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ATCC10864_005138-T1, ATCC10864_005138-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005138-T1
Unique NameATCC10864_005138-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:146699..147922-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005138-T1 ID=ATCC10864_005138-T1|Name=ATCC10864_005138-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1224bp|location=Sequence derived from alignment at MCQH01000140:146699..147922- (Aspergillus niger ATCC 10864)
ATGTCTTGGGCAGGTGCGCTGAATACACCCCCGTTCCTACCTATCGATGG
ATCCTGCGCTATAGGGACCCATTCTCTCTCTCTCTCGTCTGACTTGTCAT
TCTTACTGGGTCTACAGGATTCAAGAAAAATGTCAACCGCGCTACCACGC
AGGTGATGATGAAGACGGGTATGTTGGATCAGGGCCCCCGCTCGAGTCGA
GGATGGAGAAACTCTCCGATATATGTGCATTATTGCTTGCTTGTGCTAGG
TGGAATTCACTGACGCACTGGCTTGGGTTGAACAGGACATGTGGAGCGCA
CAAGTGATCGCGATTATGAGATTGAAGAGCGGTATGGATAGTCTGACTGA
TTGGATATGAGGGGATCTTGTTTGGCTAATATGGACACGATGCGTTACAG
TCGGTACCGGACGATGGAAGCCGCCGCAAACCGGTTACAGAAAGAGGCAA
AGGGATACTTGGATTCGCTACGAGGTGTGTTTTGATGTTCCGGTCGCTAG
AATGTTGGTTATGATGCGGAGTCGGATGCTGACATCGGACGGTGATGGAC
AGCTATGACTGCCTCGCAGATGCGGATTGCTGAGACTATTGATGCCTTCT
ATGGCGATGCCGGAACAAATGATGGCGTGAGTCGGAGTTATAAGCAGGCT
GTGGAGGATCTGGATGCGGAAACGATCAAGGCGCTGGACGGCCCGTACCG
GTATGTTGGATCTATTGCTGTGGACGCCCTTTTTTGGCATTGCGACTCAT
GTGTTGACTGGTATTCGTAGCTCGACTGTGTTGGAGCCCATCTCTCGGTT
CTGTGCCTACTTCCCGGATATCAACGAGTGCATTAAGAAGCGCAACCACA
AGTTACTCGATTACGATTCGATGCGCGCCAAGGTCAAGAAGCTGGTTGAG
AAGCCCGATAAGGATGCGACGAAACTGCCTCGGATGGAGCGCGAGACGGA
AATTGCCAAGCAAGCGTATGAGCAGTTGAACGAACAGCTCTTCACCGAAC
TTCCTCAGCTCATTGACCTGCGGGTACCCTACCTGGATCCTAGCTTCGAG
GCTCTGGTGAAGATTCAATTGCGGTTCTGCGCGGAGGCATATTCGCGCAT
GGCGCAGGTGCAACAGTACTTGGATGCGGAGACGAGGGATCAGTATGCCC
GGGGAGACCTGGACAACCGGGTGGAAGAAGTGTTGCAGGAGATTCGGGAT
CTGAGCATAGCAGGCACGGTCTGA
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Coding sequence (CDS) from alignment at MCQH01000140:146699..147922-

>ATCC10864_005138-T1 ID=ATCC10864_005138-T1|Name=ATCC10864_005138-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4716bp|location=Sequence derived from alignment at MCQH01000140:146699..147922- (Aspergillus niger ATCC 10864)
CTCGACTGTGTTGGAGCCCATCTCTCGGTTCTGTGCCTACTTCCCGGATA
TCAACGAGTGCATTAAGAAGCGCAACCACAAGTTACTCGATTACGATTCG
ATGCGCGCCAAGGTCAAGAAGCTGGTTGAGAAGCCCGATAAGGATGCGAC
GAAACTGCCTCGGATGGAGCGCGAGACGGAAATTGCCAAGCAAGCGTATG
AGCAGTTGAACGAACAGCTCTTCACCGAACTTCCTCAGCTCATTGACCTG
CGGGTACCCTACCTGGATCCTAGCTTCGAGGCTCTGGTGAAGATTCAATT
GCGGTTCTGCGCGGAGGCATATTCGCGCATGGCGCAGGTGCAACAGTACT
TGGATGCGGAGACGAGGGATCAGTATGCCCGGGGAGACCTGGACAACCGG
GTGGAAGAAGTGTTGCAGGAGATTCGGGATCTGAGCATAGCAGGCACGGT
CTGACTATGACTGCCTCGCAGATGCGGATTGCTGAGACTATTGATGCCTT
CTATGGCGATGCCGGAACAAATGATGGCGTGAGTCGGAGTTATAAGCAGG
CTGTGGAGGATCTGGATGCGGAAACGATCAAGGCGCTGGACGGCCCGTAC
CGTCGGTACCGGACGATGGAAGCCGCCGCAAACCGGTTACAGAAAGAGGC
AAAGGGATACTTGGATTCGCTACGAGGACATGTGGAGCGCACAAGTGATC
GCGATTATGAGATTGAAGAGCGGATTCAAGAAAAATGTCAACCGCGCTAC
CACGCAGGTGATGATGAAGACGGATGTCTTGGGCAGCTCGACTGTGTTGG
AGCCCATCTCTCGGTTCTGTGCCTACTTCCCGGATATCAACGAGTGCATT
AAGAAGCGCAACCACAAGTTACTCGATTACGATTCGATGCGCGCCAAGGT
CAAGAAGCTGGTTGAGAAGCCCGATAAGGATGCGACGAAACTGCCTCGGA
TGGAGCGCGAGACGGAAATTGCCAAGCAAGCGTATGAGCAGTTGAACGAA
CAGCTCTTCACCGAACTTCCTCAGCTCATTGACCTGCGGGTACCCTACCT
GGATCCTAGCTTCGAGGCTCTGGTGAAGATTCAATTGCGGTTCTGCGCGG
AGGCATATTCGCGCATGGCGCAGGTGCAACAGTACTTGGATGCGGAGACG
AGGGATCAGTATGCCCGGGGAGACCTGGACAACCGGGTGGAAGAAGTGTT
GCAGGAGATTCGGGATCTGAGCATAGCAGGCACGGTCTGACTATGACTGC
CTCGCAGATGCGGATTGCTGAGACTATTGATGCCTTCTATGGCGATGCCG
GAACAAATGATGGCGTGAGTCGGAGTTATAAGCAGGCTGTGGAGGATCTG
GATGCGGAAACGATCAAGGCGCTGGACGGCCCGTACCGTCGGTACCGGAC
GATGGAAGCCGCCGCAAACCGGTTACAGAAAGAGGCAAAGGGATACTTGG
ATTCGCTACGAGGACATGTGGAGCGCACAAGTGATCGCGATTATGAGATT
GAAGAGCGGATTCAAGAAAAATGTCAACCGCGCTACCACGCAGGTGATGA
TGAAGACGGATGTCTTGGGCAGCTCGACTGTGTTGGAGCCCATCTCTCGG
TTCTGTGCCTACTTCCCGGATATCAACGAGTGCATTAAGAAGCGCAACCA
CAAGTTACTCGATTACGATTCGATGCGCGCCAAGGTCAAGAAGCTGGTTG
AGAAGCCCGATAAGGATGCGACGAAACTGCCTCGGATGGAGCGCGAGACG
GAAATTGCCAAGCAAGCGTATGAGCAGTTGAACGAACAGCTCTTCACCGA
ACTTCCTCAGCTCATTGACCTGCGGGTACCCTACCTGGATCCTAGCTTCG
AGGCTCTGGTGAAGATTCAATTGCGGTTCTGCGCGGAGGCATATTCGCGC
ATGGCGCAGGTGCAACAGTACTTGGATGCGGAGACGAGGGATCAGTATGC
CCGGGGAGACCTGGACAACCGGGTGGAAGAAGTGTTGCAGGAGATTCGGG
ATCTGAGCATAGCAGGCACGGTCTGACTATGACTGCCTCGCAGATGCGGA
TTGCTGAGACTATTGATGCCTTCTATGGCGATGCCGGAACAAATGATGGC
GTGAGTCGGAGTTATAAGCAGGCTGTGGAGGATCTGGATGCGGAAACGAT
CAAGGCGCTGGACGGCCCGTACCGTCGGTACCGGACGATGGAAGCCGCCG
CAAACCGGTTACAGAAAGAGGCAAAGGGATACTTGGATTCGCTACGAGGA
CATGTGGAGCGCACAAGTGATCGCGATTATGAGATTGAAGAGCGGATTCA
AGAAAAATGTCAACCGCGCTACCACGCAGGTGATGATGAAGACGGATGTC
TTGGGCAGCTCGACTGTGTTGGAGCCCATCTCTCGGTTCTGTGCCTACTT
CCCGGATATCAACGAGTGCATTAAGAAGCGCAACCACAAGTTACTCGATT
ACGATTCGATGCGCGCCAAGGTCAAGAAGCTGGTTGAGAAGCCCGATAAG
GATGCGACGAAACTGCCTCGGATGGAGCGCGAGACGGAAATTGCCAAGCA
AGCGTATGAGCAGTTGAACGAACAGCTCTTCACCGAACTTCCTCAGCTCA
TTGACCTGCGGGTACCCTACCTGGATCCTAGCTTCGAGGCTCTGGTGAAG
ATTCAATTGCGGTTCTGCGCGGAGGCATATTCGCGCATGGCGCAGGTGCA
ACAGTACTTGGATGCGGAGACGAGGGATCAGTATGCCCGGGGAGACCTGG
ACAACCGGGTGGAAGAAGTGTTGCAGGAGATTCGGGATCTGAGCATAGCA
GGCACGGTCTGACTATGACTGCCTCGCAGATGCGGATTGCTGAGACTATT
GATGCCTTCTATGGCGATGCCGGAACAAATGATGGCGTGAGTCGGAGTTA
TAAGCAGGCTGTGGAGGATCTGGATGCGGAAACGATCAAGGCGCTGGACG
GCCCGTACCGTCGGTACCGGACGATGGAAGCCGCCGCAAACCGGTTACAG
AAAGAGGCAAAGGGATACTTGGATTCGCTACGAGGACATGTGGAGCGCAC
AAGTGATCGCGATTATGAGATTGAAGAGCGGATTCAAGAAAAATGTCAAC
CGCGCTACCACGCAGGTGATGATGAAGACGGATGTCTTGGGCAGCTCGAC
TGTGTTGGAGCCCATCTCTCGGTTCTGTGCCTACTTCCCGGATATCAACG
AGTGCATTAAGAAGCGCAACCACAAGTTACTCGATTACGATTCGATGCGC
GCCAAGGTCAAGAAGCTGGTTGAGAAGCCCGATAAGGATGCGACGAAACT
GCCTCGGATGGAGCGCGAGACGGAAATTGCCAAGCAAGCGTATGAGCAGT
TGAACGAACAGCTCTTCACCGAACTTCCTCAGCTCATTGACCTGCGGGTA
CCCTACCTGGATCCTAGCTTCGAGGCTCTGGTGAAGATTCAATTGCGGTT
CTGCGCGGAGGCATATTCGCGCATGGCGCAGGTGCAACAGTACTTGGATG
CGGAGACGAGGGATCAGTATGCCCGGGGAGACCTGGACAACCGGGTGGAA
GAAGTGTTGCAGGAGATTCGGGATCTGAGCATAGCAGGCACGGTCTGACT
ATGACTGCCTCGCAGATGCGGATTGCTGAGACTATTGATGCCTTCTATGG
CGATGCCGGAACAAATGATGGCGTGAGTCGGAGTTATAAGCAGGCTGTGG
AGGATCTGGATGCGGAAACGATCAAGGCGCTGGACGGCCCGTACCGTCGG
TACCGGACGATGGAAGCCGCCGCAAACCGGTTACAGAAAGAGGCAAAGGG
ATACTTGGATTCGCTACGAGGACATGTGGAGCGCACAAGTGATCGCGATT
ATGAGATTGAAGAGCGGATTCAAGAAAAATGTCAACCGCGCTACCACGCA
GGTGATGATGAAGACGGATGTCTTGGGCAGCTCGACTGTGTTGGAGCCCA
TCTCTCGGTTCTGTGCCTACTTCCCGGATATCAACGAGTGCATTAAGAAG
CGCAACCACAAGTTACTCGATTACGATTCGATGCGCGCCAAGGTCAAGAA
GCTGGTTGAGAAGCCCGATAAGGATGCGACGAAACTGCCTCGGATGGAGC
GCGAGACGGAAATTGCCAAGCAAGCGTATGAGCAGTTGAACGAACAGCTC
TTCACCGAACTTCCTCAGCTCATTGACCTGCGGGTACCCTACCTGGATCC
TAGCTTCGAGGCTCTGGTGAAGATTCAATTGCGGTTCTGCGCGGAGGCAT
ATTCGCGCATGGCGCAGGTGCAACAGTACTTGGATGCGGAGACGAGGGAT
CAGTATGCCCGGGGAGACCTGGACAACCGGGTGGAAGAAGTGTTGCAGGA
GATTCGGGATCTGAGCATAGCAGGCACGGTCTGACTATGACTGCCTCGCA
GATGCGGATTGCTGAGACTATTGATGCCTTCTATGGCGATGCCGGAACAA
ATGATGGCGTGAGTCGGAGTTATAAGCAGGCTGTGGAGGATCTGGATGCG
GAAACGATCAAGGCGCTGGACGGCCCGTACCGTCGGTACCGGACGATGGA
AGCCGCCGCAAACCGGTTACAGAAAGAGGCAAAGGGATACTTGGATTCGC
TACGAGGACATGTGGAGCGCACAAGTGATCGCGATTATGAGATTGAAGAG
CGGATTCAAGAAAAATGTCAACCGCGCTACCACGCAGGTGATGATGAAGA
CGGATGTCTTGGGCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007015actin filament organization
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HOB3ATCC10864_005138Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005138-T1ATCC10864_005138-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005138-T1.cdsATCC10864_005138-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005138-T1.exon6ATCC10864_005138-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_005138-T1.exon5ATCC10864_005138-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_005138-T1.exon4ATCC10864_005138-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005138-T1.exon3ATCC10864_005138-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005138-T1.exon2ATCC10864_005138-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005138-T1.exon1ATCC10864_005138-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR003005
InterProIPR027267
InterProIPR037429
PFAMPF03114
InterProIPR004148
Properties
Property NameValue
ProductBAR adaptor protein Hob3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:146699..147922 -
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