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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000140:224525..226314- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005159-T1 ID=ATCC10864_005159-T1|Name=ATCC10864_005159-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1790bp|location=Sequence derived from alignment at MCQH01000140:224525..226314- (Aspergillus niger ATCC 10864)
ATGTCTTCAACCACGTCTTCATCAAGATCAGACCTTGAAAAGGTCCCCGT
ACCACAGGTCACCCCTAGAGACAGTGACTCCGATAAGGGATCCCTCTCTC
CGGAGCCTTCGACCCTCGAGGCTCAGTCATCCGAGAAGCCACCGCATCAT
ATCTTCACACGGTCTCGCAAGCTGCAAATGGTTTGCATCGTCTCCCTCGC
TGCCATATTTTCTCCGCTTTCGTCGAACATTTACTTCCCTGCCCTGGATG
ATGTCTCGAAAGTAAGTACTTCGGCTCCATACCTTCCTGGACCCGACATG
TTGACTGTACCATGATAGTCCCTCAACATCAGCATGTCGCTCGCAACACT
CACCATCACGGTGTACATGATCGTCCAAGGCCTCGCTCCCAGCTTCTGGG
GTTCCATGTCAGACGCCACAGGTAGACGGCCTGTCTTTATTGGAACATTC
ATTGTTTACCTCGTAGCCAATATTGCTCTGGCCGAATCCAAGAACTATGG
TGAGCTCATGGCCTTCCGAGCCTTGCAGGCTGCTGGTAGCGCAGCCACCA
TCTCAATCGGTAAGAGCGATCTCACAGCCTAGCATAGCATCTCGCTAACC
AAGATCAGGAGCTGGAGTGATTGGTGATATCACAAACTCGGAAGAAAGAG
GTAGCTTGGTGGGTATCTTCGGTGGAGGTTAGAAAACATCCCTTTGCTTG
CTGGATGGTGAAGCTGACAGAACCAAGTTCGCATGCTTGGACAGGGAATC
GGGCCGGTTTTCGGCGGCATTTTCACCCAGTATCTCGGATATCGATCTAT
CTTTTGGTTCCTCACGATTGCTGGAGGCGTGAGTCTCCTGTCCATTCTGG
TGCTTCTTCCGGAGACATTGAGACCAATTGCTGGAAATGGAACTGTGAAG
CTCAATGGCATTCATAAGCCCTTCATCTACACGATCACCGGCCAGACGGG
GGTTGTCGAGGGAGCGCAACCGGAAGCGAAAAAGACCAAAACCAGCTGGA
AGTCTGTTTTTGCTCCTTTGACATTCCTCGTCGAAAAGGACGTTTTCATC
ACCCTGTTCTTTGGAAGTATCGTGTACACAGTGTGGAGCATGGTGACATC
CAGTACCACCGACCTCTTCAGCGAAGTGTACGGCCTGTCATCCCTGGACA
TTGGACTCACTTTCCTAGGCAATGGTAAGTTTTATGATCTCCTCCGACAC
TTTTGGCCTGAATGACCGCTCATGCACTGGTAGGCTTTGGATGTATGTCT
GGCTCTTATCTGGTCGGCTACCTTATGGATTACAACCACCGTCTTACCGA
ACGCGAATATTGCGAGAAACACGGTTATCCGGCAGGCACACGTGTCAATC
TGAAATCACACCCCGACTTCCCCATTGAGGTCGCCCGGATGCGCAATACC
TGGTGGGTGATTGCGATCTTCATCGTGACAGTTGCTTTGTACGGCGTGTC
TTTGCGGACACATCTGGCGGTGCCTATCATTCTGCAGTACTTCATTGCGT
TCTGCTCAACAGGACTCTTCACCATCAACAGCGCCCTGGTCATCGATCTT
TACCCAGGTGCTAGCGCCAGTGCGACAGCAGTGAACAATCTGATGCGGTG
CCTGCTTGGAGCTGGCGGTGTGGCTATCGTGCAACCTATCCTGGACGCCT
TGAAGCCGGATTATACTTTCCTCTTGCTTGCCGGCATCACCCTTGTGATG
ACTCCGTTGCTGTACGTCGAAGATCGATGGGGTCCTGGCTGGCGACATGC
CCGCGAAAGGAGACTCAAGGCCAAAGCCAACGGCAACTAG back to topCoding sequence (CDS) from alignment at MCQH01000140:224525..226314- >ATCC10864_005159-T1 ID=ATCC10864_005159-T1|Name=ATCC10864_005159-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7875bp|location=Sequence derived from alignment at MCQH01000140:224525..226314- (Aspergillus niger ATCC 10864)
GCTTTGGATGTATGTCTGGCTCTTATCTGGTCGGCTACCTTATGGATTAC
AACCACCGTCTTACCGAACGCGAATATTGCGAGAAACACGGTTATCCGGC
AGGCACACGTGTCAATCTGAAATCACACCCCGACTTCCCCATTGAGGTCG
CCCGGATGCGCAATACCTGGTGGGTGATTGCGATCTTCATCGTGACAGTT
GCTTTGTACGGCGTGTCTTTGCGGACACATCTGGCGGTGCCTATCATTCT
GCAGTACTTCATTGCGTTCTGCTCAACAGGACTCTTCACCATCAACAGCG
CCCTGGTCATCGATCTTTACCCAGGTGCTAGCGCCAGTGCGACAGCAGTG
AACAATCTGATGCGGTGCCTGCTTGGAGCTGGCGGTGTGGCTATCGTGCA
ACCTATCCTGGACGCCTTGAAGCCGGATTATACTTTCCTCTTGCTTGCCG
GCATCACCCTTGTGATGACTCCGTTGCTGTACGTCGAAGATCGATGGGGT
CCTGGCTGGCGACATGCCCGCGAAAGGAGACTCAAGGCCAAAGCCAACGG
CAACTAGTTCGCATGCTTGGACAGGGAATCGGGCCGGTTTTCGGCGGCAT
TTTCACCCAGTATCTCGGATATCGATCTATCTTTTGGTTCCTCACGATTG
CTGGAGGCGTGAGTCTCCTGTCCATTCTGGTGCTTCTTCCGGAGACATTG
AGACCAATTGCTGGAAATGGAACTGTGAAGCTCAATGGCATTCATAAGCC
CTTCATCTACACGATCACCGGCCAGACGGGGGTTGTCGAGGGAGCGCAAC
CGGAAGCGAAAAAGACCAAAACCAGCTGGAAGTCTGTTTTTGCTCCTTTG
ACATTCCTCGTCGAAAAGGACGTTTTCATCACCCTGTTCTTTGGAAGTAT
CGTGTACACAGTGTGGAGCATGGTGACATCCAGTACCACCGACCTCTTCA
GCGAAGTGTACGGCCTGTCATCCCTGGACATTGGACTCACTTTCCTAGGC
AATGGAGCTGGAGTGATTGGTGATATCACAAACTCGGAAGAAAGAGGTAG
CTTGGTGGGTATCTTCGGTGGAGTCCCTCAACATCAGCATGTCGCTCGCA
ACACTCACCATCACGGTGTACATGATCGTCCAAGGCCTCGCTCCCAGCTT
CTGGGGTTCCATGTCAGACGCCACAGGTAGACGGCCTGTCTTTATTGGAA
CATTCATTGTTTACCTCGTAGCCAATATTGCTCTGGCCGAATCCAAGAAC
TATGGTGAGCTCATGGCCTTCCGAGCCTTGCAGGCTGCTGGTAGCGCAGC
CACCATCTCAATCGATGTCTTCAACCACGTCTTCATCAAGATCAGACCTT
GAAAAGGTCCCCGTACCACAGGTCACCCCTAGAGACAGTGACTCCGATAA
GGGATCCCTCTCTCCGGAGCCTTCGACCCTCGAGGCTCAGTCATCCGAGA
AGCCACCGCATCATATCTTCACACGGTCTCGCAAGCTGCAAATGGTTTGC
ATCGTCTCCCTCGCTGCCATATTTTCTCCGCTTTCGTCGAACATTTACTT
CCCTGCCCTGGATGATGTCTCGAAAGCTTTGGATGTATGTCTGGCTCTTA
TCTGGTCGGCTACCTTATGGATTACAACCACCGTCTTACCGAACGCGAAT
ATTGCGAGAAACACGGTTATCCGGCAGGCACACGTGTCAATCTGAAATCA
CACCCCGACTTCCCCATTGAGGTCGCCCGGATGCGCAATACCTGGTGGGT
GATTGCGATCTTCATCGTGACAGTTGCTTTGTACGGCGTGTCTTTGCGGA
CACATCTGGCGGTGCCTATCATTCTGCAGTACTTCATTGCGTTCTGCTCA
ACAGGACTCTTCACCATCAACAGCGCCCTGGTCATCGATCTTTACCCAGG
TGCTAGCGCCAGTGCGACAGCAGTGAACAATCTGATGCGGTGCCTGCTTG
GAGCTGGCGGTGTGGCTATCGTGCAACCTATCCTGGACGCCTTGAAGCCG
GATTATACTTTCCTCTTGCTTGCCGGCATCACCCTTGTGATGACTCCGTT
GCTGTACGTCGAAGATCGATGGGGTCCTGGCTGGCGACATGCCCGCGAAA
GGAGACTCAAGGCCAAAGCCAACGGCAACTAGTTCGCATGCTTGGACAGG
GAATCGGGCCGGTTTTCGGCGGCATTTTCACCCAGTATCTCGGATATCGA
TCTATCTTTTGGTTCCTCACGATTGCTGGAGGCGTGAGTCTCCTGTCCAT
TCTGGTGCTTCTTCCGGAGACATTGAGACCAATTGCTGGAAATGGAACTG
TGAAGCTCAATGGCATTCATAAGCCCTTCATCTACACGATCACCGGCCAG
ACGGGGGTTGTCGAGGGAGCGCAACCGGAAGCGAAAAAGACCAAAACCAG
CTGGAAGTCTGTTTTTGCTCCTTTGACATTCCTCGTCGAAAAGGACGTTT
TCATCACCCTGTTCTTTGGAAGTATCGTGTACACAGTGTGGAGCATGGTG
ACATCCAGTACCACCGACCTCTTCAGCGAAGTGTACGGCCTGTCATCCCT
GGACATTGGACTCACTTTCCTAGGCAATGGAGCTGGAGTGATTGGTGATA
TCACAAACTCGGAAGAAAGAGGTAGCTTGGTGGGTATCTTCGGTGGAGTC
CCTCAACATCAGCATGTCGCTCGCAACACTCACCATCACGGTGTACATGA
TCGTCCAAGGCCTCGCTCCCAGCTTCTGGGGTTCCATGTCAGACGCCACA
GGTAGACGGCCTGTCTTTATTGGAACATTCATTGTTTACCTCGTAGCCAA
TATTGCTCTGGCCGAATCCAAGAACTATGGTGAGCTCATGGCCTTCCGAG
CCTTGCAGGCTGCTGGTAGCGCAGCCACCATCTCAATCGATGTCTTCAAC
CACGTCTTCATCAAGATCAGACCTTGAAAAGGTCCCCGTACCACAGGTCA
CCCCTAGAGACAGTGACTCCGATAAGGGATCCCTCTCTCCGGAGCCTTCG
ACCCTCGAGGCTCAGTCATCCGAGAAGCCACCGCATCATATCTTCACACG
GTCTCGCAAGCTGCAAATGGTTTGCATCGTCTCCCTCGCTGCCATATTTT
CTCCGCTTTCGTCGAACATTTACTTCCCTGCCCTGGATGATGTCTCGAAA
GCTTTGGATGTATGTCTGGCTCTTATCTGGTCGGCTACCTTATGGATTAC
AACCACCGTCTTACCGAACGCGAATATTGCGAGAAACACGGTTATCCGGC
AGGCACACGTGTCAATCTGAAATCACACCCCGACTTCCCCATTGAGGTCG
CCCGGATGCGCAATACCTGGTGGGTGATTGCGATCTTCATCGTGACAGTT
GCTTTGTACGGCGTGTCTTTGCGGACACATCTGGCGGTGCCTATCATTCT
GCAGTACTTCATTGCGTTCTGCTCAACAGGACTCTTCACCATCAACAGCG
CCCTGGTCATCGATCTTTACCCAGGTGCTAGCGCCAGTGCGACAGCAGTG
AACAATCTGATGCGGTGCCTGCTTGGAGCTGGCGGTGTGGCTATCGTGCA
ACCTATCCTGGACGCCTTGAAGCCGGATTATACTTTCCTCTTGCTTGCCG
GCATCACCCTTGTGATGACTCCGTTGCTGTACGTCGAAGATCGATGGGGT
CCTGGCTGGCGACATGCCCGCGAAAGGAGACTCAAGGCCAAAGCCAACGG
CAACTAGTTCGCATGCTTGGACAGGGAATCGGGCCGGTTTTCGGCGGCAT
TTTCACCCAGTATCTCGGATATCGATCTATCTTTTGGTTCCTCACGATTG
CTGGAGGCGTGAGTCTCCTGTCCATTCTGGTGCTTCTTCCGGAGACATTG
AGACCAATTGCTGGAAATGGAACTGTGAAGCTCAATGGCATTCATAAGCC
CTTCATCTACACGATCACCGGCCAGACGGGGGTTGTCGAGGGAGCGCAAC
CGGAAGCGAAAAAGACCAAAACCAGCTGGAAGTCTGTTTTTGCTCCTTTG
ACATTCCTCGTCGAAAAGGACGTTTTCATCACCCTGTTCTTTGGAAGTAT
CGTGTACACAGTGTGGAGCATGGTGACATCCAGTACCACCGACCTCTTCA
GCGAAGTGTACGGCCTGTCATCCCTGGACATTGGACTCACTTTCCTAGGC
AATGGAGCTGGAGTGATTGGTGATATCACAAACTCGGAAGAAAGAGGTAG
CTTGGTGGGTATCTTCGGTGGAGTCCCTCAACATCAGCATGTCGCTCGCA
ACACTCACCATCACGGTGTACATGATCGTCCAAGGCCTCGCTCCCAGCTT
CTGGGGTTCCATGTCAGACGCCACAGGTAGACGGCCTGTCTTTATTGGAA
CATTCATTGTTTACCTCGTAGCCAATATTGCTCTGGCCGAATCCAAGAAC
TATGGTGAGCTCATGGCCTTCCGAGCCTTGCAGGCTGCTGGTAGCGCAGC
CACCATCTCAATCGATGTCTTCAACCACGTCTTCATCAAGATCAGACCTT
GAAAAGGTCCCCGTACCACAGGTCACCCCTAGAGACAGTGACTCCGATAA
GGGATCCCTCTCTCCGGAGCCTTCGACCCTCGAGGCTCAGTCATCCGAGA
AGCCACCGCATCATATCTTCACACGGTCTCGCAAGCTGCAAATGGTTTGC
ATCGTCTCCCTCGCTGCCATATTTTCTCCGCTTTCGTCGAACATTTACTT
CCCTGCCCTGGATGATGTCTCGAAAGCTTTGGATGTATGTCTGGCTCTTA
TCTGGTCGGCTACCTTATGGATTACAACCACCGTCTTACCGAACGCGAAT
ATTGCGAGAAACACGGTTATCCGGCAGGCACACGTGTCAATCTGAAATCA
CACCCCGACTTCCCCATTGAGGTCGCCCGGATGCGCAATACCTGGTGGGT
GATTGCGATCTTCATCGTGACAGTTGCTTTGTACGGCGTGTCTTTGCGGA
CACATCTGGCGGTGCCTATCATTCTGCAGTACTTCATTGCGTTCTGCTCA
ACAGGACTCTTCACCATCAACAGCGCCCTGGTCATCGATCTTTACCCAGG
TGCTAGCGCCAGTGCGACAGCAGTGAACAATCTGATGCGGTGCCTGCTTG
GAGCTGGCGGTGTGGCTATCGTGCAACCTATCCTGGACGCCTTGAAGCCG
GATTATACTTTCCTCTTGCTTGCCGGCATCACCCTTGTGATGACTCCGTT
GCTGTACGTCGAAGATCGATGGGGTCCTGGCTGGCGACATGCCCGCGAAA
GGAGACTCAAGGCCAAAGCCAACGGCAACTAGTTCGCATGCTTGGACAGG
GAATCGGGCCGGTTTTCGGCGGCATTTTCACCCAGTATCTCGGATATCGA
TCTATCTTTTGGTTCCTCACGATTGCTGGAGGCGTGAGTCTCCTGTCCAT
TCTGGTGCTTCTTCCGGAGACATTGAGACCAATTGCTGGAAATGGAACTG
TGAAGCTCAATGGCATTCATAAGCCCTTCATCTACACGATCACCGGCCAG
ACGGGGGTTGTCGAGGGAGCGCAACCGGAAGCGAAAAAGACCAAAACCAG
CTGGAAGTCTGTTTTTGCTCCTTTGACATTCCTCGTCGAAAAGGACGTTT
TCATCACCCTGTTCTTTGGAAGTATCGTGTACACAGTGTGGAGCATGGTG
ACATCCAGTACCACCGACCTCTTCAGCGAAGTGTACGGCCTGTCATCCCT
GGACATTGGACTCACTTTCCTAGGCAATGGAGCTGGAGTGATTGGTGATA
TCACAAACTCGGAAGAAAGAGGTAGCTTGGTGGGTATCTTCGGTGGAGTC
CCTCAACATCAGCATGTCGCTCGCAACACTCACCATCACGGTGTACATGA
TCGTCCAAGGCCTCGCTCCCAGCTTCTGGGGTTCCATGTCAGACGCCACA
GGTAGACGGCCTGTCTTTATTGGAACATTCATTGTTTACCTCGTAGCCAA
TATTGCTCTGGCCGAATCCAAGAACTATGGTGAGCTCATGGCCTTCCGAG
CCTTGCAGGCTGCTGGTAGCGCAGCCACCATCTCAATCGATGTCTTCAAC
CACGTCTTCATCAAGATCAGACCTTGAAAAGGTCCCCGTACCACAGGTCA
CCCCTAGAGACAGTGACTCCGATAAGGGATCCCTCTCTCCGGAGCCTTCG
ACCCTCGAGGCTCAGTCATCCGAGAAGCCACCGCATCATATCTTCACACG
GTCTCGCAAGCTGCAAATGGTTTGCATCGTCTCCCTCGCTGCCATATTTT
CTCCGCTTTCGTCGAACATTTACTTCCCTGCCCTGGATGATGTCTCGAAA
GCTTTGGATGTATGTCTGGCTCTTATCTGGTCGGCTACCTTATGGATTAC
AACCACCGTCTTACCGAACGCGAATATTGCGAGAAACACGGTTATCCGGC
AGGCACACGTGTCAATCTGAAATCACACCCCGACTTCCCCATTGAGGTCG
CCCGGATGCGCAATACCTGGTGGGTGATTGCGATCTTCATCGTGACAGTT
GCTTTGTACGGCGTGTCTTTGCGGACACATCTGGCGGTGCCTATCATTCT
GCAGTACTTCATTGCGTTCTGCTCAACAGGACTCTTCACCATCAACAGCG
CCCTGGTCATCGATCTTTACCCAGGTGCTAGCGCCAGTGCGACAGCAGTG
AACAATCTGATGCGGTGCCTGCTTGGAGCTGGCGGTGTGGCTATCGTGCA
ACCTATCCTGGACGCCTTGAAGCCGGATTATACTTTCCTCTTGCTTGCCG
GCATCACCCTTGTGATGACTCCGTTGCTGTACGTCGAAGATCGATGGGGT
CCTGGCTGGCGACATGCCCGCGAAAGGAGACTCAAGGCCAAAGCCAACGG
CAACTAGTTCGCATGCTTGGACAGGGAATCGGGCCGGTTTTCGGCGGCAT
TTTCACCCAGTATCTCGGATATCGATCTATCTTTTGGTTCCTCACGATTG
CTGGAGGCGTGAGTCTCCTGTCCATTCTGGTGCTTCTTCCGGAGACATTG
AGACCAATTGCTGGAAATGGAACTGTGAAGCTCAATGGCATTCATAAGCC
CTTCATCTACACGATCACCGGCCAGACGGGGGTTGTCGAGGGAGCGCAAC
CGGAAGCGAAAAAGACCAAAACCAGCTGGAAGTCTGTTTTTGCTCCTTTG
ACATTCCTCGTCGAAAAGGACGTTTTCATCACCCTGTTCTTTGGAAGTAT
CGTGTACACAGTGTGGAGCATGGTGACATCCAGTACCACCGACCTCTTCA
GCGAAGTGTACGGCCTGTCATCCCTGGACATTGGACTCACTTTCCTAGGC
AATGGAGCTGGAGTGATTGGTGATATCACAAACTCGGAAGAAAGAGGTAG
CTTGGTGGGTATCTTCGGTGGAGTCCCTCAACATCAGCATGTCGCTCGCA
ACACTCACCATCACGGTGTACATGATCGTCCAAGGCCTCGCTCCCAGCTT
CTGGGGTTCCATGTCAGACGCCACAGGTAGACGGCCTGTCTTTATTGGAA
CATTCATTGTTTACCTCGTAGCCAATATTGCTCTGGCCGAATCCAAGAAC
TATGGTGAGCTCATGGCCTTCCGAGCCTTGCAGGCTGCTGGTAGCGCAGC
CACCATCTCAATCGATGTCTTCAACCACGTCTTCATCAAGATCAGACCTT
GAAAAGGTCCCCGTACCACAGGTCACCCCTAGAGACAGTGACTCCGATAA
GGGATCCCTCTCTCCGGAGCCTTCGACCCTCGAGGCTCAGTCATCCGAGA
AGCCACCGCATCATATCTTCACACGGTCTCGCAAGCTGCAAATGGTTTGC
ATCGTCTCCCTCGCTGCCATATTTTCTCCGCTTTCGTCGAACATTTACTT
CCCTGCCCTGGATGATGTCTCGAAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR036259 |
| InterPro | IPR011701 |
| PFAM | PF07690 |
| InterPro | IPR020846 |
Properties
| Property Name | Value |
|---|
| Product | Nuclear aminoacylation-dependent tRNA export pathway component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000140 | supercontig | MCQH01000140:224525..226314 - |
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