You are here

Home

ATCC10864_005038-T1, ATCC10864_005038-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005038-T1
Unique NameATCC10864_005038-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000138:167846..168999+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005038-T1 ID=ATCC10864_005038-T1|Name=ATCC10864_005038-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1154bp|location=Sequence derived from alignment at MCQH01000138:167846..168999+ (Aspergillus niger ATCC 10864)
ATGGCTGAAAGCACTGGCTCCTTGAGCTCGGACAGTGTGTTGGCGATCGC
CGCAACAGCTCTTCGCGGAGATGGGGCCGCGCCGCCTAGTCTCAAGACGC
CATACGAGGCGATCGCTCTAGTTGGCCATGCGTCTATGACAGCAGTCGGC
TTTCGCTTAGTCGGGCTTGGGGAAGATCATACGCTAGGTATGTGCGATGC
GACCATTGCAAGGTAATCAAGTACGCCTTACTGATGATTCTCAACCTTGC
AGAGAACCAATCCGAGAGCCCCTCACTCCCCGCAGAATGGAACGCCAACA
CGGCCTTTGCCTTCCGTTACGCCCACTCACAGTCGTCGATGCAGTATCTG
CTCAAGATTAGCCGACTTGGAAATAACGCTGTCATTTTCGCCTTGGCTCT
GGGCGATGACAGAACTACATCCTTCGATCTCCCCGTGAAAGACTACGTCT
CCGAATCAGCCCTTCCCTTGACCACTACCGGCGATGATCTCCCAGCAGCA
CTGCGCGAAGCATTTATATCTCCCTCTCGTGTCCAGGACCTGATCGGATT
ATTCAAGATCAACGTCATGCAGAAGCTGGCGCCTGGATTGTACAAAGAAG
GCTACGAAGATTCGTCCGATCAGCCACAGGAGACGTTGCGCGAGAGAACT
CTGGAAAGACCTCCACGCCATGATCCCTTACGAGACGATCCGATGCCCCA
ACCCGCTCGCCCGTATCCATTTGACGACCCCCTAGCGGTGCCTCCCCGAC
GACCCATTCCCGCGGGGGACTTTCCTCCACCAGGATTCGAGGATGAGTTC
GAGATCCAGAGACCACCCCGAGGATACCCGGGAGGTATGGGGGGAAGAAA
TCCGTTGAGTATTGGAGACCGCGATTTGTACCCTGCCGGATTAGGCCCAA
ATGATCCTTTGCGAGGAGGCGTAGGCCCTGGGCTGGGAGGTGGCGGCGGC
GGTGGTGGTGGTATGCACCCCACGTTCGATGATCCTCTGTTTGGTGGACC
TCGTGGACAAGGTTACGATCCCCAAGCACCACCAGGATCGCGGTATGATC
CGGTAGGACCCGGACAAGGGGCACCGTTTGGACGAGGACAGGGGCCGTAT
GGGGGACGCGGGTTTGGCGGAGGGTTCGGGGGATTTGGTGGTGACATCAT
TTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000138:167846..168999+

>ATCC10864_005038-T1 ID=ATCC10864_005038-T1|Name=ATCC10864_005038-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2178bp|location=Sequence derived from alignment at MCQH01000138:167846..168999+ (Aspergillus niger ATCC 10864)
ATGGCTGAAAGCACTGGCTCCTTGAGCTCGGACAGTGTGTTGGCGATCGC
CGCAACAGCTCTTCGCGGAGATGGGGCCGCGCCGCCTAGTCTCAAGACGC
CATACGAGGCGATCGCTCTAGTTGGCCATGCGTCTATGACAGCAGTCGGC
TTTCGCTTAGTCGGGCTTGGGGAAGATCATACGCTAGAGAACCAATCCGA
GAGCCCCTCACTCCCCGCAGAATGGAACGCCAACACGGCCTTTGCCTTCC
GTTACGCCCACTCACAGTCGTCGATGCAGTATCTGCTCAAGATTAGCCGA
CTTGGAAATAACGCTGTCATTTTCGCCTTGGCTCTGGGCGATGACAGAAC
TACATCCTTCGATCTCCCCGTGAAAGACTACGTCTCCGAATCAGCCCTTC
CCTTGACCACTACCGGCGATGATCTCCCAGCAGCACTGCGCGAAGCATTT
ATATCTCCCTCTCGTGTCCAGGACCTGATCGGATTATTCAAGATCAACGT
CATGCAGAAGCTGGCGCCTGGATTGTACAAAGAAGGCTACGAAGATTCGT
CCGATCAGCCACAGGAGACGTTGCGCGAGAGAACTCTGGAAAGACCTCCA
CGCCATGATCCCTTACGAGACGATCCGATGCCCCAACCCGCTCGCCCGTA
TCCATTTGACGACCCCCTAGCGGTGCCTCCCCGACGACCCATTCCCGCGG
GGGACTTTCCTCCACCAGGATTCGAGGATGAGTTCGAGATCCAGAGACCA
CCCCGAGGATACCCGGGAGGTATGGGGGGAAGAAATCCGTTGAGTATTGG
AGACCGCGATTTGTACCCTGCCGGATTAGGCCCAAATGATCCTTTGCGAG
GAGGCGTAGGCCCTGGGCTGGGAGGTGGCGGCGGCGGTGGTGGTGGTATG
CACCCCACGTTCGATGATCCTCTGTTTGGTGGACCTCGTGGACAAGGTTA
CGATCCCCAAGCACCACCAGGATCGCGGTATGATCCGGTAGGACCCGGAC
AAGGGGCACCGTTTGGACGAGGACAGGGGCCGTATGGGGGACGCGGGTTT
GGCGGAGGGTTCGGGGGATTTGGTGGTGACATCATTTAAATGGCTGAAAG
CACTGGCTCCTTGAGCTCGGACAGTGTGTTGGCGATCGCCGCAACAGCTC
TTCGCGGAGATGGGGCCGCGCCGCCTAGTCTCAAGACGCCATACGAGGCG
ATCGCTCTAGTTGGCCATGCGTCTATGACAGCAGTCGGCTTTCGCTTAGT
CGGGCTTGGGGAAGATCATACGCTAGAGAACCAATCCGAGAGCCCCTCAC
TCCCCGCAGAATGGAACGCCAACACGGCCTTTGCCTTCCGTTACGCCCAC
TCACAGTCGTCGATGCAGTATCTGCTCAAGATTAGCCGACTTGGAAATAA
CGCTGTCATTTTCGCCTTGGCTCTGGGCGATGACAGAACTACATCCTTCG
ATCTCCCCGTGAAAGACTACGTCTCCGAATCAGCCCTTCCCTTGACCACT
ACCGGCGATGATCTCCCAGCAGCACTGCGCGAAGCATTTATATCTCCCTC
TCGTGTCCAGGACCTGATCGGATTATTCAAGATCAACGTCATGCAGAAGC
TGGCGCCTGGATTGTACAAAGAAGGCTACGAAGATTCGTCCGATCAGCCA
CAGGAGACGTTGCGCGAGAGAACTCTGGAAAGACCTCCACGCCATGATCC
CTTACGAGACGATCCGATGCCCCAACCCGCTCGCCCGTATCCATTTGACG
ACCCCCTAGCGGTGCCTCCCCGACGACCCATTCCCGCGGGGGACTTTCCT
CCACCAGGATTCGAGGATGAGTTCGAGATCCAGAGACCACCCCGAGGATA
CCCGGGAGGTATGGGGGGAAGAAATCCGTTGAGTATTGGAGACCGCGATT
TGTACCCTGCCGGATTAGGCCCAAATGATCCTTTGCGAGGAGGCGTAGGC
CCTGGGCTGGGAGGTGGCGGCGGCGGTGGTGGTGGTATGCACCCCACGTT
CGATGATCCTCTGTTTGGTGGACCTCGTGGACAAGGTTACGATCCCCAAG
CACCACCAGGATCGCGGTATGATCCGGTAGGACCCGGACAAGGGGCACCG
TTTGGACGAGGACAGGGGCCGTATGGGGGACGCGGGTTTGGCGGAGGGTT
CGGGGGATTTGGTGGTGACATCATTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005038ATCC10864_005038Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005038-T1.exon1ATCC10864_005038-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005038-T1.exon2ATCC10864_005038-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005038-T1.cdsATCC10864_005038-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005038-T1ATCC10864_005038-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR021625
InterProIPR013886
PFAMPF11566
PFAMPF08577
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000138supercontigMCQH01000138:167846..168999 +
Powered by Drupal