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ATCC10864_005214-T1, ATCC10864_005214-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005214-T1
Unique NameATCC10864_005214-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:411329..411963-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005214-T1 ID=ATCC10864_005214-T1|Name=ATCC10864_005214-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=635bp|location=Sequence derived from alignment at MCQH01000140:411329..411963- (Aspergillus niger ATCC 10864)
ATGTCCTTCTACGTCGCCCCCAGCCAGCAGCGCACTCTCCGCGCCTGCAT
GGTGTGCTCGCTCGTTCAACTGCACAGCGTACGTTCAGCTGCTACCTCCC
AATTAAAACCAACCCAACCTAACCCGAACAACAACTAACATTTTCTCCTT
TCTTACTGCTTAGAAATTCATGCGCGAAGGCTGTCCCAACTGCGACAATG
TCCTCGGCCTCCGCGGCAACAACGACGCGATCCAAGAATGCACGTCGCAG
GTCTTCGAGGGCCTGGTGACGCTCCGCGATCCCACAACGAGCTGGGTGGC
TAGGTGGCAGAGATTGGATAGTTATGTGCCGGGGACGTATGCGGTTAAGG
TTACGGGATCGGTGAGTACTCTCGCCCACCCATACTGAACTTCAATTATG
TCCGGGGGTGGTGGTGAAGAGAATATTGGGCTAACGGTGATGGGTGAACA
GCTTCCCGATGAGATTATTTCCAGTTTGGAGGATTCGGGTGTCAAGTATA
TTCCGTATGTTGCCCTTCTATTCCTTCTTTGCATGTCTTTGCGTTGTGTG
TTGCGTGTTGGATTAATTGATGAGTGCTGATTATTATGTGTCTCGATACA
GGAGGGATGGTAGCACGGGTGAAGAGGAGGCGTGA
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Coding sequence (CDS) from alignment at MCQH01000140:411329..411963-

>ATCC10864_005214-T1 ID=ATCC10864_005214-T1|Name=ATCC10864_005214-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1452bp|location=Sequence derived from alignment at MCQH01000140:411329..411963- (Aspergillus niger ATCC 10864)
GAGGGATGGTAGCACGGGTGAAGAGGAGGCGTGACTTCCCGATGAGATTA
TTTCCAGTTTGGAGGATTCGGGTGTCAAGTATATTCCAAATTCATGCGCG
AAGGCTGTCCCAACTGCGACAATGTCCTCGGCCTCCGCGGCAACAACGAC
GCGATCCAAGAATGCACGTCGCAGGTCTTCGAGGGCCTGGTGACGCTCCG
CGATCCCACAACGAGCTGGGTGGCTAGGTGGCAGAGATTGGATAGTTATG
TGCCGGGGACGTATGCGGTTAAGGTTACGGGATCGATGTCCTTCTACGTC
GCCCCCAGCCAGCAGCGCACTCTCCGCGCCTGCATGGTGTGCTCGCTCGT
TCAACTGCACAGCGAGGGATGGTAGCACGGGTGAAGAGGAGGCGTGACTT
CCCGATGAGATTATTTCCAGTTTGGAGGATTCGGGTGTCAAGTATATTCC
AAATTCATGCGCGAAGGCTGTCCCAACTGCGACAATGTCCTCGGCCTCCG
CGGCAACAACGACGCGATCCAAGAATGCACGTCGCAGGTCTTCGAGGGCC
TGGTGACGCTCCGCGATCCCACAACGAGCTGGGTGGCTAGGTGGCAGAGA
TTGGATAGTTATGTGCCGGGGACGTATGCGGTTAAGGTTACGGGATCGAT
GTCCTTCTACGTCGCCCCCAGCCAGCAGCGCACTCTCCGCGCCTGCATGG
TGTGCTCGCTCGTTCAACTGCACAGCGAGGGATGGTAGCACGGGTGAAGA
GGAGGCGTGACTTCCCGATGAGATTATTTCCAGTTTGGAGGATTCGGGTG
TCAAGTATATTCCAAATTCATGCGCGAAGGCTGTCCCAACTGCGACAATG
TCCTCGGCCTCCGCGGCAACAACGACGCGATCCAAGAATGCACGTCGCAG
GTCTTCGAGGGCCTGGTGACGCTCCGCGATCCCACAACGAGCTGGGTGGC
TAGGTGGCAGAGATTGGATAGTTATGTGCCGGGGACGTATGCGGTTAAGG
TTACGGGATCGATGTCCTTCTACGTCGCCCCCAGCCAGCAGCGCACTCTC
CGCGCCTGCATGGTGTGCTCGCTCGTTCAACTGCACAGCGAGGGATGGTA
GCACGGGTGAAGAGGAGGCGTGACTTCCCGATGAGATTATTTCCAGTTTG
GAGGATTCGGGTGTCAAGTATATTCCAAATTCATGCGCGAAGGCTGTCCC
AACTGCGACAATGTCCTCGGCCTCCGCGGCAACAACGACGCGATCCAAGA
ATGCACGTCGCAGGTCTTCGAGGGCCTGGTGACGCTCCGCGATCCCACAA
CGAGCTGGGTGGCTAGGTGGCAGAGATTGGATAGTTATGTGCCGGGGACG
TATGCGGTTAAGGTTACGGGATCGATGTCCTTCTACGTCGCCCCCAGCCA
GCAGCGCACTCTCCGCGCCTGCATGGTGTGCTCGCTCGTTCAACTGCACA
GC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0032786positive regulation of DNA-templated transcription, elongation
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPT4ATCC10864_005214Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005214-T1ATCC10864_005214-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005214-T1.cdsATCC10864_005214-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005214-T1.exon4ATCC10864_005214-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005214-T1.exon3ATCC10864_005214-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005214-T1.exon2ATCC10864_005214-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005214-T1.exon1ATCC10864_005214-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR022800
InterProIPR029040
InterProIPR038510
PFAMPF06093
InterProIPR009287
Properties
Property NameValue
NoteBUSCO:EOG09265BBJ
Producttranscription elongation factor spt4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:411329..411963 -
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