You are here

Home

ATCC10864_005113-T1, ATCC10864_005113-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005113-T1
Unique NameATCC10864_005113-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:76749..77925+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005113-T1 ID=ATCC10864_005113-T1|Name=ATCC10864_005113-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1177bp|location=Sequence derived from alignment at MCQH01000140:76749..77925+ (Aspergillus niger ATCC 10864)
ATGCGCATGTTCAGTTTGGATTCCAGACGGATGCGACTATTACTGCGTTC
ATGGCAGCAGCAGCAACAACAGCAACAACAATGGCGGATACTGCCGGCTT
CATTACGTGCATGCTCGTCTCTTTCCGAAAGGCTACATCGAGATTTGACA
TCACGACGCCTTCCCTTGACTTTTGATTATCTACATCCCCAGCCGTCATA
CCTCCTGAGCTTAACTTTGGCCGAACTTCTTCCCACGCTAACCCCAGCGT
CAAATGAGCTTCCTTCCGCACACAGCAGATTTCCCGTGCCAGCAGGCCAC
CATCTAGTCTACTTCCCTCCCCAGGTCACGTTGTCGCAGATCCTTCCAGA
CGGTACAGACACCTTACATGCCCCAGGGAGTCCCTTTGATCGGCGCTTGT
GGGCTGGTGGAAGTGTCAGATTCTCCACTCCAAACGGCCTGGTTCTCAAT
GGCAGCCGCGCCGTTTGTATCGAAACTATTCGTGACGTGGTGATGAAGGG
CCGGTCAGGCGAAGAAAAGGTTATGGTCAGAATTGAAAGGCGGATCGGCG
CAGTTCAAGAGGGCGAAGACCATCGCAATATTAGAGAGCGGATATGGAAG
GAAGCCGAGGAAGACGTTGGCGATGCTTGTGTCATTGAGACTAGGAATCT
ATTGTTCATGCGCAAGAAGACTCCCGAGCAATTAAGTCATGACAAGGCTG
GTTTTGACATGGAAAATAGGGCTATAAGATGTGCGAGATTCCTCGAAGAT
TGCCAGTCACTAAATCTTTGCTAACGGTGCTCGGTGGCGCGTAGCACCCT
CAGGTTCATACTTTCTCCACAGACTCATACCTAACAAAACCCTGCTGTTC
CGCTTCTCGGCTCTTACTTTCAACGCTCATTCTATACATATCGACAAAAC
CTACACACAAGACGTTGAAGGCTACCGCAACCTTCTCGTACATGGCCCGT
TGACTTTGGCGTTGCTTCTCGCGGCTCTGCAGGGCCATCTGAGTAAGTTT
GAATTGGCTGTCACGCACATTGAGTATAGGAACATAGCTCCTCTATATGT
TGATGAGGAGTTGGCAGTATGCGGCAAACCCAAATCCGGAAAAGGCTACG
CAATCTGGGATGTTTGGATTGAGGGCAGGGACGGACGACTTGCCGTCCGA
GGCACCGCTTTCACTAGCCCCTTGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000140:76749..77925+

>ATCC10864_005113-T1 ID=ATCC10864_005113-T1|Name=ATCC10864_005113-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2226bp|location=Sequence derived from alignment at MCQH01000140:76749..77925+ (Aspergillus niger ATCC 10864)
ATGCGCATGTTCAGTTTGGATTCCAGACGGATGCGACTATTACTGCGTTC
ATGGCAGCAGCAGCAACAACAGCAACAACAATGGCGGATACTGCCGGCTT
CATTACGTGCATGCTCGTCTCTTTCCGAAAGGCTACATCGAGATTTGACA
TCACGACGCCTTCCCTTGACTTTTGATTATCTACATCCCCAGCCGTCATA
CCTCCTGAGCTTAACTTTGGCCGAACTTCTTCCCACGCTAACCCCAGCGT
CAAATGAGCTTCCTTCCGCACACAGCAGATTTCCCGTGCCAGCAGGCCAC
CATCTAGTCTACTTCCCTCCCCAGGTCACGTTGTCGCAGATCCTTCCAGA
CGGTACAGACACCTTACATGCCCCAGGGAGTCCCTTTGATCGGCGCTTGT
GGGCTGGTGGAAGTGTCAGATTCTCCACTCCAAACGGCCTGGTTCTCAAT
GGCAGCCGCGCCGTTTGTATCGAAACTATTCGTGACGTGGTGATGAAGGG
CCGGTCAGGCGAAGAAAAGGTTATGGTCAGAATTGAAAGGCGGATCGGCG
CAGTTCAAGAGGGCGAAGACCATCGCAATATTAGAGAGCGGATATGGAAG
GAAGCCGAGGAAGACGTTGGCGATGCTTGTGTCATTGAGACTAGGAATCT
ATTGTTCATGCGCAAGAAGACTCCCGAGCAATTAAGTCATGACAAGGCTG
GTTTTGACATGGAAAATAGGGCTATAAGATCACCCTCAGGTTCATACTTT
CTCCACAGACTCATACCTAACAAAACCCTGCTGTTCCGCTTCTCGGCTCT
TACTTTCAACGCTCATTCTATACATATCGACAAAACCTACACACAAGACG
TTGAAGGCTACCGCAACCTTCTCGTACATGGCCCGTTGACTTTGGCGTTG
CTTCTCGCGGCTCTGCAGGGCCATCTGAGTAAGTTTGAATTGGCTGTCAC
GCACATTGAGTATAGGAACATAGCTCCTCTATATGTTGATGAGGAGTTGG
CAGTATGCGGCAAACCCAAATCCGGAAAAGGCTACGCAATCTGGGATGTT
TGGATTGAGGGCAGGGACGGACGACTTGCCGTCCGAGGCACCGCTTTCAC
TAGCCCCTTGTAGATGCGCATGTTCAGTTTGGATTCCAGACGGATGCGAC
TATTACTGCGTTCATGGCAGCAGCAGCAACAACAGCAACAACAATGGCGG
ATACTGCCGGCTTCATTACGTGCATGCTCGTCTCTTTCCGAAAGGCTACA
TCGAGATTTGACATCACGACGCCTTCCCTTGACTTTTGATTATCTACATC
CCCAGCCGTCATACCTCCTGAGCTTAACTTTGGCCGAACTTCTTCCCACG
CTAACCCCAGCGTCAAATGAGCTTCCTTCCGCACACAGCAGATTTCCCGT
GCCAGCAGGCCACCATCTAGTCTACTTCCCTCCCCAGGTCACGTTGTCGC
AGATCCTTCCAGACGGTACAGACACCTTACATGCCCCAGGGAGTCCCTTT
GATCGGCGCTTGTGGGCTGGTGGAAGTGTCAGATTCTCCACTCCAAACGG
CCTGGTTCTCAATGGCAGCCGCGCCGTTTGTATCGAAACTATTCGTGACG
TGGTGATGAAGGGCCGGTCAGGCGAAGAAAAGGTTATGGTCAGAATTGAA
AGGCGGATCGGCGCAGTTCAAGAGGGCGAAGACCATCGCAATATTAGAGA
GCGGATATGGAAGGAAGCCGAGGAAGACGTTGGCGATGCTTGTGTCATTG
AGACTAGGAATCTATTGTTCATGCGCAAGAAGACTCCCGAGCAATTAAGT
CATGACAAGGCTGGTTTTGACATGGAAAATAGGGCTATAAGATCACCCTC
AGGTTCATACTTTCTCCACAGACTCATACCTAACAAAACCCTGCTGTTCC
GCTTCTCGGCTCTTACTTTCAACGCTCATTCTATACATATCGACAAAACC
TACACACAAGACGTTGAAGGCTACCGCAACCTTCTCGTACATGGCCCGTT
GACTTTGGCGTTGCTTCTCGCGGCTCTGCAGGGCCATCTGAGTAAGTTTG
AATTGGCTGTCACGCACATTGAGTATAGGAACATAGCTCCTCTATATGTT
GATGAGGAGTTGGCAGTATGCGGCAAACCCAAATCCGGAAAAGGCTACGC
AATCTGGGATGTTTGGATTGAGGGCAGGGACGGACGACTTGCCGTCCGAG
GCACCGCTTTCACTAGCCCCTTGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005113ATCC10864_005113Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005113-T1.exon1ATCC10864_005113-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005113-T1.exon2ATCC10864_005113-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005113-T1.cdsATCC10864_005113-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005113-T1ATCC10864_005113-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR029069
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:76749..77925 +
Powered by Drupal