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ATCC10864_005394-T1, ATCC10864_005394-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005394-T1
Unique NameATCC10864_005394-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:189117..191061+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005394-T1 ID=ATCC10864_005394-T1|Name=ATCC10864_005394-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1945bp|location=Sequence derived from alignment at MCQH01000142:189117..191061+ (Aspergillus niger ATCC 10864)
ATGTCGTCTTTTTTCACCCTGCCCGCTTCGCAGCGGAAGCGCAAGAGAGA
AGACCGCGCTGGCGCCCCCGCGTCTAAGAAACGAGGTGTCGATGGAGACG
GAGATGCGGGCGCAAAGAGTGGCAAAAAGAAGACTAGGGAGCCGTCAGTT
TCGGGAAGCGACATTGATGAGGATGAGCTCAGTGGTGCCTCAGGGATATC
GGAGGAGGAAAGTGGCTCAGAATCCGACGAAGGAGAGACAGCCGGAGACC
GGAGATTGAAGCTTGCGGAGCGGTACCTGGAAAATGTCCGGGATGAAGTG
GAGGACTTTGGCTTTGACGCGGCCGAGATTGATCGTGACTTGATCGCAGA
GAGGCTGAAAGAGGATGTTGTAAGTACAAATCCTCCCATCCGGCTCCTGT
TCGGCTGGTCAGGCGTTTTACATGCAGAGCTGACGAGAGCTGCAGGATGA
ATTCAAAGGACGCGTTTATCGTCAGATTGCCTCCGATTTGGCCTTCTCGA
CGGCCTCCCATACCTTCTTCCGGGCAGATACGCAGTCAACTACGTCAATT
GCAGTCCATGCGCCGTATGTTTACACCGTTTCGAAGGACAAGACCTTGAT
TAAATGGGAACTCGCCACACCCACCTCCACGATTTCTACAACAAATGGAG
AGGAGTCCGAACGCCCTCCTCGCCCCCAGCGGAAGAAGCCAAAGCAGGTC
AGGTTTGTGCGGGGCTTGCGAAAGGTTGCGGAGACGGGAGAAGAGCATGG
ACATACCAAGAACATCTTGTCCGTCGCAGTGTCGCCGTCCGGAAAATTTG
TAGCCACGGGAGGAGAAGACCGGAAACTCATCGTCTGGGACGCGGAGACT
CTTACCCCCCTGAAGACCTTCACACAACATCGCGACGCTGTCAGTGGTCT
TGCCTTCGCTCGTCATATCTCTACCATGAGTTCTGGAGAGCAGCTCTTCT
CTGGCTCTTATGACCGGACCATCAAGACCTGGTCTCTGAGTACAGCCGGC
CATGCCTATGTTGAAACACTCTTCGGACATCAAGATCATGTTACGTCCGT
CGCCGCCATGGCCATCGATCAGTGTGTCAGTGTGGGAGCGCGCGATCGCA
CGGCCAGGTTGTGGAAGGTTATCGAGGAATCCCAACTGATCTTCCGTGGT
GGTTCTAAGAGCGCCTCCTATCAAGAGAACAACATTGACTGCGTATCGCC
GTTACCTCCTAACCACTTCGTTACTGGATCGGACTCAGGTTCCATCTCTC
TCTGGTCCATTCACAAGAAGAAGCCGCTTCACACGATCCCTCACGCACAC
GGCCTCGACCCCTTACCTCCACTGGACGAACTCTCCTCTGAAGTCAATCA
AGAAACCGCAGCACACAATTCCCGTCACCTCCGGCGCATGCCCCGCTGGA
TCACCGCTTTGACTACGCTTCCGGGCACAGACGTCGTACTTAGCGGCAGC
TGGGATGGCTTCATCCGGGCATGGAAGATCTCGGAAGACAAAAAGACCAT
TGTTCCTCTGGGCCCTATCGGAGCAGGATCCAGCATTCCGCTAACCCCCG
ACACCCCATCCGAGCAATTAAAGCAGACCCTTGCCTTCGACACACCGACG
AGCCCGGATCACATGGCAGTTGATGGTGCGCCGGCCCAGCAGACCGAGGA
GGAAGCAGAACCGCTGATCAAGGGTGTGATCAACGATATTGCTGTTTTCG
AGCGTCGCGCAGAAACCGCCAAACCAGGCCAAGCGCCAGCGGAACCCAAG
TCCAAGTCCAAGTCCAACACCAAGCCGTCTGCGCCCGAGCAACATGGGCT
CTGCATCGTAGCCGCTGTTGGCAAGGAACATCGGCTAGCAAGGTTCAAAT
GCTTCTCCAACAACTTCCATGACGGCCCCACCGCGGACGGTCGGAACGGT
GCCGTCGTGTTCGAAGTACCATTCATCTCCCAAAAATCGAAATGA
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Coding sequence (CDS) from alignment at MCQH01000142:189117..191061+

>ATCC10864_005394-T1 ID=ATCC10864_005394-T1|Name=ATCC10864_005394-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3738bp|location=Sequence derived from alignment at MCQH01000142:189117..191061+ (Aspergillus niger ATCC 10864)
ATGTCGTCTTTTTTCACCCTGCCCGCTTCGCAGCGGAAGCGCAAGAGAGA
AGACCGCGCTGGCGCCCCCGCGTCTAAGAAACGAGGTGTCGATGGAGACG
GAGATGCGGGCGCAAAGAGTGGCAAAAAGAAGACTAGGGAGCCGTCAGTT
TCGGGAAGCGACATTGATGAGGATGAGCTCAGTGGTGCCTCAGGGATATC
GGAGGAGGAAAGTGGCTCAGAATCCGACGAAGGAGAGACAGCCGGAGACC
GGAGATTGAAGCTTGCGGAGCGGTACCTGGAAAATGTCCGGGATGAAGTG
GAGGACTTTGGCTTTGACGCGGCCGAGATTGATCGTGACTTGATCGCAGA
GAGGCTGAAAGAGGATGTTGATGAATTCAAAGGACGCGTTTATCGTCAGA
TTGCCTCCGATTTGGCCTTCTCGACGGCCTCCCATACCTTCTTCCGGGCA
GATACGCAGTCAACTACGTCAATTGCAGTCCATGCGCCGTATGTTTACAC
CGTTTCGAAGGACAAGACCTTGATTAAATGGGAACTCGCCACACCCACCT
CCACGATTTCTACAACAAATGGAGAGGAGTCCGAACGCCCTCCTCGCCCC
CAGCGGAAGAAGCCAAAGCAGGTCAGGTTTGTGCGGGGCTTGCGAAAGGT
TGCGGAGACGGGAGAAGAGCATGGACATACCAAGAACATCTTGTCCGTCG
CAGTGTCGCCGTCCGGAAAATTTGTAGCCACGGGAGGAGAAGACCGGAAA
CTCATCGTCTGGGACGCGGAGACTCTTACCCCCCTGAAGACCTTCACACA
ACATCGCGACGCTGTCAGTGGTCTTGCCTTCGCTCGTCATATCTCTACCA
TGAGTTCTGGAGAGCAGCTCTTCTCTGGCTCTTATGACCGGACCATCAAG
ACCTGGTCTCTGAGTACAGCCGGCCATGCCTATGTTGAAACACTCTTCGG
ACATCAAGATCATGTTACGTCCGTCGCCGCCATGGCCATCGATCAGTGTG
TCAGTGTGGGAGCGCGCGATCGCACGGCCAGGTTGTGGAAGGTTATCGAG
GAATCCCAACTGATCTTCCGTGGTGGTTCTAAGAGCGCCTCCTATCAAGA
GAACAACATTGACTGCGTATCGCCGTTACCTCCTAACCACTTCGTTACTG
GATCGGACTCAGGTTCCATCTCTCTCTGGTCCATTCACAAGAAGAAGCCG
CTTCACACGATCCCTCACGCACACGGCCTCGACCCCTTACCTCCACTGGA
CGAACTCTCCTCTGAAGTCAATCAAGAAACCGCAGCACACAATTCCCGTC
ACCTCCGGCGCATGCCCCGCTGGATCACCGCTTTGACTACGCTTCCGGGC
ACAGACGTCGTACTTAGCGGCAGCTGGGATGGCTTCATCCGGGCATGGAA
GATCTCGGAAGACAAAAAGACCATTGTTCCTCTGGGCCCTATCGGAGCAG
GATCCAGCATTCCGCTAACCCCCGACACCCCATCCGAGCAATTAAAGCAG
ACCCTTGCCTTCGACACACCGACGAGCCCGGATCACATGGCAGTTGATGG
TGCGCCGGCCCAGCAGACCGAGGAGGAAGCAGAACCGCTGATCAAGGGTG
TGATCAACGATATTGCTGTTTTCGAGCGTCGCGCAGAAACCGCCAAACCA
GGCCAAGCGCCAGCGGAACCCAAGTCCAAGTCCAAGTCCAACACCAAGCC
GTCTGCGCCCGAGCAACATGGGCTCTGCATCGTAGCCGCTGTTGGCAAGG
AACATCGGCTAGCAAGGTTCAAATGCTTCTCCAACAACTTCCATGACGGC
CCCACCGCGGACGGTCGGAACGGTGCCGTCGTGTTCGAAGTACCATTCAT
CTCCCAAAAATCGAAATGAATGTCGTCTTTTTTCACCCTGCCCGCTTCGC
AGCGGAAGCGCAAGAGAGAAGACCGCGCTGGCGCCCCCGCGTCTAAGAAA
CGAGGTGTCGATGGAGACGGAGATGCGGGCGCAAAGAGTGGCAAAAAGAA
GACTAGGGAGCCGTCAGTTTCGGGAAGCGACATTGATGAGGATGAGCTCA
GTGGTGCCTCAGGGATATCGGAGGAGGAAAGTGGCTCAGAATCCGACGAA
GGAGAGACAGCCGGAGACCGGAGATTGAAGCTTGCGGAGCGGTACCTGGA
AAATGTCCGGGATGAAGTGGAGGACTTTGGCTTTGACGCGGCCGAGATTG
ATCGTGACTTGATCGCAGAGAGGCTGAAAGAGGATGTTGATGAATTCAAA
GGACGCGTTTATCGTCAGATTGCCTCCGATTTGGCCTTCTCGACGGCCTC
CCATACCTTCTTCCGGGCAGATACGCAGTCAACTACGTCAATTGCAGTCC
ATGCGCCGTATGTTTACACCGTTTCGAAGGACAAGACCTTGATTAAATGG
GAACTCGCCACACCCACCTCCACGATTTCTACAACAAATGGAGAGGAGTC
CGAACGCCCTCCTCGCCCCCAGCGGAAGAAGCCAAAGCAGGTCAGGTTTG
TGCGGGGCTTGCGAAAGGTTGCGGAGACGGGAGAAGAGCATGGACATACC
AAGAACATCTTGTCCGTCGCAGTGTCGCCGTCCGGAAAATTTGTAGCCAC
GGGAGGAGAAGACCGGAAACTCATCGTCTGGGACGCGGAGACTCTTACCC
CCCTGAAGACCTTCACACAACATCGCGACGCTGTCAGTGGTCTTGCCTTC
GCTCGTCATATCTCTACCATGAGTTCTGGAGAGCAGCTCTTCTCTGGCTC
TTATGACCGGACCATCAAGACCTGGTCTCTGAGTACAGCCGGCCATGCCT
ATGTTGAAACACTCTTCGGACATCAAGATCATGTTACGTCCGTCGCCGCC
ATGGCCATCGATCAGTGTGTCAGTGTGGGAGCGCGCGATCGCACGGCCAG
GTTGTGGAAGGTTATCGAGGAATCCCAACTGATCTTCCGTGGTGGTTCTA
AGAGCGCCTCCTATCAAGAGAACAACATTGACTGCGTATCGCCGTTACCT
CCTAACCACTTCGTTACTGGATCGGACTCAGGTTCCATCTCTCTCTGGTC
CATTCACAAGAAGAAGCCGCTTCACACGATCCCTCACGCACACGGCCTCG
ACCCCTTACCTCCACTGGACGAACTCTCCTCTGAAGTCAATCAAGAAACC
GCAGCACACAATTCCCGTCACCTCCGGCGCATGCCCCGCTGGATCACCGC
TTTGACTACGCTTCCGGGCACAGACGTCGTACTTAGCGGCAGCTGGGATG
GCTTCATCCGGGCATGGAAGATCTCGGAAGACAAAAAGACCATTGTTCCT
CTGGGCCCTATCGGAGCAGGATCCAGCATTCCGCTAACCCCCGACACCCC
ATCCGAGCAATTAAAGCAGACCCTTGCCTTCGACACACCGACGAGCCCGG
ATCACATGGCAGTTGATGGTGCGCCGGCCCAGCAGACCGAGGAGGAAGCA
GAACCGCTGATCAAGGGTGTGATCAACGATATTGCTGTTTTCGAGCGTCG
CGCAGAAACCGCCAAACCAGGCCAAGCGCCAGCGGAACCCAAGTCCAAGT
CCAAGTCCAACACCAAGCCGTCTGCGCCCGAGCAACATGGGCTCTGCATC
GTAGCCGCTGTTGGCAAGGAACATCGGCTAGCAAGGTTCAAATGCTTCTC
CAACAACTTCCATGACGGCCCCACCGCGGACGGTCGGAACGGTGCCGTCG
TGTTCGAAGTACCATTCATCTCCCAAAAATCGAAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0034511U3 snoRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005394ATCC10864_005394Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005394-T1.exon1ATCC10864_005394-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005394-T1.exon2ATCC10864_005394-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005394-T1.cdsATCC10864_005394-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005394-T1ATCC10864_005394-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR017986
InterProIPR019775
InterProIPR039241
InterProIPR001680
InterProIPR036322
InterProIPR020472
PFAMPF00400
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:189117..191061 +
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