACCAACGAACCCAACATG
CCGCTTCACAATATCCCACATGATGATACTCCTCCGGCAAGCCTAGGCCA
AGACTCTCTATCAAGCCTATCCACGACCCTCCACGCAACAGGCGACCTCC
CGTCTTCATCACTACGCCACAACCTCCAACGAGCCATGCAAACGGACCTC
GCTGTGTTCCGCACGCACGAATCCCTTACCAGAGGACTAAGTAAAGTGAT
CCAAGTGCAGAATGATTTCTCCACGCGACTCAGAACAAGCGATAGAAGTC
TAATCTGGAATTCAGACCTAGTAGAGACACTGGAGTTGAGGAATCTGCTG
ACGTGCGCGGCGCAGACGGCTATGGCGGCGTTGTGTAGGACGGAGAGTCG
GGGGAGTCATGCGAGGGAGGATTTCCCGGAGAGGAACGATGAGGGGTGGT
TGAAGCATAGTTGGACGTGGCAGAAGGACGAAAAAGAGGAGGGGGTTCGG
GTGGGGTATCGGGGGGTGATTATGAAGACGTTGGATGAGGGGGATTGTAA
GAGTGTGCCGCCGGTGAAGAGGAGCTACTGATTCCCCACACGCTCCCACA
CCGTCGCAGCCCAAGGCGGCATCAACGCCGCGCTAGGTAACATGACGAAA
GACGATTACCGCTGGCACATGTACGACACAGTCAAGGGCTCAGACTGGCT
AGGAGACCAAGATGCAATCCACTATATGACAAGAGAAGCACCGAAGGCTA
TATACGAGCTGGAGAACTACGGCATGGCGTTTTCCAGAACAGAAGATGGT
CGCATATACCAGCGGGCTCTTGGGGGACAGAGTCTGGATTATGGGAAAGG
AGGGCAGGCGTATCGGACTGCTTGTGCGGCGGATCGGACGGGTCATGCCA
TGTTGCATGCTCTGTATGGGGAGGCGTTGAAGTGCCATCGTAATAGGAGC
CGGCGGCGCCGGCCTCCGCGCCGCAGTCGGTCTGACCGAGTCAGGGTTCC
GCACCGCATGCATCACGAAACTGATGTATCGCCTAAGCCGAGCCTTCCAT
CAAAGAACCCCCCTACCAAATCCCTTCCAAACGCGGCCTTTTCTCAAGCG
ACACCGCCCATTCTCCACTCTTCCCCGGCACTCATCTCCGGGACCATCTG
TATCTGAAGCCCCGCTATTCGACCACTACTACGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0022900 | electron transport chain |
| GO:0006099 | tricarboxylic acid cycle |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR027477 |
| InterPro | IPR014006 |
| InterPro | IPR003952 |
| PFAM | PF02910 |
| InterPro | IPR003953 |
| InterPro | IPR037099 |
| PFAM | PF00890 |
| InterPro | IPR015939 |
| InterPro | IPR036188 |
| InterPro | IPR011281 |
Properties
| Property Name | Value |
|---|
| Product | succinate dehydrogenase flavoprotein subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000130 | supercontig | MCQH01000130:182243..184474 - |
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