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ATCC10864_005143-T1, ATCC10864_005143-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005143-T1
Unique NameATCC10864_005143-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:163470..164191-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005143-T1 ID=ATCC10864_005143-T1|Name=ATCC10864_005143-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=722bp|location=Sequence derived from alignment at MCQH01000140:163470..164191- (Aspergillus niger ATCC 10864)
ATGGTTGTTTACTCCTTCTATATCTTCGATCGTCATGGTACCTCCCTCGC
ATCCATCTCTCCCTAGCCATTTCAATTGACGTTGCTAACCACGTCTCTCC
CTTTCTTCTAGCTGAATGCATCTATAATCGGCGCTGGCTGCCACGCCCAA
CCTCCATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACATCTGCT
CCGGGTCTCCCCGCAACATTAGGCCAAACTGCGCGCGCCACGGACGACGA
TGCCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGTTCGCA
AGCTAGGAGGCGAGGACGACAAGTAAGGACTCCACCCTACAGCGACGAGG
CAACTCAACTGGGAGGACAGTCATTGACCGCTCCGCCACGTTTATAGCTT
CGTTACCTACCGCACTAGCCAATACAAGCTCCATTACTACGAAACGCCGA
CCAATATCAAGTTCGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCGC
GTTGCTTTGCAGCAGATCTATATCAATCTATACGTCGAATACGGTACGCT
CTGGCTAGTTTAAACGATAACCTCCTCTACAGCTGTATGCTGACCACCTC
TACTTCTAGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGC
ATTGGAGTGAACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGGT
ATGTGCCATCAACGTCTCCTAG
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Coding sequence (CDS) from alignment at MCQH01000140:163470..164191-

>ATCC10864_005143-T1 ID=ATCC10864_005143-T1|Name=ATCC10864_005143-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2028bp|location=Sequence derived from alignment at MCQH01000140:163470..164191- (Aspergillus niger ATCC 10864)
TGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGCATTGGAGTG
AACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGGTATGTGCCAT
CAACGTCTCCTAGCTTCGTTACCTACCGCACTAGCCAATACAAGCTCCAT
TACTACGAAACGCCGACCAATATCAAGTTCGTTATGCTGACGGACCTCAA
GAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTATATCAATCTATACG
TCGAATACGCTGAATGCATCTATAATCGGCGCTGGCTGCCACGCCCAACC
TCCATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACATCTGCTCC
GGGTCTCCCCGCAACATTAGGCCAAACTGCGCGCGCCACGGACGACGATG
CCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGTTCGCAAG
CTAGGAGGCGAGGACGACAAATGGTTGTTTACTCCTTCTATATCTTCGAT
CGTCATGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAGGTGGCAT
TGGAGTGAACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTTGTGGTAT
GTGCCATCAACGTCTCCTAGCTTCGTTACCTACCGCACTAGCCAATACAA
GCTCCATTACTACGAAACGCCGACCAATATCAAGTTCGTTATGCTGACGG
ACCTCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTATATCAAT
CTATACGTCGAATACGCTGAATGCATCTATAATCGGCGCTGGCTGCCACG
CCCAACCTCCATGACAGGCAGCAAATCATCACGACCGACTTCCGAGACAT
CTGCTCCGGGTCTCCCCGCAACATTAGGCCAAACTGCGCGCGCCACGGAC
GACGATGCCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCAACATGGT
TCGCAAGCTAGGAGGCGAGGACGACAAATGGTTGTTTACTCCTTCTATAT
CTTCGATCGTCATGTGGTCAAGAACCCGTTATCTCCCGCCGAGCATCCAG
GTGGCATTGGAGTGAACAATGAGCTCTTTGAAGAGTCTCTGGAACAGTTT
GTGGTATGTGCCATCAACGTCTCCTAGCTTCGTTACCTACCGCACTAGCC
AATACAAGCTCCATTACTACGAAACGCCGACCAATATCAAGTTCGTTATG
CTGACGGACCTCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGCAGATCTA
TATCAATCTATACGTCGAATACGCTGAATGCATCTATAATCGGCGCTGGC
TGCCACGCCCAACCTCCATGACAGGCAGCAAATCATCACGACCGACTTCC
GAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGCCAAACTGCGCGCGC
CACGGACGACGATGCCAAGCTCATCTTCGGTACTGTTTTCTCCCTGCGCA
ACATGGTTCGCAAGCTAGGAGGCGAGGACGACAAATGGTTGTTTACTCCT
TCTATATCTTCGATCGTCATGTGGTCAAGAACCCGTTATCTCCCGCCGAG
CATCCAGGTGGCATTGGAGTGAACAATGAGCTCTTTGAAGAGTCTCTGGA
ACAGTTTGTGGTATGTGCCATCAACGTCTCCTAGCTTCGTTACCTACCGC
ACTAGCCAATACAAGCTCCATTACTACGAAACGCCGACCAATATCAAGTT
CGTTATGCTGACGGACCTCAAGAGTCCAAGCATGCGCGTTGCTTTGCAGC
AGATCTATATCAATCTATACGTCGAATACGCTGAATGCATCTATAATCGG
CGCTGGCTGCCACGCCCAACCTCCATGACAGGCAGCAAATCATCACGACC
GACTTCCGAGACATCTGCTCCGGGTCTCCCCGCAACATTAGGCCAAACTG
CGCGCGCCACGGACGACGATGCCAAGCTCATCTTCGGTACTGTTTTCTCC
CTGCGCAACATGGTTCGCAAGCTAGGAGGCGAGGACGACAAATGGTTGTT
TACTCCTTCTATATCTTCGATCGTCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0030008TRAPP complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005143ATCC10864_005143Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005143-T1ATCC10864_005143-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005143-T1.cdsATCC10864_005143-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005143-T1.exon4ATCC10864_005143-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005143-T1.exon3ATCC10864_005143-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005143-T1.exon2ATCC10864_005143-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005143-T1.exon1ATCC10864_005143-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR011012
InterProIPR007233
PFAMPF04099
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:163470..164191 -
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