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ATCC10864_005357-T1, ATCC10864_005357-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005357-T1
Unique NameATCC10864_005357-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:85662..86267-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005357-T1 ID=ATCC10864_005357-T1|Name=ATCC10864_005357-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=606bp|location=Sequence derived from alignment at MCQH01000142:85662..86267- (Aspergillus niger ATCC 10864)
ATGCCTCAGGAAATCTCCGACATCAAGCAGTTCATCGAGGTCTGCCGCCG
CAAGGATGCGTCCTGTACGTTTACCCGACCTTTAGCCGCTTAGTTATCAT
GAGGTGGAAAGCTCCGCGGAGCTAGCTCTTTGAGGGGGAAGCTCGAGACG
GGTACCCGACTATCATCAAAAGGGCAAATTGGAATGGTTGATCGGGATGG
ATGAATGATAAGAAGTGGAGGCTAACGCGTGATGGTCTTGTCTTTCAAAC
AGCTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGG
TCCGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAG
GCCGACAAGCTCAAGCAGAGCCTGCCCCCTGGTGCGTTTGCTCCCGTCAC
CTGATCGACTGTTTCTTTGGATGGTGTTATGGAACAAGATACATGTCGTC
GGACGCGTTTGTTTCCTTACGACTTGAGATGGGCATTGATGTGGACCTCG
GCTATTGCATGACATCATTCGGATTGAGTACTAACATCAATTGTTTTCTC
ACACAGCTCTCAAGGTTGTCGACGTCTCCAAGGGAGACAAGAAGAAGGCT
CTGTAA
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Coding sequence (CDS) from alignment at MCQH01000142:85662..86267-

>ATCC10864_005357-T1 ID=ATCC10864_005357-T1|Name=ATCC10864_005357-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=729bp|location=Sequence derived from alignment at MCQH01000142:85662..86267- (Aspergillus niger ATCC 10864)
CTCTCAAGGTTGTCGACGTCTCCAAGGGAGACAAGAAGAAGGCTCTGTAA
CTGCTCGCATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGGTC
CGCTGCTCCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAGGC
CGACAAGCTCAAGCAGAGCCTGCCCCCTGATGCCTCAGGAAATCTCCGAC
ATCAAGCAGTTCATCGAGGTCTGCCGCCGCAAGGATGCGTCCTCTCTCAA
GGTTGTCGACGTCTCCAAGGGAGACAAGAAGAAGGCTCTGTAACTGCTCG
CATCAAGCGCAACCCCAAGGACCAGCAGATCAAGTTCAAGGTCCGCTGCT
CCCGCTTCGTCTACACCCTTGTCCTGAAGGACTCCGACAAGGCCGACAAG
CTCAAGCAGAGCCTGCCCCCTGATGCCTCAGGAAATCTCCGACATCAAGC
AGTTCATCGAGGTCTGCCGCCGCAAGGATGCGTCCTCTCTCAAGGTTGTC
GACGTCTCCAAGGGAGACAAGAAGAAGGCTCTGTAACTGCTCGCATCAAG
CGCAACCCCAAGGACCAGCAGATCAAGTTCAAGGTCCGCTGCTCCCGCTT
CGTCTACACCCTTGTCCTGAAGGACTCCGACAAGGCCGACAAGCTCAAGC
AGAGCCTGCCCCCTGATGCCTCAGGAAATCTCCGACATCAAGCAGTTCAT
CGAGGTCTGCCGCCGCAAGGATGCGTCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL38ATCC10864_005357Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005357-T1ATCC10864_005357-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005357-T1.cdsATCC10864_005357-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005357-T1.exon3ATCC10864_005357-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005357-T1.exon2ATCC10864_005357-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005357-T1.exon1ATCC10864_005357-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR038464
InterProIPR002675
PFAMPF01781
Properties
Property NameValue
NoteBUSCO:EOG09265OQH
Product60S ribosomal protein L38
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:85662..86267 -
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