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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000140:141281..142612+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005135-T1 ID=ATCC10864_005135-T1|Name=ATCC10864_005135-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1332bp|location=Sequence derived from alignment at MCQH01000140:141281..142612+ (Aspergillus niger ATCC 10864) ATGGTCTCGAAGAAAGCATCTCACCGCCCGCCCCCGGGTGCCGGCCTCGA
CGCAAAGCCCCGCAATAAAATCCAGCGTCAACTCCTGCATATCAAGCGCA
AGCGCGCCAAGGACTCTTCTCGTCGTGCCGAACGGTATGCCTTCAAGAAG
GAAGAGGCCAAGAACCCCAAGCTGAAGGAGGAGCGTCTGAAGCGCAATAT
CCCCTTGACTATCGACCGCAAGCGAGTCTGGGATGACGCCGGCAGCGACG
TCGAGGACGGTCTGGGACTGAGTGTGGACGTTGAGCGCATCAAGCGGCGC
AAGCAAGAGGAAGAGGAGGAGCTGAACCGGCCCCTGAACGAGGATGAACA
GTCTTCCGACGCCGAAGAAGGATCAGAGGATGACGACGACGACGATGTGG
ACAGCATGCTCGCCAGCAGCGACGAGGAAGACGAAGACGCCTCCGACGAC
GAAGATGCAGACTCGGATTCCGGCAAGAAGAAATCCTCCTCCGAGACTCG
CGGGCGCAGCAAATCATCCCTCCCAACAGCCACAGAGCGCGCAACCAGCC
CCTCTCAATCGACCAAGAGCACCAACCTAAGTCTAGTCCCCGACGCTCTA
GCGGCCAAATTCCCCTCCCTCTTCAGCACCGAGAACCCCAAGTCCCCCAA
AATCCTCATCACGACGTCCCTAAACTCGTCCCTCCACCACGAAGCCGAGC
TCCTCACCGACCTGTTCCCCAACTCCGTTTACGTCCGCCGCACACGCCAC
CGCTTCGCGCATCAATTCTCCATCCGCGAGATCTCCAAATTCGCCACGAA
CCGCAACTTCACGGCGGTGGTGATCCTCCGCGAAGACCAGAAGAAGCCGG
CCGGTCTGGACATCGTGCATCTCCCCACGGGACCCATGTTCCACTTCTCC
ATGACGAACTGGGTCGAGGGCAAGCGCATCCCAGGCCACGGGCGCGCCAC
GGAGCACTGGCCCGAGTTGATCTTGAACAACTTCCGCACGCCGTTGGGTC
TGTTGACGGCGCACTTGTTCCGGACGTTGTTCCCACCGCAGCCGGATATC
GAGGGCCGGCAGGTCGTGACGGTTCTGAATAGTCGCGATTATCTGTTCTT
CCGTCGTCATCGGTATGTGTTCCGTGAGAAGAGGGAGACGGAGAAGGCGG
TTGTGGGATCTGATGGAAAGGAGATGAAGGGCGCGGAGGGAATCAGGGCG
GGTATGCAGGAATTGGGACCCCGGTTTACGTTGAAGTTGCGCAGAGTGGA
TAAGGGGATTCAGAGAGCTAGTGGGCAGGAGTGGGAGTGGAAGGGGCAAA
TGGAGAAGACGAGGACGAAGTTCCAGCTATAG back to topCoding sequence (CDS) from alignment at MCQH01000140:141281..142612+ >ATCC10864_005135-T1 ID=ATCC10864_005135-T1|Name=ATCC10864_005135-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1332bp|location=Sequence derived from alignment at MCQH01000140:141281..142612+ (Aspergillus niger ATCC 10864) ATGGTCTCGAAGAAAGCATCTCACCGCCCGCCCCCGGGTGCCGGCCTCGA CGCAAAGCCCCGCAATAAAATCCAGCGTCAACTCCTGCATATCAAGCGCA AGCGCGCCAAGGACTCTTCTCGTCGTGCCGAACGGTATGCCTTCAAGAAG GAAGAGGCCAAGAACCCCAAGCTGAAGGAGGAGCGTCTGAAGCGCAATAT CCCCTTGACTATCGACCGCAAGCGAGTCTGGGATGACGCCGGCAGCGACG TCGAGGACGGTCTGGGACTGAGTGTGGACGTTGAGCGCATCAAGCGGCGC AAGCAAGAGGAAGAGGAGGAGCTGAACCGGCCCCTGAACGAGGATGAACA GTCTTCCGACGCCGAAGAAGGATCAGAGGATGACGACGACGACGATGTGG ACAGCATGCTCGCCAGCAGCGACGAGGAAGACGAAGACGCCTCCGACGAC GAAGATGCAGACTCGGATTCCGGCAAGAAGAAATCCTCCTCCGAGACTCG CGGGCGCAGCAAATCATCCCTCCCAACAGCCACAGAGCGCGCAACCAGCC CCTCTCAATCGACCAAGAGCACCAACCTAAGTCTAGTCCCCGACGCTCTA GCGGCCAAATTCCCCTCCCTCTTCAGCACCGAGAACCCCAAGTCCCCCAA AATCCTCATCACGACGTCCCTAAACTCGTCCCTCCACCACGAAGCCGAGC TCCTCACCGACCTGTTCCCCAACTCCGTTTACGTCCGCCGCACACGCCAC CGCTTCGCGCATCAATTCTCCATCCGCGAGATCTCCAAATTCGCCACGAA CCGCAACTTCACGGCGGTGGTGATCCTCCGCGAAGACCAGAAGAAGCCGG CCGGTCTGGACATCGTGCATCTCCCCACGGGACCCATGTTCCACTTCTCC ATGACGAACTGGGTCGAGGGCAAGCGCATCCCAGGCCACGGGCGCGCCAC GGAGCACTGGCCCGAGTTGATCTTGAACAACTTCCGCACGCCGTTGGGTC TGTTGACGGCGCACTTGTTCCGGACGTTGTTCCCACCGCAGCCGGATATC GAGGGCCGGCAGGTCGTGACGGTTCTGAATAGTCGCGATTATCTGTTCTT CCGTCGTCATCGGTATGTGTTCCGTGAGAAGAGGGAGACGGAGAAGGCGG TTGTGGGATCTGATGGAAAGGAGATGAAGGGCGCGGAGGGAATCAGGGCG GGTATGCAGGAATTGGGACCCCGGTTTACGTTGAAGTTGCGCAGAGTGGA TAAGGGGATTCAGAGAGCTAGTGGGCAGGAGTGGGAGTGGAAGGGGCAAA TGGAGAAGACGAGGACGAAGTTCCAGCTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0006364 | rRNA processing |
Vocabulary: Molecular Function
Term | Definition |
GO:0019843 | rRNA binding |
GO:0042134 | rRNA primary transcript binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
Database | Accession |
InterPro | IPR007109 |
InterPro | IPR044281 |
PFAM | PF04427 |
Properties
Property Name | Value |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
MCQH01000140 | supercontig | MCQH01000140:141281..142612 + |
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