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ATCC10864_005115-T1, ATCC10864_005115-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005115-T1
Unique NameATCC10864_005115-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:80526..82214+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005115-T1 ID=ATCC10864_005115-T1|Name=ATCC10864_005115-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1689bp|location=Sequence derived from alignment at MCQH01000140:80526..82214+ (Aspergillus niger ATCC 10864)
ATGGCGGTCGCAGTGGCTAAGGAGGAGATGGACTACTCAATCAAGCCTGA
GGCTAGTGCCTCAAAAATCGACACGTCGGAGTGGCCGCTTCTTCTGAAGA
ATTATGACAAGCGTACGTTCACTTCAAATCCACATCTCATATCAATGTAG
CTGGTGCTGATTTATAATATCAGTGCTTGTCAGGACCGGCCACTTCACGC
CAATTCCCGCTGGTAGCACTCCTCTGAAGCGTGACCTGAAGTCGTACATC
AACTCCGGTGTCATCAACCTGGACAAGCCTTCAAACCCCTCCAGTCATGA
GGTTGTTGCTTGGATGAAGAGAATCCTGAGGTAAATCTTCTATTACGTTC
TCCTCTTGTCTTCACGATACTGAGACTAGTTTTGTAAAGGGCGGAGAAGA
CTGGTCACAGCGGAACCCTCGACCCCAAGGTCACCGGTTGCTTGATTGTC
TGCATTGACCGTGCTACTCGCCTGGTGAAATCCCAACAGGGTGCCGGAAA
GGAATACGTTTGCGTGATCCGCCTACATGATAAGATCCCCGGTGGCGAGG
CTCAGTTTAAGCGGGCTCTTGAGACCTTGACTGGAGCCCTTTTCCAGCGG
CCGCCATTGATCTCTGCTGTTAAGCGTCAGCTTCGTATCCGGACAATTCA
CGAAAGCAAGCTTTACGAGTTCGATAATGAGAGGCATCTTGGTGTCTTCT
GGGTCAGCTGTGAAGCCGGAACGTACATCAGAACCCTTTGTGTCCACTTG
GGTCTTTTGCTCGGTGTTGGTGCGCACATGCAGGAACTTCGCCGTGTTCG
CAGTGGTGCCATGGATGAGAACAGTGGAATGGTGACTCTACACGACGTTT
TGGACGCCCAATGGATGTACGACAACCAGCGGGACGAGTCTTATTTGAGG
AAGGTCATCAAACCTCTGGAGACTCTTCTCACCACGTACAAGCGTATCGT
TGTCAAAGACAGTGCTGTTAACGCTGTATGCTATGGTGCTAAGCTTATGG
TCCCTGGTCTCCTCCGCTTCGGTAAGATCTTGTCTTCTCCATATGGTTCG
AATTGAATTGCTGACTCTGGTGAAGAGGCTGGTATTGAGGTCAACGAAGA
GGTAGTTCTCATGACCACTAAGGGTGAGGCTATTGCCATCGGTATCGCTC
AAATGTCGACCGTTGAGCTGTCCACCTGCGATCACGGCGTTGTGGCCAAG
GTCAAGCGTTGTATCATGGAACGCGACCTGTACCCGCGTCGCTGGGGTTT
GGGGCCTGTGGCTTTGGAGAAGAAGAAGCTCAAGTCCGCCGGAAAACTGG
ATGTAAGCTATCCTATGGAATACTCACATATGTTCTGGCTTTGCTGACAA
ATAATGCAGAAATACGGTCGTGCTAACGAGGCTACGCCTGCTAAATGGAA
GAACGACTACAAGGATTACAGCGCACCCGAAGAAGAAGGCGCACAGGCAG
TGGCTCAACCTGTTGCTCAAGAAGAAACCGCTACTCCTGCTGAGCAAACC
GAAACCCCTTCTTCTCCCAACAAGATGGATGTTGATGACGACGACGACGA
GAAGAAGAAGCGCAAGCGCCACGAAGGTGAGACGCCCGAGGAACGGGCCG
AGCGCAAGCGCAAGAAGAAGGAGAAGAAGGAAAAGAAGGAGCGCCGGAAG
TCCAAGCAGGAGAAGGAAGAGAGCGACGATAGTGATTAA
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Coding sequence (CDS) from alignment at MCQH01000140:80526..82214+

>ATCC10864_005115-T1 ID=ATCC10864_005115-T1|Name=ATCC10864_005115-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7290bp|location=Sequence derived from alignment at MCQH01000140:80526..82214+ (Aspergillus niger ATCC 10864)
ATGGCGGTCGCAGTGGCTAAGGAGGAGATGGACTACTCAATCAAGCCTGA
GGCTAGTGCCTCAAAAATCGACACGTCGGAGTGGCCGCTTCTTCTGAAGA
ATTATGACAAGCTGCTTGTCAGGACCGGCCACTTCACGCCAATTCCCGCT
GGTAGCACTCCTCTGAAGCGTGACCTGAAGTCGTACATCAACTCCGGTGT
CATCAACCTGGACAAGCCTTCAAACCCCTCCAGTCATGAGGTTGTTGCTT
GGATGAAGAGAATCCTGAGGGCGGAGAAGACTGGTCACAGCGGAACCCTC
GACCCCAAGGTCACCGGTTGCTTGATTGTCTGCATTGACCGTGCTACTCG
CCTGGTGAAATCCCAACAGGGTGCCGGAAAGGAATACGTTTGCGTGATCC
GCCTACATGATAAGATCCCCGGTGGCGAGGCTCAGTTTAAGCGGGCTCTT
GAGACCTTGACTGGAGCCCTTTTCCAGCGGCCGCCATTGATCTCTGCTGT
TAAGCGTCAGCTTCGTATCCGGACAATTCACGAAAGCAAGCTTTACGAGT
TCGATAATGAGAGGCATCTTGGTGTCTTCTGGGTCAGCTGTGAAGCCGGA
ACGTACATCAGAACCCTTTGTGTCCACTTGGGTCTTTTGCTCGGTGTTGG
TGCGCACATGCAGGAACTTCGCCGTGTTCGCAGTGGTGCCATGGATGAGA
ACAGTGGAATGGTGACTCTACACGACGTTTTGGACGCCCAATGGATGTAC
GACAACCAGCGGGACGAGTCTTATTTGAGGAAGGTCATCAAACCTCTGGA
GACTCTTCTCACCACGTACAAGCGTATCGTTGTCAAAGACAGTGCTGTTA
ACGCTGTATGCTATGGTGCTAAGCTTATGGTCCCTGGTCTCCTCCGCTTC
GAGGCTGGTATTGAGGTCAACGAAGAGGTAGTTCTCATGACCACTAAGGG
TGAGGCTATTGCCATCGGTATCGCTCAAATGTCGACCGTTGAGCTGTCCA
CCTGCGATCACGGCGTTGTGGCCAAGGTCAAGCGTTGTATCATGGAACGC
GACCTGTACCCGCGTCGCTGGGGTTTGGGGCCTGTGGCTTTGGAGAAGAA
GAAGCTCAAGTCCGCCGGAAAACTGGATAAATACGGTCGTGCTAACGAGG
CTACGCCTGCTAAATGGAAGAACGACTACAAGGATTACAGCGCACCCGAA
GAAGAAGGCGCACAGGCAGTGGCTCAACCTGTTGCTCAAGAAGAAACCGC
TACTCCTGCTGAGCAAACCGAAACCCCTTCTTCTCCCAACAAGATGGATG
TTGATGACGACGACGACGAGAAGAAGAAGCGCAAGCGCCACGAAGGTGAG
ACGCCCGAGGAACGGGCCGAGCGCAAGCGCAAGAAGAAGGAGAAGAAGGA
AAAGAAGGAGCGCCGGAAGTCCAAGCAGGAGAAGGAAGAGAGCGACGATA
GTGATTAAATGGCGGTCGCAGTGGCTAAGGAGGAGATGGACTACTCAATC
AAGCCTGAGGCTAGTGCCTCAAAAATCGACACGTCGGAGTGGCCGCTTCT
TCTGAAGAATTATGACAAGCTGCTTGTCAGGACCGGCCACTTCACGCCAA
TTCCCGCTGGTAGCACTCCTCTGAAGCGTGACCTGAAGTCGTACATCAAC
TCCGGTGTCATCAACCTGGACAAGCCTTCAAACCCCTCCAGTCATGAGGT
TGTTGCTTGGATGAAGAGAATCCTGAGGGCGGAGAAGACTGGTCACAGCG
GAACCCTCGACCCCAAGGTCACCGGTTGCTTGATTGTCTGCATTGACCGT
GCTACTCGCCTGGTGAAATCCCAACAGGGTGCCGGAAAGGAATACGTTTG
CGTGATCCGCCTACATGATAAGATCCCCGGTGGCGAGGCTCAGTTTAAGC
GGGCTCTTGAGACCTTGACTGGAGCCCTTTTCCAGCGGCCGCCATTGATC
TCTGCTGTTAAGCGTCAGCTTCGTATCCGGACAATTCACGAAAGCAAGCT
TTACGAGTTCGATAATGAGAGGCATCTTGGTGTCTTCTGGGTCAGCTGTG
AAGCCGGAACGTACATCAGAACCCTTTGTGTCCACTTGGGTCTTTTGCTC
GGTGTTGGTGCGCACATGCAGGAACTTCGCCGTGTTCGCAGTGGTGCCAT
GGATGAGAACAGTGGAATGGTGACTCTACACGACGTTTTGGACGCCCAAT
GGATGTACGACAACCAGCGGGACGAGTCTTATTTGAGGAAGGTCATCAAA
CCTCTGGAGACTCTTCTCACCACGTACAAGCGTATCGTTGTCAAAGACAG
TGCTGTTAACGCTGTATGCTATGGTGCTAAGCTTATGGTCCCTGGTCTCC
TCCGCTTCGAGGCTGGTATTGAGGTCAACGAAGAGGTAGTTCTCATGACC
ACTAAGGGTGAGGCTATTGCCATCGGTATCGCTCAAATGTCGACCGTTGA
GCTGTCCACCTGCGATCACGGCGTTGTGGCCAAGGTCAAGCGTTGTATCA
TGGAACGCGACCTGTACCCGCGTCGCTGGGGTTTGGGGCCTGTGGCTTTG
GAGAAGAAGAAGCTCAAGTCCGCCGGAAAACTGGATAAATACGGTCGTGC
TAACGAGGCTACGCCTGCTAAATGGAAGAACGACTACAAGGATTACAGCG
CACCCGAAGAAGAAGGCGCACAGGCAGTGGCTCAACCTGTTGCTCAAGAA
GAAACCGCTACTCCTGCTGAGCAAACCGAAACCCCTTCTTCTCCCAACAA
GATGGATGTTGATGACGACGACGACGAGAAGAAGAAGCGCAAGCGCCACG
AAGGTGAGACGCCCGAGGAACGGGCCGAGCGCAAGCGCAAGAAGAAGGAG
AAGAAGGAAAAGAAGGAGCGCCGGAAGTCCAAGCAGGAGAAGGAAGAGAG
CGACGATAGTGATTAAATGGCGGTCGCAGTGGCTAAGGAGGAGATGGACT
ACTCAATCAAGCCTGAGGCTAGTGCCTCAAAAATCGACACGTCGGAGTGG
CCGCTTCTTCTGAAGAATTATGACAAGCTGCTTGTCAGGACCGGCCACTT
CACGCCAATTCCCGCTGGTAGCACTCCTCTGAAGCGTGACCTGAAGTCGT
ACATCAACTCCGGTGTCATCAACCTGGACAAGCCTTCAAACCCCTCCAGT
CATGAGGTTGTTGCTTGGATGAAGAGAATCCTGAGGGCGGAGAAGACTGG
TCACAGCGGAACCCTCGACCCCAAGGTCACCGGTTGCTTGATTGTCTGCA
TTGACCGTGCTACTCGCCTGGTGAAATCCCAACAGGGTGCCGGAAAGGAA
TACGTTTGCGTGATCCGCCTACATGATAAGATCCCCGGTGGCGAGGCTCA
GTTTAAGCGGGCTCTTGAGACCTTGACTGGAGCCCTTTTCCAGCGGCCGC
CATTGATCTCTGCTGTTAAGCGTCAGCTTCGTATCCGGACAATTCACGAA
AGCAAGCTTTACGAGTTCGATAATGAGAGGCATCTTGGTGTCTTCTGGGT
CAGCTGTGAAGCCGGAACGTACATCAGAACCCTTTGTGTCCACTTGGGTC
TTTTGCTCGGTGTTGGTGCGCACATGCAGGAACTTCGCCGTGTTCGCAGT
GGTGCCATGGATGAGAACAGTGGAATGGTGACTCTACACGACGTTTTGGA
CGCCCAATGGATGTACGACAACCAGCGGGACGAGTCTTATTTGAGGAAGG
TCATCAAACCTCTGGAGACTCTTCTCACCACGTACAAGCGTATCGTTGTC
AAAGACAGTGCTGTTAACGCTGTATGCTATGGTGCTAAGCTTATGGTCCC
TGGTCTCCTCCGCTTCGAGGCTGGTATTGAGGTCAACGAAGAGGTAGTTC
TCATGACCACTAAGGGTGAGGCTATTGCCATCGGTATCGCTCAAATGTCG
ACCGTTGAGCTGTCCACCTGCGATCACGGCGTTGTGGCCAAGGTCAAGCG
TTGTATCATGGAACGCGACCTGTACCCGCGTCGCTGGGGTTTGGGGCCTG
TGGCTTTGGAGAAGAAGAAGCTCAAGTCCGCCGGAAAACTGGATAAATAC
GGTCGTGCTAACGAGGCTACGCCTGCTAAATGGAAGAACGACTACAAGGA
TTACAGCGCACCCGAAGAAGAAGGCGCACAGGCAGTGGCTCAACCTGTTG
CTCAAGAAGAAACCGCTACTCCTGCTGAGCAAACCGAAACCCCTTCTTCT
CCCAACAAGATGGATGTTGATGACGACGACGACGAGAAGAAGAAGCGCAA
GCGCCACGAAGGTGAGACGCCCGAGGAACGGGCCGAGCGCAAGCGCAAGA
AGAAGGAGAAGAAGGAAAAGAAGGAGCGCCGGAAGTCCAAGCAGGAGAAG
GAAGAGAGCGACGATAGTGATTAAATGGCGGTCGCAGTGGCTAAGGAGGA
GATGGACTACTCAATCAAGCCTGAGGCTAGTGCCTCAAAAATCGACACGT
CGGAGTGGCCGCTTCTTCTGAAGAATTATGACAAGCTGCTTGTCAGGACC
GGCCACTTCACGCCAATTCCCGCTGGTAGCACTCCTCTGAAGCGTGACCT
GAAGTCGTACATCAACTCCGGTGTCATCAACCTGGACAAGCCTTCAAACC
CCTCCAGTCATGAGGTTGTTGCTTGGATGAAGAGAATCCTGAGGGCGGAG
AAGACTGGTCACAGCGGAACCCTCGACCCCAAGGTCACCGGTTGCTTGAT
TGTCTGCATTGACCGTGCTACTCGCCTGGTGAAATCCCAACAGGGTGCCG
GAAAGGAATACGTTTGCGTGATCCGCCTACATGATAAGATCCCCGGTGGC
GAGGCTCAGTTTAAGCGGGCTCTTGAGACCTTGACTGGAGCCCTTTTCCA
GCGGCCGCCATTGATCTCTGCTGTTAAGCGTCAGCTTCGTATCCGGACAA
TTCACGAAAGCAAGCTTTACGAGTTCGATAATGAGAGGCATCTTGGTGTC
TTCTGGGTCAGCTGTGAAGCCGGAACGTACATCAGAACCCTTTGTGTCCA
CTTGGGTCTTTTGCTCGGTGTTGGTGCGCACATGCAGGAACTTCGCCGTG
TTCGCAGTGGTGCCATGGATGAGAACAGTGGAATGGTGACTCTACACGAC
GTTTTGGACGCCCAATGGATGTACGACAACCAGCGGGACGAGTCTTATTT
GAGGAAGGTCATCAAACCTCTGGAGACTCTTCTCACCACGTACAAGCGTA
TCGTTGTCAAAGACAGTGCTGTTAACGCTGTATGCTATGGTGCTAAGCTT
ATGGTCCCTGGTCTCCTCCGCTTCGAGGCTGGTATTGAGGTCAACGAAGA
GGTAGTTCTCATGACCACTAAGGGTGAGGCTATTGCCATCGGTATCGCTC
AAATGTCGACCGTTGAGCTGTCCACCTGCGATCACGGCGTTGTGGCCAAG
GTCAAGCGTTGTATCATGGAACGCGACCTGTACCCGCGTCGCTGGGGTTT
GGGGCCTGTGGCTTTGGAGAAGAAGAAGCTCAAGTCCGCCGGAAAACTGG
ATAAATACGGTCGTGCTAACGAGGCTACGCCTGCTAAATGGAAGAACGAC
TACAAGGATTACAGCGCACCCGAAGAAGAAGGCGCACAGGCAGTGGCTCA
ACCTGTTGCTCAAGAAGAAACCGCTACTCCTGCTGAGCAAACCGAAACCC
CTTCTTCTCCCAACAAGATGGATGTTGATGACGACGACGACGAGAAGAAG
AAGCGCAAGCGCCACGAAGGTGAGACGCCCGAGGAACGGGCCGAGCGCAA
GCGCAAGAAGAAGGAGAAGAAGGAAAAGAAGGAGCGCCGGAAGTCCAAGC
AGGAGAAGGAAGAGAGCGACGATAGTGATTAAATGGCGGTCGCAGTGGCT
AAGGAGGAGATGGACTACTCAATCAAGCCTGAGGCTAGTGCCTCAAAAAT
CGACACGTCGGAGTGGCCGCTTCTTCTGAAGAATTATGACAAGCTGCTTG
TCAGGACCGGCCACTTCACGCCAATTCCCGCTGGTAGCACTCCTCTGAAG
CGTGACCTGAAGTCGTACATCAACTCCGGTGTCATCAACCTGGACAAGCC
TTCAAACCCCTCCAGTCATGAGGTTGTTGCTTGGATGAAGAGAATCCTGA
GGGCGGAGAAGACTGGTCACAGCGGAACCCTCGACCCCAAGGTCACCGGT
TGCTTGATTGTCTGCATTGACCGTGCTACTCGCCTGGTGAAATCCCAACA
GGGTGCCGGAAAGGAATACGTTTGCGTGATCCGCCTACATGATAAGATCC
CCGGTGGCGAGGCTCAGTTTAAGCGGGCTCTTGAGACCTTGACTGGAGCC
CTTTTCCAGCGGCCGCCATTGATCTCTGCTGTTAAGCGTCAGCTTCGTAT
CCGGACAATTCACGAAAGCAAGCTTTACGAGTTCGATAATGAGAGGCATC
TTGGTGTCTTCTGGGTCAGCTGTGAAGCCGGAACGTACATCAGAACCCTT
TGTGTCCACTTGGGTCTTTTGCTCGGTGTTGGTGCGCACATGCAGGAACT
TCGCCGTGTTCGCAGTGGTGCCATGGATGAGAACAGTGGAATGGTGACTC
TACACGACGTTTTGGACGCCCAATGGATGTACGACAACCAGCGGGACGAG
TCTTATTTGAGGAAGGTCATCAAACCTCTGGAGACTCTTCTCACCACGTA
CAAGCGTATCGTTGTCAAAGACAGTGCTGTTAACGCTGTATGCTATGGTG
CTAAGCTTATGGTCCCTGGTCTCCTCCGCTTCGAGGCTGGTATTGAGGTC
AACGAAGAGGTAGTTCTCATGACCACTAAGGGTGAGGCTATTGCCATCGG
TATCGCTCAAATGTCGACCGTTGAGCTGTCCACCTGCGATCACGGCGTTG
TGGCCAAGGTCAAGCGTTGTATCATGGAACGCGACCTGTACCCGCGTCGC
TGGGGTTTGGGGCCTGTGGCTTTGGAGAAGAAGAAGCTCAAGTCCGCCGG
AAAACTGGATAAATACGGTCGTGCTAACGAGGCTACGCCTGCTAAATGGA
AGAACGACTACAAGGATTACAGCGCACCCGAAGAAGAAGGCGCACAGGCA
GTGGCTCAACCTGTTGCTCAAGAAGAAACCGCTACTCCTGCTGAGCAAAC
CGAAACCCCTTCTTCTCCCAACAAGATGGATGTTGATGACGACGACGACG
AGAAGAAGAAGCGCAAGCGCCACGAAGGTGAGACGCCCGAGGAACGGGCC
GAGCGCAAGCGCAAGAAGAAGGAGAAGAAGGAAAAGAAGGAGCGCCGGAA
GTCCAAGCAGGAGAAGGAAGAGAGCGACGATAGTGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0001522pseudouridine synthesis
GO:0006396RNA processing
GO:0009451RNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0009982pseudouridine synthase activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBF5ATCC10864_005115Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005115-T1ATCC10864_005115-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005115-T1.exon1ATCC10864_005115-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005115-T1.exon2ATCC10864_005115-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005115-T1.exon3ATCC10864_005115-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005115-T1.exon4ATCC10864_005115-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005115-T1.exon5ATCC10864_005115-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005115-T1.cdsATCC10864_005115-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR004521
PFAMPF08068
PFAMPF01509
InterProIPR012960
PFAMPF16198
InterProIPR020103
InterProIPR002501
InterProIPR015947
PFAMPF01472
InterProIPR032819
InterProIPR004802
InterProIPR036974
InterProIPR002478
Properties
Property NameValue
NoteBUSCO:EOG0926273Q
Productcentromere/microtubule-binding protein cbf5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:80526..82214 +
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