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ATCC10864_005288-T1, ATCC10864_005288-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005288-T1
Unique NameATCC10864_005288-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000140:625778..627329-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005288-T1 ID=ATCC10864_005288-T1|Name=ATCC10864_005288-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1552bp|location=Sequence derived from alignment at MCQH01000140:625778..627329- (Aspergillus niger ATCC 10864)
ATGCCCCCTCCCGTCGGCAGATACGGGCCTACTGGCCTAACAGCTTCCTA
TACCCACCTACAGCAAGCCCATCTCCAGCAACAGCAACAAGCCCAACATC
ACCCGGCCCACGCCCAGTCGGCCAACTCAGCCCTCCCTCCTCCATCTCTC
GGTGGTCACCCCGGTTTTGCCGCCGGAAACCCGAACACGAATATCAATCC
GTTTACACTGTCCGGCACCGGTATCGCAAACGGTATGTCCGTCGCAGGGT
TCGCGAGTGCTGGGGATGGAGGCGGCACTGGACTCGCCAGCCATGCCGCC
CAGATGGGCTTCGCAAGAGGCGCGCAGATGCAGCAGCAGCAATTACATCA
GACTCACGATGGCCGACTAGCGCTCGAGGCCAAGGCCGGTGCGGTGAAGA
CACGGATACGTGACGTATGGAGCCACAATCTGGCTCAGGAAATGGCTATC
CTCCGGCAGTTTGTCGAGAAGTATCCCTACATCAGCATGGTAAGACGCAG
TTAGCTGTGGAGCTGGGAAACTGAAATGCTCGGCTGCTTTTACTGGGAAA
TGAGTGACGCTAACCTAGGCCCAGGACACCGAGTTCCCCGGTATCGTCGC
ACGTCCAATGGGAGCGTTCACGAATAAAGCAGATTACCATTATCAAACTC
TCCGGTGTAACGTCGATCTCCTCAAAATGATCCAGCTCGGTATCACCTTG
TTTTCTGCCGAAGGCGAGGTACCCCCGCCCAACGCTACGGATGCGAATGG
CCAGCCTCTCGGAAACAGCCTCGTCCCTGCGCCCTGCACATGGCAGTTCA
ACTTCCGGTTTTCTTTGGAGGAAGATATGTACGCACAAGAGTCCACGGCT
ATGTTGGCCAAGGCGGGTATCGATTTCTCGATGCATGAGAAGAACGGCAT
CGATCCATTCGAGTTTGGTGCTCTTCTGATCAGCTCGGGGCTCGTTCTCT
TGGAAGATGTCCATTGGGTCTCTTTCCACTCCGGCTATGATTTCGGATAT
CTTATGAAGATTATGCTCTGTAAACCTCTTCCGGAGAACGAAGAGGAATT
CCACAAACTACTGAAGATCTTCTTCCCGTCGCTGTATGATATCAAATACT
TGATGAAACATGCAGGACGCAATCAGGCTGTAAACGACTCTCCGTTAACG
CCAGCCGCTGCTCAGATCCTCACTAATCTCGGACAGAAGTCGGGTCTGCA
AGACATTGCGGATGAGCTCGGTGTCAAGCGCGTCGGCATCGCTCATCAGG
CAGGGTCGGACTCTCTCGTGACGGGTGAGATCTACTGGAAGATGCGCCAA
CTCGTCTTCAACGGCAGCATCGACGAGTCGAAATACTCAGGACAGATTTG
GGGCTTGAACGGTCAGATGCCTGCTCTGTTGTACCACATGCAGCCACACC
AAACTCCCAATCTCAACGGCGCCACAATTTACTCAGCTACCGGCACGCCA
AGCACACCCAACGCCGGTCACCTGGGCAGTCAAACACCCCATACACTGAC
ACCTGGTGCAACCGGCGGCGCCCTGGGGCAATTCCAGCTTGCCAAGTCAT
GA
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Coding sequence (CDS) from alignment at MCQH01000140:625778..627329-

>ATCC10864_005288-T1 ID=ATCC10864_005288-T1|Name=ATCC10864_005288-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2934bp|location=Sequence derived from alignment at MCQH01000140:625778..627329- (Aspergillus niger ATCC 10864)
GACACCGAGTTCCCCGGTATCGTCGCACGTCCAATGGGAGCGTTCACGAA
TAAAGCAGATTACCATTATCAAACTCTCCGGTGTAACGTCGATCTCCTCA
AAATGATCCAGCTCGGTATCACCTTGTTTTCTGCCGAAGGCGAGGTACCC
CCGCCCAACGCTACGGATGCGAATGGCCAGCCTCTCGGAAACAGCCTCGT
CCCTGCGCCCTGCACATGGCAGTTCAACTTCCGGTTTTCTTTGGAGGAAG
ATATGTACGCACAAGAGTCCACGGCTATGTTGGCCAAGGCGGGTATCGAT
TTCTCGATGCATGAGAAGAACGGCATCGATCCATTCGAGTTTGGTGCTCT
TCTGATCAGCTCGGGGCTCGTTCTCTTGGAAGATGTCCATTGGGTCTCTT
TCCACTCCGGCTATGATTTCGGATATCTTATGAAGATTATGCTCTGTAAA
CCTCTTCCGGAGAACGAAGAGGAATTCCACAAACTACTGAAGATCTTCTT
CCCGTCGCTGTATGATATCAAATACTTGATGAAACATGCAGGACGCAATC
AGGCTGTAAACGACTCTCCGTTAACGCCAGCCGCTGCTCAGATCCTCACT
AATCTCGGACAGAAGTCGGGTCTGCAAGACATTGCGGATGAGCTCGGTGT
CAAGCGCGTCGGCATCGCTCATCAGGCAGGGTCGGACTCTCTCGTGACGG
GTGAGATCTACTGGAAGATGCGCCAACTCGTCTTCAACGGCAGCATCGAC
GAGTCGAAATACTCAGGACAGATTTGGGGCTTGAACGGTCAGATGCCTGC
TCTGTTGTACCACATGCAGCCACACCAAACTCCCAATCTCAACGGCGCCA
CAATTTACTCAGCTACCGGCACGCCAAGCACACCCAACGCCGGTCACCTG
GGCAGTCAAACACCCCATACACTGACACCTGGTGCAACCGGCGGCGCCCT
GGGGCAATTCCAGCTTGCCAAGTCATGAATGCCCCCTCCCGTCGGCAGAT
ACGGGCCTACTGGCCTAACAGCTTCCTATACCCACCTACAGCAAGCCCAT
CTCCAGCAACAGCAACAAGCCCAACATCACCCGGCCCACGCCCAGTCGGC
CAACTCAGCCCTCCCTCCTCCATCTCTCGGTGGTCACCCCGGTTTTGCCG
CCGGAAACCCGAACACGAATATCAATCCGTTTACACTGTCCGGCACCGGT
ATCGCAAACGGTATGTCCGTCGCAGGGTTCGCGAGTGCTGGGGATGGAGG
CGGCACTGGACTCGCCAGCCATGCCGCCCAGATGGGCTTCGCAAGAGGCG
CGCAGATGCAGCAGCAGCAATTACATCAGACTCACGATGGCCGACTAGCG
CTCGAGGCCAAGGCCGGTGCGGTGAAGACACGGATACGTGACGTATGGAG
CCACAATCTGGCTCAGGAAATGGCTATCCTCCGGCAGTTTGTCGAGAAGT
ATCCCTACATCAGCATGGACACCGAGTTCCCCGGTATCGTCGCACGTCCA
ATGGGAGCGTTCACGAATAAAGCAGATTACCATTATCAAACTCTCCGGTG
TAACGTCGATCTCCTCAAAATGATCCAGCTCGGTATCACCTTGTTTTCTG
CCGAAGGCGAGGTACCCCCGCCCAACGCTACGGATGCGAATGGCCAGCCT
CTCGGAAACAGCCTCGTCCCTGCGCCCTGCACATGGCAGTTCAACTTCCG
GTTTTCTTTGGAGGAAGATATGTACGCACAAGAGTCCACGGCTATGTTGG
CCAAGGCGGGTATCGATTTCTCGATGCATGAGAAGAACGGCATCGATCCA
TTCGAGTTTGGTGCTCTTCTGATCAGCTCGGGGCTCGTTCTCTTGGAAGA
TGTCCATTGGGTCTCTTTCCACTCCGGCTATGATTTCGGATATCTTATGA
AGATTATGCTCTGTAAACCTCTTCCGGAGAACGAAGAGGAATTCCACAAA
CTACTGAAGATCTTCTTCCCGTCGCTGTATGATATCAAATACTTGATGAA
ACATGCAGGACGCAATCAGGCTGTAAACGACTCTCCGTTAACGCCAGCCG
CTGCTCAGATCCTCACTAATCTCGGACAGAAGTCGGGTCTGCAAGACATT
GCGGATGAGCTCGGTGTCAAGCGCGTCGGCATCGCTCATCAGGCAGGGTC
GGACTCTCTCGTGACGGGTGAGATCTACTGGAAGATGCGCCAACTCGTCT
TCAACGGCAGCATCGACGAGTCGAAATACTCAGGACAGATTTGGGGCTTG
AACGGTCAGATGCCTGCTCTGTTGTACCACATGCAGCCACACCAAACTCC
CAATCTCAACGGCGCCACAATTTACTCAGCTACCGGCACGCCAAGCACAC
CCAACGCCGGTCACCTGGGCAGTCAAACACCCCATACACTGACACCTGGT
GCAACCGGCGGCGCCCTGGGGCAATTCCAGCTTGCCAAGTCATGAATGCC
CCCTCCCGTCGGCAGATACGGGCCTACTGGCCTAACAGCTTCCTATACCC
ACCTACAGCAAGCCCATCTCCAGCAACAGCAACAAGCCCAACATCACCCG
GCCCACGCCCAGTCGGCCAACTCAGCCCTCCCTCCTCCATCTCTCGGTGG
TCACCCCGGTTTTGCCGCCGGAAACCCGAACACGAATATCAATCCGTTTA
CACTGTCCGGCACCGGTATCGCAAACGGTATGTCCGTCGCAGGGTTCGCG
AGTGCTGGGGATGGAGGCGGCACTGGACTCGCCAGCCATGCCGCCCAGAT
GGGCTTCGCAAGAGGCGCGCAGATGCAGCAGCAGCAATTACATCAGACTC
ACGATGGCCGACTAGCGCTCGAGGCCAAGGCCGGTGCGGTGAAGACACGG
ATACGTGACGTATGGAGCCACAATCTGGCTCAGGAAATGGCTATCCTCCG
GCAGTTTGTCGAGAAGTATCCCTACATCAGCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030014CCR4-NOT complex
Vocabulary: Molecular Function
TermDefinition
GO:0004535poly(A)-specific ribonuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005288ATCC10864_005288Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005288-T1ATCC10864_005288-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005288-T1.cdsATCC10864_005288-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005288-T1.exon2ATCC10864_005288-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005288-T1.exon1ATCC10864_005288-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR006941
InterProIPR012337
InterProIPR036397
InterProIPR039637
Properties
Property NameValue
NoteBUSCO:EOG09262K67
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000140supercontigMCQH01000140:625778..627329 -
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