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ATCC10864_005152-T1, ATCC10864_005152-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005152-T1
Unique NameATCC10864_005152-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:200834..201629+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005152-T1 ID=ATCC10864_005152-T1|Name=ATCC10864_005152-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=796bp|location=Sequence derived from alignment at MCQH01000140:200834..201629+ (Aspergillus niger ATCC 10864)
ATGGCTGACACACCTGCACCTCACTCCGGTCCCATGTTGACCTTCATCAG
TGGCGACGGCGTGCACATTGAGTGTGGTAAGTGCACGCGTTTCAATAAGC
TCAGCAGACGCGCTCAGTGTCTGTGTCACGATGAGACCATATATGCTAAC
ATGTGTGTGAAAATACAGAACGCGATGTTGCCGAGCGCTCCCTTCTCATC
AAGAACATGCTGGAAGATCTGGGTGGCGCCAACGAGGAGATCCCGATCCC
TAATGTGAGTTATCCGTTCGAAGTAAAATGGCCATTGGTGACCATAGCTA
ACCACACCCGCAACACAGGTCAACGAAGCTGTCTTGAAGAAGGTCATCGA
ATGGTGCAGACATCACAAGAACGACCCCCCCAGCACTGGCGAGGAGGATG
ACTCCCGCCGCAAGACCACCGACATCGACGAGTGGGATCAGAAATTTACC
CAGGTCGATCAAGAAATGTTGTTCGAGATCATTCTGGTACGCGTTACGAA
CTATGATCTACAAAAGCCCCTCAGCTAACTTGGCGCTTAACTTGATAGGC
CGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCG
TTGCGAACATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTC
AACATCCAGAACGATTTCACCCCCGAGGAGGAGGATCAGATCCGCCGTGA
GAACGAGTGGGCCGAGGAGTAAGTTCCTTACAAACCCATCCCCCGCTATC
TTACCACCTGATCGTATGCTAACATTGTACTTGCTATAGTCGCTAA
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Coding sequence (CDS) from alignment at MCQH01000140:200834..201629+

>ATCC10864_005152-T1 ID=ATCC10864_005152-T1|Name=ATCC10864_005152-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2535bp|location=Sequence derived from alignment at MCQH01000140:200834..201629+ (Aspergillus niger ATCC 10864)
ATGGCTGACACACCTGCACCTCACTCCGGTCCCATGTTGACCTTCATCAG
TGGCGACGGCGTGCACATTGAGTGTGAACGCGATGTTGCCGAGCGCTCCC
TTCTCATCAAGAACATGCTGGAAGATCTGGGTGGCGCCAACGAGGAGATC
CCGATCCCTAATGTCAACGAAGCTGTCTTGAAGAAGGTCATCGAATGGTG
CAGACATCACAAGAACGACCCCCCCAGCACTGGCGAGGAGGATGACTCCC
GCCGCAAGACCACCGACATCGACGAGTGGGATCAGAAATTTACCCAGGTC
GATCAAGAAATGTTGTTCGAGATCATTCTGGCCGCAAACTACCTCGACAT
TAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGCGAACATGATCAAGG
GCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAACGATTTC
ACCCCCGAGGAGGAGGATCAGATCCGCCGTGAGAACGAGTGGGCCGAGGA
TCGCTAAATGGCTGACACACCTGCACCTCACTCCGGTCCCATGTTGACCT
TCATCAGTGGCGACGGCGTGCACATTGAGTGTGAACGCGATGTTGCCGAG
CGCTCCCTTCTCATCAAGAACATGCTGGAAGATCTGGGTGGCGCCAACGA
GGAGATCCCGATCCCTAATGTCAACGAAGCTGTCTTGAAGAAGGTCATCG
AATGGTGCAGACATCACAAGAACGACCCCCCCAGCACTGGCGAGGAGGAT
GACTCCCGCCGCAAGACCACCGACATCGACGAGTGGGATCAGAAATTTAC
CCAGGTCGATCAAGAAATGTTGTTCGAGATCATTCTGGCCGCAAACTACC
TCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGCGAACATG
ATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAA
CGATTTCACCCCCGAGGAGGAGGATCAGATCCGCCGTGAGAACGAGTGGG
CCGAGGATCGCTAAATGGCTGACACACCTGCACCTCACTCCGGTCCCATG
TTGACCTTCATCAGTGGCGACGGCGTGCACATTGAGTGTGAACGCGATGT
TGCCGAGCGCTCCCTTCTCATCAAGAACATGCTGGAAGATCTGGGTGGCG
CCAACGAGGAGATCCCGATCCCTAATGTCAACGAAGCTGTCTTGAAGAAG
GTCATCGAATGGTGCAGACATCACAAGAACGACCCCCCCAGCACTGGCGA
GGAGGATGACTCCCGCCGCAAGACCACCGACATCGACGAGTGGGATCAGA
AATTTACCCAGGTCGATCAAGAAATGTTGTTCGAGATCATTCTGGCCGCA
AACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGC
GAACATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACA
TCCAGAACGATTTCACCCCCGAGGAGGAGGATCAGATCCGCCGTGAGAAC
GAGTGGGCCGAGGATCGCTAAATGGCTGACACACCTGCACCTCACTCCGG
TCCCATGTTGACCTTCATCAGTGGCGACGGCGTGCACATTGAGTGTGAAC
GCGATGTTGCCGAGCGCTCCCTTCTCATCAAGAACATGCTGGAAGATCTG
GGTGGCGCCAACGAGGAGATCCCGATCCCTAATGTCAACGAAGCTGTCTT
GAAGAAGGTCATCGAATGGTGCAGACATCACAAGAACGACCCCCCCAGCA
CTGGCGAGGAGGATGACTCCCGCCGCAAGACCACCGACATCGACGAGTGG
GATCAGAAATTTACCCAGGTCGATCAAGAAATGTTGTTCGAGATCATTCT
GGCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAA
CCGTTGCGAACATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACC
TTCAACATCCAGAACGATTTCACCCCCGAGGAGGAGGATCAGATCCGCCG
TGAGAACGAGTGGGCCGAGGATCGCTAAATGGCTGACACACCTGCACCTC
ACTCCGGTCCCATGTTGACCTTCATCAGTGGCGACGGCGTGCACATTGAG
TGTGAACGCGATGTTGCCGAGCGCTCCCTTCTCATCAAGAACATGCTGGA
AGATCTGGGTGGCGCCAACGAGGAGATCCCGATCCCTAATGTCAACGAAG
CTGTCTTGAAGAAGGTCATCGAATGGTGCAGACATCACAAGAACGACCCC
CCCAGCACTGGCGAGGAGGATGACTCCCGCCGCAAGACCACCGACATCGA
CGAGTGGGATCAGAAATTTACCCAGGTCGATCAAGAAATGTTGTTCGAGA
TCATTCTGGCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGA
TGCAAAACCGTTGCGAACATGATCAAGGGCAAGTCTCCGGAAGAGATCCG
CAAGACCTTCAACATCCAGAACGATTTCACCCCCGAGGAGGAGGATCAGA
TCCGCCGTGAGAACGAGTGGGCCGAGGATCGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005152ATCC10864_005152Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005152-T1ATCC10864_005152-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005152-T1.exon1ATCC10864_005152-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005152-T1.exon2ATCC10864_005152-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005152-T1.exon3ATCC10864_005152-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005152-T1.exon4ATCC10864_005152-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005152-T1.exon5ATCC10864_005152-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005152-T1.cdsATCC10864_005152-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR016072
InterProIPR011333
PFAMPF01466
InterProIPR016897
InterProIPR016073
PFAMPF03931
InterProIPR036296
InterProIPR001232
Properties
Property NameValue
NoteBUSCO:EOG09264ZWF
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:200834..201629 +
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