|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000142:166818..168503- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005386-T1 ID=ATCC10864_005386-T1|Name=ATCC10864_005386-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1686bp|location=Sequence derived from alignment at MCQH01000142:166818..168503- (Aspergillus niger ATCC 10864) ATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCCCC
CATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCTCG
ACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCT
CCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCT
GGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCAAG
CCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGACG
GTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTT
GGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTACA
AGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAG
AGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCG
CTACAGACTGTTGAGACATGTGTCGTACGTTGAACCTCGGACTCAAGTGT
GGACAAATTCTTCAGTGCTAACTCAGAGACCCAACTTAGTTTCGTCGACT
GCCCCGGTCACGATATTCTGATGAGTACTATGTTGTCTGGTGCCGCCGTC
ATGGACGCTGCCCTCCTCCTTATTGCCGGAAACGAAACTTGCCCTCAACC
TCAGACTTCGGAGCACTTGGCTGCCATCGAAATCATGAAGCTCAGCCACA
TCATCATTTTGCAAAACAAGGTGGACTTGATGAGAGAGGATGGTGCCCTG
CAACATTACCAGTCGATCTTGAAGTTCATCCGTGGTACTGTCGCCGATGG
CTCTCCGATCATTCCCATTTCTGCACAGCTCAAGTACAACATCGATGCTG
TCAACGAATACCTGGTTTCGCACATTCCCGTCCCCGTCCGCGATTTCACC
GCTTCCCCCCACATGATCGTCATTCGTTCCTTCGATGTGAACAAGCCTGG
TGCCGAAATTGAGGAGCTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGA
CTGGTGTTCTGAAGCAGAACGACGAGATTGAGATTCGTCCCGGTCTGGTC
ACCAAGGACGAGAACGGCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGT
CATGTCCCTCTTTGCCGAGCACAACGACCTCAAGTTTGCCGTCCCTGGTG
GTTTGATTGGTGTCGGTACTCGTGTAGACCCTACTCTGTGCCGTGCTGAT
CGTCTCGTTGGTTTCGTCCTGGGTCACCGCGGACGCCTTCCCGCTATCTA
CACTGAGTTGGAAGTCAACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCA
AGACTGCCGATGGCAAGCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAG
GTTCTCATGGTCAACATCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGG
TGTCAAGGCTGATGCTGCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCG
AGGTCGGAGAGAAGATTGCCATCAGTCGGAGAATTGAGAAGCACTGGCGT
CTGATCGGTTGGGCCAACATTGTCGCGTAAGTCTTATGCTCCACTCCTTA
GCTTGCGATTTCTTCCCAGCTCTTGAGAGAATGATGTTACTAATTACGGA
AACAGTGGTAACACCCTTGAGCCCATCCTGAACTAA back to topCoding sequence (CDS) from alignment at MCQH01000142:166818..168503- >ATCC10864_005386-T1 ID=ATCC10864_005386-T1|Name=ATCC10864_005386-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4626bp|location=Sequence derived from alignment at MCQH01000142:166818..168503- (Aspergillus niger ATCC 10864) TGGTAACACCCTTGAGCCCATCCTGAACTAATTTCGTCGACTGCCCCGGT CACGATATTCTGATGAGTACTATGTTGTCTGGTGCCGCCGTCATGGACGC TGCCCTCCTCCTTATTGCCGGAAACGAAACTTGCCCTCAACCTCAGACTT CGGAGCACTTGGCTGCCATCGAAATCATGAAGCTCAGCCACATCATCATT TTGCAAAACAAGGTGGACTTGATGAGAGAGGATGGTGCCCTGCAACATTA CCAGTCGATCTTGAAGTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGA TCATTCCCATTTCTGCACAGCTCAAGTACAACATCGATGCTGTCAACGAA TACCTGGTTTCGCACATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCC CCACATGATCGTCATTCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAA TTGAGGAGCTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTT CTGAAGCAGAACGACGAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGA CGAGAACGGCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCC TCTTTGCCGAGCACAACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATT GGTGTCGGTACTCGTGTAGACCCTACTCTGTGCCGTGCTGATCGTCTCGT TGGTTTCGTCCTGGGTCACCGCGGACGCCTTCCCGCTATCTACACTGAGT TGGAAGTCAACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCC GATGGCAAGCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCAT GGTCAACATCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGG CTGATGCTGCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGA GAGAAGATTGCCATCAGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGG TTGGGCCAACATTGTCGCATGGCTGCCAACGGCGACTTCTCTGACGACGA GTCCCAGCCTGGATCCCCCATGCTCGATGCGAACGGTCACGATGACATCG AAGAGCAAGAGCCCCTCGACCAGGAGGCCAAGCCTCTGAAGTCTGCGATG AAGAAGGAAGTTCCTCCTCCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCA GCCGAATCCGGAGACTCTGGACCTGTCCACCCTGACTCCTTTGACCCCCG AAATTATTGCGCGCCAAGCCACAATCAACATTGGCACCATCGGTCACGTC GCTCACGGCAAGTCGACGGTCGTTAAGGCTATCTCCGAGGTCCAGACTGT CCGTTTCAAGAACGAGTTGGAGCGAAACATTACGATCAAGCTGGGTTATG CCAACGCAAAGATCTACAAGTGCGACAACCCCGAGTGCCCTAGGCCGACA TGCTTTAAGAGCTTTAAGAGTGAGAAGGAAGTCGACCCGCCTTGTGAGAG GGATGGCTGCGGTGGCCGCTACAGACTGTTGAGACATGTGTCTGGTAACA CCCTTGAGCCCATCCTGAACTAATTTCGTCGACTGCCCCGGTCACGATAT TCTGATGAGTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTCC TCCTTATTGCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGCAC TTGGCTGCCATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAAAA CAAGGTGGACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTCGA TCTTGAAGTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTCCC ATTTCTGCACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTGGT TTCGCACATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACATGA TCGTCATTCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGGAG CTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGCA GAACGACGAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAACG GCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGCC GAGCACAACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCGG TACTCGTGTAGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTCG TCCTGGGTCACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAGTC AACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCAA GCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAACA TCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGCT GCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGAT TGCCATCAGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGCCA ACATTGTCGCATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGC CTGGATCCCCCATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAA GAGCCCCTCGACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGA AGTTCCTCCTCCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATC CGGAGACTCTGGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATT GCGCGCCAAGCCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGG CAAGTCGACGGTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCA AGAACGAGTTGGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCA AAGATCTACAAGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAA GAGCTTTAAGAGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCT GCGGTGGCCGCTACAGACTGTTGAGACATGTGTCTGGTAACACCCTTGAG CCCATCCTGAACTAATTTCGTCGACTGCCCCGGTCACGATATTCTGATGA GTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTCCTCCTTATT GCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGCACTTGGCTGC CATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAAAACAAGGTGG ACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTCGATCTTGAAG TTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTCCCATTTCTGC ACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTGGTTTCGCACA TTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACATGATCGTCATT CGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGGAGCTGAAGGG TGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGCAGAACGACG AGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAACGGCAAGATT CAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGCCGAGCACAA CGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCGGTACTCGTG TAGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTCGTCCTGGGT CACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAGTCAACTACTT CTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCAAGCAGGCCA AGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAACATCGGTTCT ACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGCTGCCAAGCT CAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGATTGCCATCA GTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGCCAACATTGTC GCATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCC CCCATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCT CGACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTC CTCCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACT CTGGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCA AGCCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGA CGGTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAG TTGGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTA CAAGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTA AGAGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGC CGCTACAGACTGTTGAGACATGTGTC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0003924 | GTPase activity |
GO:0000049 | tRNA binding |
GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
Database | Accession |
InterPro | IPR044127 |
InterPro | IPR009000 |
PFAM | PF00009 |
InterPro | IPR004161 |
PFAM | PF03144 |
InterPro | IPR000795 |
InterPro | IPR044128 |
PFAM | PF09173 |
InterPro | IPR009001 |
InterPro | IPR027417 |
InterPro | IPR015256 |
Properties
Property Name | Value |
Note | BUSCO:EOG09261TPN |
Product | eukaryotic translation initiation factor 2 subunit gamma |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
MCQH01000142 | supercontig | MCQH01000142:166818..168503 - |
|