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ATCC10864_005177-T1, ATCC10864_005177-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005177-T1
Unique NameATCC10864_005177-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:288788..289919-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005177-T1 ID=ATCC10864_005177-T1|Name=ATCC10864_005177-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1132bp|location=Sequence derived from alignment at MCQH01000140:288788..289919- (Aspergillus niger ATCC 10864)
ATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAA
GGAGGTAAGTCGTGTGTGCGTTTTCTGGTTTTGTGTCCTATTCCTCCTCC
CTGTCTCCCCCCAATCGGTTTGCGAAAGGGGTTTCCTTTCTACCTGCATT
GTATCTGCTCGTTTATTCCTGTCTTACAATGTTTATTCATCACGGATTGG
AATCGTCGGAGAGCTGGAGGATGGGATGAAGTCGTGTTGTTGTTCTCCGA
TTTCTGCCTACTTGCATATTTCTCAGCCGCCAGTTTCGAAGCTAAACTAA
CCATCTCCTCTTCACACTTTAGCTCTCCAAGTACCCTGTCCTCAACAACT
TGGAGCGCCAGACCTCCGTCCCCAAGGTCTACGTGATCCTGGGCCTGGTC
GGCGTCTACTTCTTCTTGGTCTTCTTCAACATCGCCGGTGAATTCCTCGT
CAACCTCGCTGGTTTCCTCATCCCTGGTTACTACTCCCTGAACGCTCTGT
TCACCGCCGGAAAGGCCGACGACACACAGGTATGCTCCATCTCTTTATTC
CCTACTGTTTTCTTAGATGATAATTGTGCTGATGATCGTGACCCTGCGTT
TAGTGGTTGACGGTATGTTTCTCGTGATCCCCGTTATCGCGACATGACTC
GGGCGTTTCATACGCCTAGGTTATCTTTCTGCACGTGACGACGTGCGCTC
GTCAGCTAGCGGTTATACTGATTGGCATGTGATTCTTCTAGTACTGGGTT
GTTTACGCCTTCTTCACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTG
GTTCCGTAAGTATTCGCAACGTTTGATGTGATTCCTACAGTGGAAAGTAC
ATAAACTGATCGCGACGCTTCAACACAGCCTTCTACTATATCTTCAAGTT
CGCCCTTGTCCTCTGGATGTCTCTTCCCCAGACCAAGTAAGCTATCCACT
TCCCGCAGCTCCGAAACCCATTATTATTATCATCACCAGAACTCCGACTG
ACCCTCTTCTCCAGCGGTGCTCAAGTTGTCTTCCACTCCTTCATCCAGCC
CGTGCTCGGCCGCTTCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCG
CCCAGGCCGAGGCTGCTGCTAAGGACCAGTAA
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Coding sequence (CDS) from alignment at MCQH01000140:288788..289919-

>ATCC10864_005177-T1 ID=ATCC10864_005177-T1|Name=ATCC10864_005177-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2505bp|location=Sequence derived from alignment at MCQH01000140:288788..289919- (Aspergillus niger ATCC 10864)
CGGTGCTCAAGTTGTCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCGCT
TCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGGCT
GCTGCTAAGGACCAGTAACCTTCTACTATATCTTCAAGTTCGCCCTTGTC
CTCTGGATGTCTCTTCCCCAGACCAATACTGGGTTGTTTACGCCTTCTTC
ACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTGGTTCCCTCTCCAAGT
ACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCGTCCCCAAGGTCTAC
GTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTGGTCTTCTTCAACAT
CGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCTCATCCCTGGTTACT
ACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCGACGACACACAGATG
GCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAAGGA
GCGGTGCTCAAGTTGTCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCGC
TTCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGGC
TGCTGCTAAGGACCAGTAACCTTCTACTATATCTTCAAGTTCGCCCTTGT
CCTCTGGATGTCTCTTCCCCAGACCAATACTGGGTTGTTTACGCCTTCTT
CACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTGGTTCCCTCTCCAAG
TACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCGTCCCCAAGGTCTA
CGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTGGTCTTCTTCAACA
TCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCTCATCCCTGGTTAC
TACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCGACGACACACAGAT
GGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAAGG
AGCGGTGCTCAAGTTGTCTTCCACTCCTTCATCCAGCCCGTGCTCGGCCG
CTTCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCGCCCAGGCCGAGG
CTGCTGCTAAGGACCAGTAACCTTCTACTATATCTTCAAGTTCGCCCTTG
TCCTCTGGATGTCTCTTCCCCAGACCAATACTGGGTTGTTTACGCCTTCT
TCACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTGGTTCCCTCTCCAA
GTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCGTCCCCAAGGTCT
ACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTGGTCTTCTTCAAC
ATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCTCATCCCTGGTTA
CTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCGACGACACACAGA
TGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAAG
GAGCGGTGCTCAAGTTGTCTTCCACTCCTTCATCCAGCCCGTGCTCGGCC
GCTTCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCGCCCAGGCCGAG
GCTGCTGCTAAGGACCAGTAACCTTCTACTATATCTTCAAGTTCGCCCTT
GTCCTCTGGATGTCTCTTCCCCAGACCAATACTGGGTTGTTTACGCCTTC
TTCACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTGGTTCCCTCTCCA
AGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCGTCCCCAAGGTC
TACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTGGTCTTCTTCAA
CATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCTCATCCCTGGTT
ACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCGACGACACACAG
ATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACAA
GGAGCGGTGCTCAAGTTGTCTTCCACTCCTTCATCCAGCCCGTGCTCGGC
CGCTTCTTCCAGGGCGGTTCCACTTCGGCCAACCTCCGCGCCCAGGCCGA
GGCTGCTGCTAAGGACCAGTAACCTTCTACTATATCTTCAAGTTCGCCCT
TGTCCTCTGGATGTCTCTTCCCCAGACCAATACTGGGTTGTTTACGCCTT
CTTCACCGTCATTGAGAGCGCCATCTCTGCCCCCTACTGGTTCCCTCTCC
AAGTACCCTGTCCTCAACAACTTGGAGCGCCAGACCTCCGTCCCCAAGGT
CTACGTGATCCTGGGCCTGGTCGGCGTCTACTTCTTCTTGGTCTTCTTCA
ACATCGCCGGTGAATTCCTCGTCAACCTCGCTGGTTTCCTCATCCCTGGT
TACTACTCCCTGAACGCTCTGTTCACCGCCGGAAAGGCCGACGACACACA
GATGGCCTCTTTCCAGGATCGTGCTCAGCACGCCATTGCCCAGCTCGACA
AGGAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YOP1ATCC10864_005177Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005177-T1ATCC10864_005177-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005177-T1.cdsATCC10864_005177-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005177-T1.exon5ATCC10864_005177-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_005177-T1.exon4ATCC10864_005177-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005177-T1.exon3ATCC10864_005177-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005177-T1.exon2ATCC10864_005177-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005177-T1.exon1ATCC10864_005177-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR004345
PFAMPF03134
Properties
Property NameValue
NoteBUSCO:EOG09264USX
ProductER membrane protein DP1/Yop1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:288788..289919 -
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