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ATCC10864_005369-T1, ATCC10864_005369-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005369-T1
Unique NameATCC10864_005369-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:114199..114955+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005369-T1 ID=ATCC10864_005369-T1|Name=ATCC10864_005369-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=757bp|location=Sequence derived from alignment at MCQH01000142:114199..114955+ (Aspergillus niger ATCC 10864)
ATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGCGAGCTGCG
CATCCAGAAGCTCGTGCTCAACATCTCCGTCGGCGAGTCTGGTGACAGAC
TTACTCGCGCTGCTAAGGTGCTTGAGCAGCTGAGCGGTCAGACTCCGGTC
TACAGTAAGAACGCCCGATCCCGATGAATCCGAGAAATCCGAACACGAAG
CAGCCGAGGAAGAAGGATATGACAACTGTATTATGGAATGGATGGCTGAT
GGGATGATTTTTTCAACGTTTAGGCAAGGCCCGTTATACCGTCCGTACCT
TCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTTACCGTCCGTGGT
CCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCAAGGAGTACGA
GCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCGGTTTCGGTATCT
CCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGTATCGGTATCTAC
GGCATGGACTTCTACTGCTGCATGTGAGTGCATTTGGACCTCTACGCAGT
CCTGGTTCGACAGATCCATCGGTGTCAATCCAGATCGAGCAGGACAAGTC
GAGTATCAGCAACTGACTTGGAATCAATAGGACCCGCCCTGGTGAGCGTG
TCGCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCACCGTATC
ACCCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACGGTATCGT
CCGGTAA
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Coding sequence (CDS) from alignment at MCQH01000142:114199..114955+

>ATCC10864_005369-T1 ID=ATCC10864_005369-T1|Name=ATCC10864_005369-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1593bp|location=Sequence derived from alignment at MCQH01000142:114199..114955+ (Aspergillus niger ATCC 10864)
ATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTATGCGCGAGCTGCG
CATCCAGAAGCTCGTGCTCAACATCTCCGTCGGCGAGTCTGGTGACAGAC
TTACTCGCGCTGCTAAGGTGCTTGAGCAGCTGAGCGGTCAGACTCCGGTC
TACAGCAAGGCCCGTTATACCGTCCGTACCTTCGGTATCCGTCGTAACGA
GAAGATCTCCGTCCACGTTACCGTCCGTGGTCCCAAGGCCGAGGAGATCC
TTGAGCGTGGTCTCAAGGTCAAGGAGTACGAGCTCCGCAAGCGCAACTTC
TCTGAGACCGGTAACTTCGGTTTCGGTATCTCCGAGCACATCGATCTGGG
TATCAAGTACGACCCCGGTATCGGTATCTACGGCATGGACTTCTACTGCT
GCATGACCCGCCCTGGTGAGCGTGTCGCCAAGCGCCGCCGCTGCAAGGCC
CGTATCGGCTCCCAGCACCGTATCACCCAGAACGAGACCATCAAGTGGTT
CAAGAACCGCTTCGACGGTATCGTCCGGTAAATGCAGTCGGAATCCAAGG
ACAAGTCCGCCAACCCTATGCGCGAGCTGCGCATCCAGAAGCTCGTGCTC
AACATCTCCGTCGGCGAGTCTGGTGACAGACTTACTCGCGCTGCTAAGGT
GCTTGAGCAGCTGAGCGGTCAGACTCCGGTCTACAGCAAGGCCCGTTATA
CCGTCCGTACCTTCGGTATCCGTCGTAACGAGAAGATCTCCGTCCACGTT
ACCGTCCGTGGTCCCAAGGCCGAGGAGATCCTTGAGCGTGGTCTCAAGGT
CAAGGAGTACGAGCTCCGCAAGCGCAACTTCTCTGAGACCGGTAACTTCG
GTTTCGGTATCTCCGAGCACATCGATCTGGGTATCAAGTACGACCCCGGT
ATCGGTATCTACGGCATGGACTTCTACTGCTGCATGACCCGCCCTGGTGA
GCGTGTCGCCAAGCGCCGCCGCTGCAAGGCCCGTATCGGCTCCCAGCACC
GTATCACCCAGAACGAGACCATCAAGTGGTTCAAGAACCGCTTCGACGGT
ATCGTCCGGTAAATGCAGTCGGAATCCAAGGACAAGTCCGCCAACCCTAT
GCGCGAGCTGCGCATCCAGAAGCTCGTGCTCAACATCTCCGTCGGCGAGT
CTGGTGACAGACTTACTCGCGCTGCTAAGGTGCTTGAGCAGCTGAGCGGT
CAGACTCCGGTCTACAGCAAGGCCCGTTATACCGTCCGTACCTTCGGTAT
CCGTCGTAACGAGAAGATCTCCGTCCACGTTACCGTCCGTGGTCCCAAGG
CCGAGGAGATCCTTGAGCGTGGTCTCAAGGTCAAGGAGTACGAGCTCCGC
AAGCGCAACTTCTCTGAGACCGGTAACTTCGGTTTCGGTATCTCCGAGCA
CATCGATCTGGGTATCAAGTACGACCCCGGTATCGGTATCTACGGCATGG
ACTTCTACTGCTGCATGACCCGCCCTGGTGAGCGTGTCGCCAAGCGCCGC
CGCTGCAAGGCCCGTATCGGCTCCCAGCACCGTATCACCCAGAACGAGAC
CATCAAGTGGTTCAAGAACCGCTTCGACGGTATCGTCCGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL11ATCC10864_005369Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005369-T1.exon1ATCC10864_005369-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005369-T1.exon2ATCC10864_005369-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005369-T1.exon3ATCC10864_005369-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005369-T1.cdsATCC10864_005369-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005369-T1ATCC10864_005369-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR031310
PFAMPF00673
InterProIPR020929
PFAMPF00281
InterProIPR031309
InterProIPR002132
InterProIPR022803
Properties
Property NameValue
NoteBUSCO:EOG09264X8J
Product60S ribosomal protein L11
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:114199..114955 +
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