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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000140:579018..580362+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005273-T1 ID=ATCC10864_005273-T1|Name=ATCC10864_005273-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1345bp|location=Sequence derived from alignment at MCQH01000140:579018..580362+ (Aspergillus niger ATCC 10864)
ATGATCGAAGACGAAATATACCGGTCATCCTCTCAGTTCCGACTGTGGTC
CTTCACCGAAGCATCGCTGAAGCAATTACGAGCAACCACCAACTCCGTCG
CGAGTGACCGAGTGCGAGCAGCTCTACGAAGAGCACAAGAGGCTCGAAGA
TCAGCCACCTCCTCCACGACAGGGACACCGGCCCCCGGAAGCGATGCGGA
GAACAAGGCAACGGAAGAGAAACAAATCGAGTGCTTGACACCCGAAGAAG
AGCAGCAAGTCGTGGACTACTACTCCGAACAAATCATACAACTAGGGGAG
AACTACAAGCCACCACTTCCCACCATCGTGAGAGTACGACAGCCCTCCTA
TCCCATACCTGCAAACCTCAAAGCTAACCTACCCATCCCCAAAGGCCACC
GCAATCCAATACCTCCGCCGCTTCTACCTCACCAACTCCCCGATGACCTA
CCACCCCAAACAAATCATGCCGTGCGCCCTCTTCCTCGCCACCAAAACCG
ACAACTACTACCTCTCCCTACGGCAATTCGCCGAAGGCGTTCCCGGCCAA
ACCTCCGCAGACGACATAATCGCCCCAGAATTTCTCGTCATGCAAAGCCT
CCGCTTCACCTTCGACGTGCGCCACCCCTTCCGCGGCCTCGAAGGCGGCA
TCATGGAACTCCGCGCCATATCCCAAGGCCAAGGCCAACCAGCACCACAC
CTCCAGCAATCCCAAACCCCCGAAGACCTCCGTAGGACTCTCCTCTCCCT
CTCCCCCTCGTCCGCCACCGCAAACACAATGAACGACCGCATCTCCCGCG
CCCACCACTCGACCCGCGAGATCCTCAAAGCCGCCGCGCAAATCACAGAC
GCCTACTTCCTCTACACCCCCTCGCAGATCTGGCTCTCCGCGTTCCTCCT
CGCCGATCGCCCCTTGGCTGAATTCTACCTCGACACGAAACTAGGCGGTC
CCATCATATCATCAACAAACCAAGATCAAAACCCCCTTTACGCCCTACGC
ACGAAACTCCTCTCCACCCTCACAAACTGCTCCGCCCTCCTGCAGGCATA
CAAGCCCTTCGCATCCGACGAAGCCCGCATGAAGACCCTCAAACGCATCG
TCGGGAAGAAACTCTACCATTGCCAGAACCCAGAGAAAGCCAATATCGCA
GGCCAGAAACGCATCCCTGCCGCTGCTGCGGCCGCGGCCGCAGCTGCAGC
TGCAGCAGGCGAGTCGGGGACGTCAGAAAGCGAAATGGAGCGTCTAGCGA
AGAAGCGGAAGCTAGAGCGGGGGAGTGAGACGAAAGACCTCTTCGGAGGG
GAGTTAGTCACGCAGCGGACTAAGGAGAGGCAGATGGAGGGGTAA back to topCoding sequence (CDS) from alignment at MCQH01000140:579018..580362+ >ATCC10864_005273-T1 ID=ATCC10864_005273-T1|Name=ATCC10864_005273-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2568bp|location=Sequence derived from alignment at MCQH01000140:579018..580362+ (Aspergillus niger ATCC 10864)
ATGATCGAAGACGAAATATACCGGTCATCCTCTCAGTTCCGACTGTGGTC
CTTCACCGAAGCATCGCTGAAGCAATTACGAGCAACCACCAACTCCGTCG
CGAGTGACCGAGTGCGAGCAGCTCTACGAAGAGCACAAGAGGCTCGAAGA
TCAGCCACCTCCTCCACGACAGGGACACCGGCCCCCGGAAGCGATGCGGA
GAACAAGGCAACGGAAGAGAAACAAATCGAGTGCTTGACACCCGAAGAAG
AGCAGCAAGTCGTGGACTACTACTCCGAACAAATCATACAACTAGGGGAG
AACTACAAGCCACCACTTCCCACCATCGTGAGAGCCACCGCAATCCAATA
CCTCCGCCGCTTCTACCTCACCAACTCCCCGATGACCTACCACCCCAAAC
AAATCATGCCGTGCGCCCTCTTCCTCGCCACCAAAACCGACAACTACTAC
CTCTCCCTACGGCAATTCGCCGAAGGCGTTCCCGGCCAAACCTCCGCAGA
CGACATAATCGCCCCAGAATTTCTCGTCATGCAAAGCCTCCGCTTCACCT
TCGACGTGCGCCACCCCTTCCGCGGCCTCGAAGGCGGCATCATGGAACTC
CGCGCCATATCCCAAGGCCAAGGCCAACCAGCACCACACCTCCAGCAATC
CCAAACCCCCGAAGACCTCCGTAGGACTCTCCTCTCCCTCTCCCCCTCGT
CCGCCACCGCAAACACAATGAACGACCGCATCTCCCGCGCCCACCACTCG
ACCCGCGAGATCCTCAAAGCCGCCGCGCAAATCACAGACGCCTACTTCCT
CTACACCCCCTCGCAGATCTGGCTCTCCGCGTTCCTCCTCGCCGATCGCC
CCTTGGCTGAATTCTACCTCGACACGAAACTAGGCGGTCCCATCATATCA
TCAACAAACCAAGATCAAAACCCCCTTTACGCCCTACGCACGAAACTCCT
CTCCACCCTCACAAACTGCTCCGCCCTCCTGCAGGCATACAAGCCCTTCG
CATCCGACGAAGCCCGCATGAAGACCCTCAAACGCATCGTCGGGAAGAAA
CTCTACCATTGCCAGAACCCAGAGAAAGCCAATATCGCAGGCCAGAAACG
CATCCCTGCCGCTGCTGCGGCCGCGGCCGCAGCTGCAGCTGCAGCAGGCG
AGTCGGGGACGTCAGAAAGCGAAATGGAGCGTCTAGCGAAGAAGCGGAAG
CTAGAGCGGGGGAGTGAGACGAAAGACCTCTTCGGAGGGGAGTTAGTCAC
GCAGCGGACTAAGGAGAGGCAGATGGAGGGGTAAATGATCGAAGACGAAA
TATACCGGTCATCCTCTCAGTTCCGACTGTGGTCCTTCACCGAAGCATCG
CTGAAGCAATTACGAGCAACCACCAACTCCGTCGCGAGTGACCGAGTGCG
AGCAGCTCTACGAAGAGCACAAGAGGCTCGAAGATCAGCCACCTCCTCCA
CGACAGGGACACCGGCCCCCGGAAGCGATGCGGAGAACAAGGCAACGGAA
GAGAAACAAATCGAGTGCTTGACACCCGAAGAAGAGCAGCAAGTCGTGGA
CTACTACTCCGAACAAATCATACAACTAGGGGAGAACTACAAGCCACCAC
TTCCCACCATCGTGAGAGCCACCGCAATCCAATACCTCCGCCGCTTCTAC
CTCACCAACTCCCCGATGACCTACCACCCCAAACAAATCATGCCGTGCGC
CCTCTTCCTCGCCACCAAAACCGACAACTACTACCTCTCCCTACGGCAAT
TCGCCGAAGGCGTTCCCGGCCAAACCTCCGCAGACGACATAATCGCCCCA
GAATTTCTCGTCATGCAAAGCCTCCGCTTCACCTTCGACGTGCGCCACCC
CTTCCGCGGCCTCGAAGGCGGCATCATGGAACTCCGCGCCATATCCCAAG
GCCAAGGCCAACCAGCACCACACCTCCAGCAATCCCAAACCCCCGAAGAC
CTCCGTAGGACTCTCCTCTCCCTCTCCCCCTCGTCCGCCACCGCAAACAC
AATGAACGACCGCATCTCCCGCGCCCACCACTCGACCCGCGAGATCCTCA
AAGCCGCCGCGCAAATCACAGACGCCTACTTCCTCTACACCCCCTCGCAG
ATCTGGCTCTCCGCGTTCCTCCTCGCCGATCGCCCCTTGGCTGAATTCTA
CCTCGACACGAAACTAGGCGGTCCCATCATATCATCAACAAACCAAGATC
AAAACCCCCTTTACGCCCTACGCACGAAACTCCTCTCCACCCTCACAAAC
TGCTCCGCCCTCCTGCAGGCATACAAGCCCTTCGCATCCGACGAAGCCCG
CATGAAGACCCTCAAACGCATCGTCGGGAAGAAACTCTACCATTGCCAGA
ACCCAGAGAAAGCCAATATCGCAGGCCAGAAACGCATCCCTGCCGCTGCT
GCGGCCGCGGCCGCAGCTGCAGCTGCAGCAGGCGAGTCGGGGACGTCAGA
AAGCGAAATGGAGCGTCTAGCGAAGAAGCGGAAGCTAGAGCGGGGGAGTG
AGACGAAAGACCTCTTCGGAGGGGAGTTAGTCACGCAGCGGACTAAGGAG
AGGCAGATGGAGGGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR013763 |
| PFAM | PF16899 |
| PFAM | PF00134 |
| InterPro | IPR036915 |
| InterPro | IPR043198 |
| InterPro | IPR006671 |
| InterPro | IPR031658 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263SFX |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000140 | supercontig | MCQH01000140:579018..580362 + |
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