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ATCC10864_005116-T1, ATCC10864_005116-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005116-T1
Unique NameATCC10864_005116-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:82679..84099+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005116-T1 ID=ATCC10864_005116-T1|Name=ATCC10864_005116-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1421bp|location=Sequence derived from alignment at MCQH01000140:82679..84099+ (Aspergillus niger ATCC 10864)
ATGGCTGCGGAACTTACTTCAACTCGGCTCAATGCGGAGAACCATCTGCT
CTTGGTATTGAACTCTTCGCCCCCTACCTATTGCTGGCTTGCACCCCATT
CTGATACTAATTCTGTCGACTACTTGCAGGACCAACCTCTCCTGCGCTTA
CCACATGAGCTTGCACGTCGGAACTTCAAGTCTGTTCAGCGCCTCGTCGA
GCGAGAAAAGGAGTACGTCCTCCCCGCACTCAAGGAGACCGCCAATGCAT
CCTTATCAAATGAGCAAACGCCTGACCAAGCTCTTGCTGCGCTCGATGCT
ATGATTTCCCGCATGCAAGGCTTGAAACGGAAAATGGAGAATCTACATCA
GGAGGAAAGAAAAATTCAAGAGCAGTCCCGGAAGCGTATCCAGCACCTAG
AGAAACTTCACCAGATTCCTAGCTTGGCAGACGTCCAATACGATCAGTGG
GCGAGGGTCCGTTTGGACAGGCTCATGATAGATCATATGTTACGTTCCGG
ATATATCAAAAGTGCCCAGCAATTAGCTCGTGAAAAGGGGATCGAGGATC
TTGTAGATCTCAACGTTTTCGTTCAGTGTCAACGGATTGCCGAGAGCCTA
CGCACTGGTGAAACGAAGGATGCCCTGCAATGGTGTGGCGAGAATAAAGC
AGCGCTGAAGAAGAGTCAGGTTTGTCTAACATCCAACAATGATCACGGAG
CTATATGCCAGAGTCCAATTTTAACCCAAAATTACAGTATAATCTGGAAT
TCGAACTCCGATTGCAGCAATACATTGAAATGGTCAGGGCGGGGCATAAA
GAGAGATTCAACGACGCTATGATCCACGCCAAAAGATATCTAGCGCCTTA
TCTTGAGACACAGTCGGTGGAGATTCATCGAGCTGCAGGACTCCTCGCTT
TTCCTCCGGACACCAAAGCTGAGCCGTACAAGGTAATGGGGATATTGAAC
ACACTCTCAGGAAAACTGTACAAACTAACTCACCCCTAGTCGATGTATGC
TCACGAGCGATGGGCCTATCTTTCCGACCTCTTTGTCCGCACTCACCATG
AGCTTTTGTCACTATCTTCTCGTCCTTTGTTACACATCGCTCTGTCTGCG
GGATTGTCGGCTCTCAAAACTCCTTCGTGCCATTCGGCCTATACCTCCTC
CAGTTCGAATTCGTTGTCCACAACAACATCTGTTTGTCCAATTTGTTCGA
CCGAGCTTAACGAGCTCGCACGTAACATGCCATATGCTCACCACACGAAG
AGCTACGTTGAGAACGACCCGATTGTGCTCCCAAATGGCAGGATTTACGG
CCAGCAACGGCTGTTGGAGATGAGCAAGAAAGTCGGTTGTGTTGAGGTTG
GTAAAGTAAAGGACCCTACGACAGGTGAAGTATTCAACGAGGGTGATATG
AAGAAAGTCTACATCATGTAA
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Coding sequence (CDS) from alignment at MCQH01000140:82679..84099+

>ATCC10864_005116-T1 ID=ATCC10864_005116-T1|Name=ATCC10864_005116-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4884bp|location=Sequence derived from alignment at MCQH01000140:82679..84099+ (Aspergillus niger ATCC 10864)
ATGGCTGCGGAACTTACTTCAACTCGGCTCAATGCGGAGAACCATCTGCT
CTTGGACCAACCTCTCCTGCGCTTACCACATGAGCTTGCACGTCGGAACT
TCAAGTCTGTTCAGCGCCTCGTCGAGCGAGAAAAGGAGTACGTCCTCCCC
GCACTCAAGGAGACCGCCAATGCATCCTTATCAAATGAGCAAACGCCTGA
CCAAGCTCTTGCTGCGCTCGATGCTATGATTTCCCGCATGCAAGGCTTGA
AACGGAAAATGGAGAATCTACATCAGGAGGAAAGAAAAATTCAAGAGCAG
TCCCGGAAGCGTATCCAGCACCTAGAGAAACTTCACCAGATTCCTAGCTT
GGCAGACGTCCAATACGATCAGTGGGCGAGGGTCCGTTTGGACAGGCTCA
TGATAGATCATATGTTACGTTCCGGATATATCAAAAGTGCCCAGCAATTA
GCTCGTGAAAAGGGGATCGAGGATCTTGTAGATCTCAACGTTTTCGTTCA
GTGTCAACGGATTGCCGAGAGCCTACGCACTGGTGAAACGAAGGATGCCC
TGCAATGGTGTGGCGAGAATAAAGCAGCGCTGAAGAAGAGTCAGTATAAT
CTGGAATTCGAACTCCGATTGCAGCAATACATTGAAATGGTCAGGGCGGG
GCATAAAGAGAGATTCAACGACGCTATGATCCACGCCAAAAGATATCTAG
CGCCTTATCTTGAGACACAGTCGGTGGAGATTCATCGAGCTGCAGGACTC
CTCGCTTTTCCTCCGGACACCAAAGCTGAGCCGTACAAGTCGATGTATGC
TCACGAGCGATGGGCCTATCTTTCCGACCTCTTTGTCCGCACTCACCATG
AGCTTTTGTCACTATCTTCTCGTCCTTTGTTACACATCGCTCTGTCTGCG
GGATTGTCGGCTCTCAAAACTCCTTCGTGCCATTCGGCCTATACCTCCTC
CAGTTCGAATTCGTTGTCCACAACAACATCTGTTTGTCCAATTTGTTCGA
CCGAGCTTAACGAGCTCGCACGTAACATGCCATATGCTCACCACACGAAG
AGCTACGTTGAGAACGACCCGATTGTGCTCCCAAATGGCAGGATTTACGG
CCAGCAACGGCTGTTGGAGATGAGCAAGAAAGTCGGTTGTGTTGAGGTTG
GTAAAGTAAAGGACCCTACGACAGGTGAAGTATTCAACGAGGGTGATATG
AAGAAAGTCTACATCATGTAAATGGCTGCGGAACTTACTTCAACTCGGCT
CAATGCGGAGAACCATCTGCTCTTGGACCAACCTCTCCTGCGCTTACCAC
ATGAGCTTGCACGTCGGAACTTCAAGTCTGTTCAGCGCCTCGTCGAGCGA
GAAAAGGAGTACGTCCTCCCCGCACTCAAGGAGACCGCCAATGCATCCTT
ATCAAATGAGCAAACGCCTGACCAAGCTCTTGCTGCGCTCGATGCTATGA
TTTCCCGCATGCAAGGCTTGAAACGGAAAATGGAGAATCTACATCAGGAG
GAAAGAAAAATTCAAGAGCAGTCCCGGAAGCGTATCCAGCACCTAGAGAA
ACTTCACCAGATTCCTAGCTTGGCAGACGTCCAATACGATCAGTGGGCGA
GGGTCCGTTTGGACAGGCTCATGATAGATCATATGTTACGTTCCGGATAT
ATCAAAAGTGCCCAGCAATTAGCTCGTGAAAAGGGGATCGAGGATCTTGT
AGATCTCAACGTTTTCGTTCAGTGTCAACGGATTGCCGAGAGCCTACGCA
CTGGTGAAACGAAGGATGCCCTGCAATGGTGTGGCGAGAATAAAGCAGCG
CTGAAGAAGAGTCAGTATAATCTGGAATTCGAACTCCGATTGCAGCAATA
CATTGAAATGGTCAGGGCGGGGCATAAAGAGAGATTCAACGACGCTATGA
TCCACGCCAAAAGATATCTAGCGCCTTATCTTGAGACACAGTCGGTGGAG
ATTCATCGAGCTGCAGGACTCCTCGCTTTTCCTCCGGACACCAAAGCTGA
GCCGTACAAGTCGATGTATGCTCACGAGCGATGGGCCTATCTTTCCGACC
TCTTTGTCCGCACTCACCATGAGCTTTTGTCACTATCTTCTCGTCCTTTG
TTACACATCGCTCTGTCTGCGGGATTGTCGGCTCTCAAAACTCCTTCGTG
CCATTCGGCCTATACCTCCTCCAGTTCGAATTCGTTGTCCACAACAACAT
CTGTTTGTCCAATTTGTTCGACCGAGCTTAACGAGCTCGCACGTAACATG
CCATATGCTCACCACACGAAGAGCTACGTTGAGAACGACCCGATTGTGCT
CCCAAATGGCAGGATTTACGGCCAGCAACGGCTGTTGGAGATGAGCAAGA
AAGTCGGTTGTGTTGAGGTTGGTAAAGTAAAGGACCCTACGACAGGTGAA
GTATTCAACGAGGGTGATATGAAGAAAGTCTACATCATGTAAATGGCTGC
GGAACTTACTTCAACTCGGCTCAATGCGGAGAACCATCTGCTCTTGGACC
AACCTCTCCTGCGCTTACCACATGAGCTTGCACGTCGGAACTTCAAGTCT
GTTCAGCGCCTCGTCGAGCGAGAAAAGGAGTACGTCCTCCCCGCACTCAA
GGAGACCGCCAATGCATCCTTATCAAATGAGCAAACGCCTGACCAAGCTC
TTGCTGCGCTCGATGCTATGATTTCCCGCATGCAAGGCTTGAAACGGAAA
ATGGAGAATCTACATCAGGAGGAAAGAAAAATTCAAGAGCAGTCCCGGAA
GCGTATCCAGCACCTAGAGAAACTTCACCAGATTCCTAGCTTGGCAGACG
TCCAATACGATCAGTGGGCGAGGGTCCGTTTGGACAGGCTCATGATAGAT
CATATGTTACGTTCCGGATATATCAAAAGTGCCCAGCAATTAGCTCGTGA
AAAGGGGATCGAGGATCTTGTAGATCTCAACGTTTTCGTTCAGTGTCAAC
GGATTGCCGAGAGCCTACGCACTGGTGAAACGAAGGATGCCCTGCAATGG
TGTGGCGAGAATAAAGCAGCGCTGAAGAAGAGTCAGTATAATCTGGAATT
CGAACTCCGATTGCAGCAATACATTGAAATGGTCAGGGCGGGGCATAAAG
AGAGATTCAACGACGCTATGATCCACGCCAAAAGATATCTAGCGCCTTAT
CTTGAGACACAGTCGGTGGAGATTCATCGAGCTGCAGGACTCCTCGCTTT
TCCTCCGGACACCAAAGCTGAGCCGTACAAGTCGATGTATGCTCACGAGC
GATGGGCCTATCTTTCCGACCTCTTTGTCCGCACTCACCATGAGCTTTTG
TCACTATCTTCTCGTCCTTTGTTACACATCGCTCTGTCTGCGGGATTGTC
GGCTCTCAAAACTCCTTCGTGCCATTCGGCCTATACCTCCTCCAGTTCGA
ATTCGTTGTCCACAACAACATCTGTTTGTCCAATTTGTTCGACCGAGCTT
AACGAGCTCGCACGTAACATGCCATATGCTCACCACACGAAGAGCTACGT
TGAGAACGACCCGATTGTGCTCCCAAATGGCAGGATTTACGGCCAGCAAC
GGCTGTTGGAGATGAGCAAGAAAGTCGGTTGTGTTGAGGTTGGTAAAGTA
AAGGACCCTACGACAGGTGAAGTATTCAACGAGGGTGATATGAAGAAAGT
CTACATCATGTAAATGGCTGCGGAACTTACTTCAACTCGGCTCAATGCGG
AGAACCATCTGCTCTTGGACCAACCTCTCCTGCGCTTACCACATGAGCTT
GCACGTCGGAACTTCAAGTCTGTTCAGCGCCTCGTCGAGCGAGAAAAGGA
GTACGTCCTCCCCGCACTCAAGGAGACCGCCAATGCATCCTTATCAAATG
AGCAAACGCCTGACCAAGCTCTTGCTGCGCTCGATGCTATGATTTCCCGC
ATGCAAGGCTTGAAACGGAAAATGGAGAATCTACATCAGGAGGAAAGAAA
AATTCAAGAGCAGTCCCGGAAGCGTATCCAGCACCTAGAGAAACTTCACC
AGATTCCTAGCTTGGCAGACGTCCAATACGATCAGTGGGCGAGGGTCCGT
TTGGACAGGCTCATGATAGATCATATGTTACGTTCCGGATATATCAAAAG
TGCCCAGCAATTAGCTCGTGAAAAGGGGATCGAGGATCTTGTAGATCTCA
ACGTTTTCGTTCAGTGTCAACGGATTGCCGAGAGCCTACGCACTGGTGAA
ACGAAGGATGCCCTGCAATGGTGTGGCGAGAATAAAGCAGCGCTGAAGAA
GAGTCAGTATAATCTGGAATTCGAACTCCGATTGCAGCAATACATTGAAA
TGGTCAGGGCGGGGCATAAAGAGAGATTCAACGACGCTATGATCCACGCC
AAAAGATATCTAGCGCCTTATCTTGAGACACAGTCGGTGGAGATTCATCG
AGCTGCAGGACTCCTCGCTTTTCCTCCGGACACCAAAGCTGAGCCGTACA
AGTCGATGTATGCTCACGAGCGATGGGCCTATCTTTCCGACCTCTTTGTC
CGCACTCACCATGAGCTTTTGTCACTATCTTCTCGTCCTTTGTTACACAT
CGCTCTGTCTGCGGGATTGTCGGCTCTCAAAACTCCTTCGTGCCATTCGG
CCTATACCTCCTCCAGTTCGAATTCGTTGTCCACAACAACATCTGTTTGT
CCAATTTGTTCGACCGAGCTTAACGAGCTCGCACGTAACATGCCATATGC
TCACCACACGAAGAGCTACGTTGAGAACGACCCGATTGTGCTCCCAAATG
GCAGGATTTACGGCCAGCAACGGCTGTTGGAGATGAGCAAGAAAGTCGGT
TGTGTTGAGGTTGGTAAAGTAAAGGACCCTACGACAGGTGAAGTATTCAA
CGAGGGTGATATGAAGAAAGTCTACATCATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0061630ubiquitin protein ligase activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0045721negative regulation of gluconeogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FYV10ATCC10864_005116Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005116-T1.exon1ATCC10864_005116-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005116-T1.exon2ATCC10864_005116-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005116-T1.exon3ATCC10864_005116-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005116-T1.exon4ATCC10864_005116-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005116-T1.cdsATCC10864_005116-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005116-T1ATCC10864_005116-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR006595
InterProIPR024964
InterProIPR044063
InterProIPR013144
InterProIPR027714
InterProIPR006594
PFAMPF10607
Properties
Property NameValue
NoteBUSCO:EOG09261O7R
ProductGID complex subunit containing RING finger motif
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:82679..84099 +
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