You are here

Home

ATCC10864_004995-T1, ATCC10864_004995-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_004995-T1
Unique NameATCC10864_004995-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000138:34636..35651+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_004995-T1 ID=ATCC10864_004995-T1|Name=ATCC10864_004995-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1016bp|location=Sequence derived from alignment at MCQH01000138:34636..35651+ (Aspergillus niger ATCC 10864)
ATGACTTTGACCATGTCGGACGTTTACGCTGAAAACCTGCAGCGCGATGC
TGAGGAGTCTCGGAGGTATACCCCCCATGTCGGCACATATGTGTAAGAAT
TCTTAACACTGACCACCGTAAAGGCTAGATGAGCAATTTGATCTCCTGAG
CGAGTATGCCTTCCCCAAGCCCAAGATGGTTCGTTGATCGGAGCTGACAT
ACACCTAGGAATCTTGGTTACCTCATCCACCCGGGGATCCTGCGTTCGCT
CAGGCAGAGCAACAGTTCTCCCATCAAGATCGCTGATCTGGCCACCGGGA
CGGCACGCTTCCTACGGCAGGTGGCTGAAAGTACCGACCCCATTCTGGCA
AATGCCGTGCTTGATGGGAGCGATCTTTCCGCTTCACAGTTTCCTGCCCC
AAGCAGTCTCCCGTCTAACATCCATCTACGGGTGCAGGACGTCCGAGCCC
CCGTGCCGCGTGAGTGGGAAGGATGCTACGACCTGGTGCATGTCCGCCAA
ATTGCTGCGGGGCTGGCGCCAGATGAATGGCTGCCCGTCGTGGCCAACCT
CGCGCGGCTGCTGAAGCCAGGCGGGGCGATACAGTGGGAGGAATGCAACT
TCTCTAATGTGGTGCACTTGCGGGGTGGAGAAGGGGACGGTATGTCCTGT
ACGGTGGGGGCGGCCCGGAGCCTAGGCCAGATGTTCCGGACAGGGCTGAT
GACCCATTTCTGTCATGGTTGGGATCGTCTCGACACTGCCATGGCGGCTG
CTGGGCTGGAACGCATTGTTGCTGACATGGTGGGTTCTGATCGTGTTCCG
CATACGAGACGCGCTCTGACCCTCAATGGCATGCACGTCATTTCTCGCTG
GGCGATTGCCAAGGCTCAAGCCGGGAACCTGCGTGATCCTGCCGGTCGCC
TGGTGTCCTTGGATGAGGTGCAGGCCTTGGCTGACCAAGCCATGCGCGAC
ATTGAGTCTGGCTGTTACGTGCGCTTTGACATTCATGCGGCTTGGGGGTT
TAAACCTATGGCTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000138:34636..35651+

>ATCC10864_004995-T1 ID=ATCC10864_004995-T1|Name=ATCC10864_004995-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2709bp|location=Sequence derived from alignment at MCQH01000138:34636..35651+ (Aspergillus niger ATCC 10864)
ATGACTTTGACCATGTCGGACGTTTACGCTGAAAACCTGCAGCGCGATGC
TGAGGAGTCTCGGAGGCTAGATGAGCAATTTGATCTCCTGAGCGAGAATC
TTGGTTACCTCATCCACCCGGGGATCCTGCGTTCGCTCAGGCAGAGCAAC
AGTTCTCCCATCAAGATCGCTGATCTGGCCACCGGGACGGCACGCTTCCT
ACGGCAGGTGGCTGAAAGTACCGACCCCATTCTGGCAAATGCCGTGCTTG
ATGGGAGCGATCTTTCCGCTTCACAGTTTCCTGCCCCAAGCAGTCTCCCG
TCTAACATCCATCTACGGGTGCAGGACGTCCGAGCCCCCGTGCCGCGTGA
GTGGGAAGGATGCTACGACCTGGTGCATGTCCGCCAAATTGCTGCGGGGC
TGGCGCCAGATGAATGGCTGCCCGTCGTGGCCAACCTCGCGCGGCTGCTG
AAGCCAGGCGGGGCGATACAGTGGGAGGAATGCAACTTCTCTAATGTGGT
GCACTTGCGGGGTGGAGAAGGGGACGGTATGTCCTGTACGGTGGGGGCGG
CCCGGAGCCTAGGCCAGATGTTCCGGACAGGGCTGATGACCCATTTCTGT
CATGGTTGGGATCGTCTCGACACTGCCATGGCGGCTGCTGGGCTGGAACG
CATTGTTGCTGACATGGTGGGTTCTGATCGTGTTCCGCATACGAGACGCG
CTCTGACCCTCAATGGCATGCACGTCATTTCTCGCTGGGCGATTGCCAAG
GCTCAAGCCGGGAACCTGCGTGATCCTGCCGGTCGCCTGGTGTCCTTGGA
TGAGGTGCAGGCCTTGGCTGACCAAGCCATGCGCGACATTGAGTCTGGCT
GTTACGTGCGCTTTGACATTCATGCGGCTTGGGGGTTTAAACCTATGGCT
TGAATGACTTTGACCATGTCGGACGTTTACGCTGAAAACCTGCAGCGCGA
TGCTGAGGAGTCTCGGAGGCTAGATGAGCAATTTGATCTCCTGAGCGAGA
ATCTTGGTTACCTCATCCACCCGGGGATCCTGCGTTCGCTCAGGCAGAGC
AACAGTTCTCCCATCAAGATCGCTGATCTGGCCACCGGGACGGCACGCTT
CCTACGGCAGGTGGCTGAAAGTACCGACCCCATTCTGGCAAATGCCGTGC
TTGATGGGAGCGATCTTTCCGCTTCACAGTTTCCTGCCCCAAGCAGTCTC
CCGTCTAACATCCATCTACGGGTGCAGGACGTCCGAGCCCCCGTGCCGCG
TGAGTGGGAAGGATGCTACGACCTGGTGCATGTCCGCCAAATTGCTGCGG
GGCTGGCGCCAGATGAATGGCTGCCCGTCGTGGCCAACCTCGCGCGGCTG
CTGAAGCCAGGCGGGGCGATACAGTGGGAGGAATGCAACTTCTCTAATGT
GGTGCACTTGCGGGGTGGAGAAGGGGACGGTATGTCCTGTACGGTGGGGG
CGGCCCGGAGCCTAGGCCAGATGTTCCGGACAGGGCTGATGACCCATTTC
TGTCATGGTTGGGATCGTCTCGACACTGCCATGGCGGCTGCTGGGCTGGA
ACGCATTGTTGCTGACATGGTGGGTTCTGATCGTGTTCCGCATACGAGAC
GCGCTCTGACCCTCAATGGCATGCACGTCATTTCTCGCTGGGCGATTGCC
AAGGCTCAAGCCGGGAACCTGCGTGATCCTGCCGGTCGCCTGGTGTCCTT
GGATGAGGTGCAGGCCTTGGCTGACCAAGCCATGCGCGACATTGAGTCTG
GCTGTTACGTGCGCTTTGACATTCATGCGGCTTGGGGGTTTAAACCTATG
GCTTGAATGACTTTGACCATGTCGGACGTTTACGCTGAAAACCTGCAGCG
CGATGCTGAGGAGTCTCGGAGGCTAGATGAGCAATTTGATCTCCTGAGCG
AGAATCTTGGTTACCTCATCCACCCGGGGATCCTGCGTTCGCTCAGGCAG
AGCAACAGTTCTCCCATCAAGATCGCTGATCTGGCCACCGGGACGGCACG
CTTCCTACGGCAGGTGGCTGAAAGTACCGACCCCATTCTGGCAAATGCCG
TGCTTGATGGGAGCGATCTTTCCGCTTCACAGTTTCCTGCCCCAAGCAGT
CTCCCGTCTAACATCCATCTACGGGTGCAGGACGTCCGAGCCCCCGTGCC
GCGTGAGTGGGAAGGATGCTACGACCTGGTGCATGTCCGCCAAATTGCTG
CGGGGCTGGCGCCAGATGAATGGCTGCCCGTCGTGGCCAACCTCGCGCGG
CTGCTGAAGCCAGGCGGGGCGATACAGTGGGAGGAATGCAACTTCTCTAA
TGTGGTGCACTTGCGGGGTGGAGAAGGGGACGGTATGTCCTGTACGGTGG
GGGCGGCCCGGAGCCTAGGCCAGATGTTCCGGACAGGGCTGATGACCCAT
TTCTGTCATGGTTGGGATCGTCTCGACACTGCCATGGCGGCTGCTGGGCT
GGAACGCATTGTTGCTGACATGGTGGGTTCTGATCGTGTTCCGCATACGA
GACGCGCTCTGACCCTCAATGGCATGCACGTCATTTCTCGCTGGGCGATT
GCCAAGGCTCAAGCCGGGAACCTGCGTGATCCTGCCGGTCGCCTGGTGTC
CTTGGATGAGGTGCAGGCCTTGGCTGACCAAGCCATGCGCGACATTGAGT
CTGGCTGTTACGTGCGCTTTGACATTCATGCGGCTTGGGGGTTTAAACCT
ATGGCTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_004995ATCC10864_004995Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004995-T1.exon1ATCC10864_004995-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_004995-T1.exon2ATCC10864_004995-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_004995-T1.exon3ATCC10864_004995-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004995-T1.cdsATCC10864_004995-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_004995-T1ATCC10864_004995-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR029063
Properties
Property NameValue
NoteantiSMASH:Cluster_1000138.1
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000138supercontigMCQH01000138:34636..35651 +
Powered by Drupal