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ATCC10864_004962-T1, ATCC10864_004962-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004962-T1
Unique NameATCC10864_004962-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000130:300117..301602+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004962-T1 ID=ATCC10864_004962-T1|Name=ATCC10864_004962-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1486bp|location=Sequence derived from alignment at MCQH01000130:300117..301602+ (Aspergillus niger ATCC 10864)
ATGGCAGCCAACGTTCCTCCTTCCGCTGAGACCCTTCTCAGCGGTGCTGC
CGCCCACCCGCCCAAGACCGCTGAAGAGATCGCCAACCAGTATGACCTGC
TGCCCAAGCTGATCCCCTACCTCGACCGCCATCTGGTCTTCCCTCTTCTC
GAGTTCAGCTCCGGCTCCCAGGAAGATGACAAGGAGATGATCCGCGCCAA
GTACGAGCTGTTGAAGCACACCAACATGACCGACTATGTGGCCAACCTGT
GGAAGGAAATTAACGACTCCGACACCATCCCCGACGAGTTCGTCAAGAAG
AGAGAGGAGGTCCTCGCCAAGTTGCAACACTACCAGGAGCAGAGCGCCAA
GATCACCGAGCTGCTGCAGGATGAGGATGTCGTCGGCAACCTGCGCAGCG
ACAAGGTCGCCAACTTGAAGTTCCTCGAGGAGGAGCACGGTGTCACCGCC
GATATGGTCAACAGCCTTTTCGACTATGGTCGCTTCCAGTACAGCTGCGG
TAGTTACGGCAATGCCGCTGAGCTGCTGTACCAGTTCCGTGTCCTCTCCA
CCGACAACGACAAGGTTGCTTCCGCCACATGGGGTAAGCTCGCCTCGGAG
ATTCTGACCACCAGCTGGGATGGTGCTATGGAGGAAGTCCAGAAGGTCAA
GGACTCGATCGAGACCCGTCTCTTCAACAACCCTCTGGGTCAGCTCCAGA
ACCGCTCCTGGTTGATCCACTGGTCTCTCTTCCCCTTCTTCAACTACGAC
CCTGCTCGCGATGTCCTGACCGACCTTTTCTTCTCCCCCGCCTACATCAA
CACCATCCAGACTAGCTGCCCCTGGATCCTGCGCTACCTCGCCGCCGCCG
TCATCACCAACCGCAACCGTGCCCACAAGAACAGCAACGTCTACCAGAAG
CAGTTGAAGGACCTGATCCGCGTCGTTCGCCAGGAGGGCTACGAATACTC
CGACCCCATCACCGACTTCGTTAAGGCGCTGTACGTTGACTTCGACTTTG
AGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAGGATGTGTTGCGGAGCGAC
TTCTTCCTCGTTTCGGCTGCCGATGCCTTCGTTGAGGCTGCCCGTCACCT
GATCTCCGAGAGCTACTGCAAGATCCACCAGCGGATCGACATCAAGTATG
TCAATCAACACGAAGAACATTCATTCACGCATTATCTTGCTAACCGATCA
CACCAGGGACCTGTCTACCCGTCTGGGTCTGAACCAGGATGAGGGTGAGA
AGTGGATCGTCAACCTGATCCGTGACACTCGTGTCGACGCCAAGATTGAC
TACAAGGAGGGCACTGTGATCATGAACCACCCCCCGCAGTCGGTGTACCA
GCAGGTCATTGAGAAGACCAAGGGTGCTTTCTTCCGCACGCAAGTTCTGA
GGTTCGTCCAATACCCTATCCTATCAATCCATCTCCATCCTTTGTTACTA
ACGCCAAAATGATCCAGTGCTGCCGTTGCGAAATAA
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Coding sequence (CDS) from alignment at MCQH01000130:300117..301602+

>ATCC10864_004962-T1 ID=ATCC10864_004962-T1|Name=ATCC10864_004962-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4077bp|location=Sequence derived from alignment at MCQH01000130:300117..301602+ (Aspergillus niger ATCC 10864)
ATGGCAGCCAACGTTCCTCCTTCCGCTGAGACCCTTCTCAGCGGTGCTGC
CGCCCACCCGCCCAAGACCGCTGAAGAGATCGCCAACCAGTATGACCTGC
TGCCCAAGCTGATCCCCTACCTCGACCGCCATCTGGTCTTCCCTCTTCTC
GAGTTCAGCTCCGGCTCCCAGGAAGATGACAAGGAGATGATCCGCGCCAA
GTACGAGCTGTTGAAGCACACCAACATGACCGACTATGTGGCCAACCTGT
GGAAGGAAATTAACGACTCCGACACCATCCCCGACGAGTTCGTCAAGAAG
AGAGAGGAGGTCCTCGCCAAGTTGCAACACTACCAGGAGCAGAGCGCCAA
GATCACCGAGCTGCTGCAGGATGAGGATGTCGTCGGCAACCTGCGCAGCG
ACAAGGTCGCCAACTTGAAGTTCCTCGAGGAGGAGCACGGTGTCACCGCC
GATATGGTCAACAGCCTTTTCGACTATGGTCGCTTCCAGTACAGCTGCGG
TAGTTACGGCAATGCCGCTGAGCTGCTGTACCAGTTCCGTGTCCTCTCCA
CCGACAACGACAAGGTTGCTTCCGCCACATGGGGTAAGCTCGCCTCGGAG
ATTCTGACCACCAGCTGGGATGGTGCTATGGAGGAAGTCCAGAAGGTCAA
GGACTCGATCGAGACCCGTCTCTTCAACAACCCTCTGGGTCAGCTCCAGA
ACCGCTCCTGGTTGATCCACTGGTCTCTCTTCCCCTTCTTCAACTACGAC
CCTGCTCGCGATGTCCTGACCGACCTTTTCTTCTCCCCCGCCTACATCAA
CACCATCCAGACTAGCTGCCCCTGGATCCTGCGCTACCTCGCCGCCGCCG
TCATCACCAACCGCAACCGTGCCCACAAGAACAGCAACGTCTACCAGAAG
CAGTTGAAGGACCTGATCCGCGTCGTTCGCCAGGAGGGCTACGAATACTC
CGACCCCATCACCGACTTCGTTAAGGCGCTGTACGTTGACTTCGACTTTG
AGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAGGATGTGTTGCGGAGCGAC
TTCTTCCTCGTTTCGGCTGCCGATGCCTTCGTTGAGGCTGCCCGTCACCT
GATCTCCGAGAGCTACTGCAAGATCCACCAGCGGATCGACATCAAGGACC
TGTCTACCCGTCTGGGTCTGAACCAGGATGAGGGTGAGAAGTGGATCGTC
AACCTGATCCGTGACACTCGTGTCGACGCCAAGATTGACTACAAGGAGGG
CACTGTGATCATGAACCACCCCCCGCAGTCGGTGTACCAGCAGGTCATTG
AGAAGACCAAGGGTGCTTTCTTCCGCACGCAAGTTCTGAGTGCTGCCGTT
GCGAAATAAATGGCAGCCAACGTTCCTCCTTCCGCTGAGACCCTTCTCAG
CGGTGCTGCCGCCCACCCGCCCAAGACCGCTGAAGAGATCGCCAACCAGT
ATGACCTGCTGCCCAAGCTGATCCCCTACCTCGACCGCCATCTGGTCTTC
CCTCTTCTCGAGTTCAGCTCCGGCTCCCAGGAAGATGACAAGGAGATGAT
CCGCGCCAAGTACGAGCTGTTGAAGCACACCAACATGACCGACTATGTGG
CCAACCTGTGGAAGGAAATTAACGACTCCGACACCATCCCCGACGAGTTC
GTCAAGAAGAGAGAGGAGGTCCTCGCCAAGTTGCAACACTACCAGGAGCA
GAGCGCCAAGATCACCGAGCTGCTGCAGGATGAGGATGTCGTCGGCAACC
TGCGCAGCGACAAGGTCGCCAACTTGAAGTTCCTCGAGGAGGAGCACGGT
GTCACCGCCGATATGGTCAACAGCCTTTTCGACTATGGTCGCTTCCAGTA
CAGCTGCGGTAGTTACGGCAATGCCGCTGAGCTGCTGTACCAGTTCCGTG
TCCTCTCCACCGACAACGACAAGGTTGCTTCCGCCACATGGGGTAAGCTC
GCCTCGGAGATTCTGACCACCAGCTGGGATGGTGCTATGGAGGAAGTCCA
GAAGGTCAAGGACTCGATCGAGACCCGTCTCTTCAACAACCCTCTGGGTC
AGCTCCAGAACCGCTCCTGGTTGATCCACTGGTCTCTCTTCCCCTTCTTC
AACTACGACCCTGCTCGCGATGTCCTGACCGACCTTTTCTTCTCCCCCGC
CTACATCAACACCATCCAGACTAGCTGCCCCTGGATCCTGCGCTACCTCG
CCGCCGCCGTCATCACCAACCGCAACCGTGCCCACAAGAACAGCAACGTC
TACCAGAAGCAGTTGAAGGACCTGATCCGCGTCGTTCGCCAGGAGGGCTA
CGAATACTCCGACCCCATCACCGACTTCGTTAAGGCGCTGTACGTTGACT
TCGACTTTGAGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAGGATGTGTTG
CGGAGCGACTTCTTCCTCGTTTCGGCTGCCGATGCCTTCGTTGAGGCTGC
CCGTCACCTGATCTCCGAGAGCTACTGCAAGATCCACCAGCGGATCGACA
TCAAGGACCTGTCTACCCGTCTGGGTCTGAACCAGGATGAGGGTGAGAAG
TGGATCGTCAACCTGATCCGTGACACTCGTGTCGACGCCAAGATTGACTA
CAAGGAGGGCACTGTGATCATGAACCACCCCCCGCAGTCGGTGTACCAGC
AGGTCATTGAGAAGACCAAGGGTGCTTTCTTCCGCACGCAAGTTCTGAGT
GCTGCCGTTGCGAAATAAATGGCAGCCAACGTTCCTCCTTCCGCTGAGAC
CCTTCTCAGCGGTGCTGCCGCCCACCCGCCCAAGACCGCTGAAGAGATCG
CCAACCAGTATGACCTGCTGCCCAAGCTGATCCCCTACCTCGACCGCCAT
CTGGTCTTCCCTCTTCTCGAGTTCAGCTCCGGCTCCCAGGAAGATGACAA
GGAGATGATCCGCGCCAAGTACGAGCTGTTGAAGCACACCAACATGACCG
ACTATGTGGCCAACCTGTGGAAGGAAATTAACGACTCCGACACCATCCCC
GACGAGTTCGTCAAGAAGAGAGAGGAGGTCCTCGCCAAGTTGCAACACTA
CCAGGAGCAGAGCGCCAAGATCACCGAGCTGCTGCAGGATGAGGATGTCG
TCGGCAACCTGCGCAGCGACAAGGTCGCCAACTTGAAGTTCCTCGAGGAG
GAGCACGGTGTCACCGCCGATATGGTCAACAGCCTTTTCGACTATGGTCG
CTTCCAGTACAGCTGCGGTAGTTACGGCAATGCCGCTGAGCTGCTGTACC
AGTTCCGTGTCCTCTCCACCGACAACGACAAGGTTGCTTCCGCCACATGG
GGTAAGCTCGCCTCGGAGATTCTGACCACCAGCTGGGATGGTGCTATGGA
GGAAGTCCAGAAGGTCAAGGACTCGATCGAGACCCGTCTCTTCAACAACC
CTCTGGGTCAGCTCCAGAACCGCTCCTGGTTGATCCACTGGTCTCTCTTC
CCCTTCTTCAACTACGACCCTGCTCGCGATGTCCTGACCGACCTTTTCTT
CTCCCCCGCCTACATCAACACCATCCAGACTAGCTGCCCCTGGATCCTGC
GCTACCTCGCCGCCGCCGTCATCACCAACCGCAACCGTGCCCACAAGAAC
AGCAACGTCTACCAGAAGCAGTTGAAGGACCTGATCCGCGTCGTTCGCCA
GGAGGGCTACGAATACTCCGACCCCATCACCGACTTCGTTAAGGCGCTGT
ACGTTGACTTCGACTTTGAGGAGGCCCAGAAGAAGTTGGGTGAGGCCGAG
GATGTGTTGCGGAGCGACTTCTTCCTCGTTTCGGCTGCCGATGCCTTCGT
TGAGGCTGCCCGTCACCTGATCTCCGAGAGCTACTGCAAGATCCACCAGC
GGATCGACATCAAGGACCTGTCTACCCGTCTGGGTCTGAACCAGGATGAG
GGTGAGAAGTGGATCGTCAACCTGATCCGTGACACTCGTGTCGACGCCAA
GATTGACTACAAGGAGGGCACTGTGATCATGAACCACCCCCCGCAGTCGG
TGTACCAGCAGGTCATTGAGAAGACCAAGGGTGCTTTCTTCCGCACGCAA
GTTCTGAGTGCTGCCGTTGCGAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
INT6ATCC10864_004962Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004962-T1.exon1ATCC10864_004962-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004962-T1.exon2ATCC10864_004962-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004962-T1.exon3ATCC10864_004962-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004962-T1.cdsATCC10864_004962-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004962-T1ATCC10864_004962-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01399
PFAMPF09440
InterProIPR019010
InterProIPR000717
InterProIPR016650
InterProIPR036390
Properties
Property NameValue
Producteukaryotic translation initiation factor 3 subunit E
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000130supercontigMCQH01000130:300117..301602 +
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