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ATCC10864_005386-T1, ATCC10864_005386-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005386-T1
Unique NameATCC10864_005386-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:166818..168503-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005386-T1 ID=ATCC10864_005386-T1|Name=ATCC10864_005386-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1686bp|location=Sequence derived from alignment at MCQH01000142:166818..168503- (Aspergillus niger ATCC 10864)
ATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCCCC
CATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCTCG
ACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTCCT
CCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACTCT
GGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCAAG
CCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGACG
GTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAGTT
GGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTACA
AGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTAAG
AGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGCCG
CTACAGACTGTTGAGACATGTGTCGTACGTTGAACCTCGGACTCAAGTGT
GGACAAATTCTTCAGTGCTAACTCAGAGACCCAACTTAGTTTCGTCGACT
GCCCCGGTCACGATATTCTGATGAGTACTATGTTGTCTGGTGCCGCCGTC
ATGGACGCTGCCCTCCTCCTTATTGCCGGAAACGAAACTTGCCCTCAACC
TCAGACTTCGGAGCACTTGGCTGCCATCGAAATCATGAAGCTCAGCCACA
TCATCATTTTGCAAAACAAGGTGGACTTGATGAGAGAGGATGGTGCCCTG
CAACATTACCAGTCGATCTTGAAGTTCATCCGTGGTACTGTCGCCGATGG
CTCTCCGATCATTCCCATTTCTGCACAGCTCAAGTACAACATCGATGCTG
TCAACGAATACCTGGTTTCGCACATTCCCGTCCCCGTCCGCGATTTCACC
GCTTCCCCCCACATGATCGTCATTCGTTCCTTCGATGTGAACAAGCCTGG
TGCCGAAATTGAGGAGCTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGA
CTGGTGTTCTGAAGCAGAACGACGAGATTGAGATTCGTCCCGGTCTGGTC
ACCAAGGACGAGAACGGCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGT
CATGTCCCTCTTTGCCGAGCACAACGACCTCAAGTTTGCCGTCCCTGGTG
GTTTGATTGGTGTCGGTACTCGTGTAGACCCTACTCTGTGCCGTGCTGAT
CGTCTCGTTGGTTTCGTCCTGGGTCACCGCGGACGCCTTCCCGCTATCTA
CACTGAGTTGGAAGTCAACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCA
AGACTGCCGATGGCAAGCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAG
GTTCTCATGGTCAACATCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGG
TGTCAAGGCTGATGCTGCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCG
AGGTCGGAGAGAAGATTGCCATCAGTCGGAGAATTGAGAAGCACTGGCGT
CTGATCGGTTGGGCCAACATTGTCGCGTAAGTCTTATGCTCCACTCCTTA
GCTTGCGATTTCTTCCCAGCTCTTGAGAGAATGATGTTACTAATTACGGA
AACAGTGGTAACACCCTTGAGCCCATCCTGAACTAA
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Coding sequence (CDS) from alignment at MCQH01000142:166818..168503-

>ATCC10864_005386-T1 ID=ATCC10864_005386-T1|Name=ATCC10864_005386-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4626bp|location=Sequence derived from alignment at MCQH01000142:166818..168503- (Aspergillus niger ATCC 10864)
TGGTAACACCCTTGAGCCCATCCTGAACTAATTTCGTCGACTGCCCCGGT
CACGATATTCTGATGAGTACTATGTTGTCTGGTGCCGCCGTCATGGACGC
TGCCCTCCTCCTTATTGCCGGAAACGAAACTTGCCCTCAACCTCAGACTT
CGGAGCACTTGGCTGCCATCGAAATCATGAAGCTCAGCCACATCATCATT
TTGCAAAACAAGGTGGACTTGATGAGAGAGGATGGTGCCCTGCAACATTA
CCAGTCGATCTTGAAGTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGA
TCATTCCCATTTCTGCACAGCTCAAGTACAACATCGATGCTGTCAACGAA
TACCTGGTTTCGCACATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCC
CCACATGATCGTCATTCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAA
TTGAGGAGCTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTT
CTGAAGCAGAACGACGAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGA
CGAGAACGGCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCC
TCTTTGCCGAGCACAACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATT
GGTGTCGGTACTCGTGTAGACCCTACTCTGTGCCGTGCTGATCGTCTCGT
TGGTTTCGTCCTGGGTCACCGCGGACGCCTTCCCGCTATCTACACTGAGT
TGGAAGTCAACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCC
GATGGCAAGCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCAT
GGTCAACATCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGG
CTGATGCTGCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGA
GAGAAGATTGCCATCAGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGG
TTGGGCCAACATTGTCGCATGGCTGCCAACGGCGACTTCTCTGACGACGA
GTCCCAGCCTGGATCCCCCATGCTCGATGCGAACGGTCACGATGACATCG
AAGAGCAAGAGCCCCTCGACCAGGAGGCCAAGCCTCTGAAGTCTGCGATG
AAGAAGGAAGTTCCTCCTCCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCA
GCCGAATCCGGAGACTCTGGACCTGTCCACCCTGACTCCTTTGACCCCCG
AAATTATTGCGCGCCAAGCCACAATCAACATTGGCACCATCGGTCACGTC
GCTCACGGCAAGTCGACGGTCGTTAAGGCTATCTCCGAGGTCCAGACTGT
CCGTTTCAAGAACGAGTTGGAGCGAAACATTACGATCAAGCTGGGTTATG
CCAACGCAAAGATCTACAAGTGCGACAACCCCGAGTGCCCTAGGCCGACA
TGCTTTAAGAGCTTTAAGAGTGAGAAGGAAGTCGACCCGCCTTGTGAGAG
GGATGGCTGCGGTGGCCGCTACAGACTGTTGAGACATGTGTCTGGTAACA
CCCTTGAGCCCATCCTGAACTAATTTCGTCGACTGCCCCGGTCACGATAT
TCTGATGAGTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTCC
TCCTTATTGCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGCAC
TTGGCTGCCATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAAAA
CAAGGTGGACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTCGA
TCTTGAAGTTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTCCC
ATTTCTGCACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTGGT
TTCGCACATTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACATGA
TCGTCATTCGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGGAG
CTGAAGGGTGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGCA
GAACGACGAGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAACG
GCAAGATTCAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGCC
GAGCACAACGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCGG
TACTCGTGTAGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTCG
TCCTGGGTCACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAGTC
AACTACTTCTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCAA
GCAGGCCAAGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAACA
TCGGTTCTACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGCT
GCCAAGCTCAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGAT
TGCCATCAGTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGCCA
ACATTGTCGCATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGC
CTGGATCCCCCATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAA
GAGCCCCTCGACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGA
AGTTCCTCCTCCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATC
CGGAGACTCTGGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATT
GCGCGCCAAGCCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGG
CAAGTCGACGGTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCA
AGAACGAGTTGGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCA
AAGATCTACAAGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAA
GAGCTTTAAGAGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCT
GCGGTGGCCGCTACAGACTGTTGAGACATGTGTCTGGTAACACCCTTGAG
CCCATCCTGAACTAATTTCGTCGACTGCCCCGGTCACGATATTCTGATGA
GTACTATGTTGTCTGGTGCCGCCGTCATGGACGCTGCCCTCCTCCTTATT
GCCGGAAACGAAACTTGCCCTCAACCTCAGACTTCGGAGCACTTGGCTGC
CATCGAAATCATGAAGCTCAGCCACATCATCATTTTGCAAAACAAGGTGG
ACTTGATGAGAGAGGATGGTGCCCTGCAACATTACCAGTCGATCTTGAAG
TTCATCCGTGGTACTGTCGCCGATGGCTCTCCGATCATTCCCATTTCTGC
ACAGCTCAAGTACAACATCGATGCTGTCAACGAATACCTGGTTTCGCACA
TTCCCGTCCCCGTCCGCGATTTCACCGCTTCCCCCCACATGATCGTCATT
CGTTCCTTCGATGTGAACAAGCCTGGTGCCGAAATTGAGGAGCTGAAGGG
TGGTGTTGCCGGTGGTTCGATCTTGACTGGTGTTCTGAAGCAGAACGACG
AGATTGAGATTCGTCCCGGTCTGGTCACCAAGGACGAGAACGGCAAGATT
CAGTGCCGTCCCATCTTCTCTCGGGTCATGTCCCTCTTTGCCGAGCACAA
CGACCTCAAGTTTGCCGTCCCTGGTGGTTTGATTGGTGTCGGTACTCGTG
TAGACCCTACTCTGTGCCGTGCTGATCGTCTCGTTGGTTTCGTCCTGGGT
CACCGCGGACGCCTTCCCGCTATCTACACTGAGTTGGAAGTCAACTACTT
CTTGCTTCGTCGTCTGCTCGGTGTCAAGACTGCCGATGGCAAGCAGGCCA
AGGTTGCCAAGCTTACTAAGAACGAGGTTCTCATGGTCAACATCGGTTCT
ACGGCTACCGGAGCTAAGGTCGTGGGTGTCAAGGCTGATGCTGCCAAGCT
CAGCTTGACCAGCCCTGCCTGTACCGAGGTCGGAGAGAAGATTGCCATCA
GTCGGAGAATTGAGAAGCACTGGCGTCTGATCGGTTGGGCCAACATTGTC
GCATGGCTGCCAACGGCGACTTCTCTGACGACGAGTCCCAGCCTGGATCC
CCCATGCTCGATGCGAACGGTCACGATGACATCGAAGAGCAAGAGCCCCT
CGACCAGGAGGCCAAGCCTCTGAAGTCTGCGATGAAGAAGGAAGTTCCTC
CTCCCCAGCCCAAGCGGCCAGAGCTGCCCGAGCAGCCGAATCCGGAGACT
CTGGACCTGTCCACCCTGACTCCTTTGACCCCCGAAATTATTGCGCGCCA
AGCCACAATCAACATTGGCACCATCGGTCACGTCGCTCACGGCAAGTCGA
CGGTCGTTAAGGCTATCTCCGAGGTCCAGACTGTCCGTTTCAAGAACGAG
TTGGAGCGAAACATTACGATCAAGCTGGGTTATGCCAACGCAAAGATCTA
CAAGTGCGACAACCCCGAGTGCCCTAGGCCGACATGCTTTAAGAGCTTTA
AGAGTGAGAAGGAAGTCGACCCGCCTTGTGAGAGGGATGGCTGCGGTGGC
CGCTACAGACTGTTGAGACATGTGTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0000049tRNA binding
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GCD11ATCC10864_005386Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005386-T1ATCC10864_005386-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005386-T1.cdsATCC10864_005386-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005386-T1.exon3ATCC10864_005386-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005386-T1.exon2ATCC10864_005386-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005386-T1.exon1ATCC10864_005386-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR044127
InterProIPR009000
PFAMPF00009
InterProIPR004161
PFAMPF03144
InterProIPR000795
InterProIPR044128
PFAMPF09173
InterProIPR009001
InterProIPR027417
InterProIPR015256
Properties
Property NameValue
NoteBUSCO:EOG09261TPN
Producteukaryotic translation initiation factor 2 subunit gamma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:166818..168503 -
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