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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000142:207591..208751+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005400-T1 ID=ATCC10864_005400-T1|Name=ATCC10864_005400-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1161bp|location=Sequence derived from alignment at MCQH01000142:207591..208751+ (Aspergillus niger ATCC 10864)
ATGGCGCAAGAACGTTCCGGAATCGTGGTCGGTCTGAACAAGGGCCACGT
ACGTTGTCCCCTGTCTTGAAGCTTGTTTTTAGTGTCCCGTTTTGTCTTTG
CGCGTGGAAAGATTTGGTCCGGTCGAGTCGTCGAGATTTCAAGCATGTGA
GCGGATTACGGAAAGGCACAACTTGGATGGGAAGAAATGAGGAAAATGCC
GGAAAATTGGGTGGAATTGAAGGATGATATGTCGGGAGAAGGGTCTTTTT
GTCTGCAATGCGGAGGAAGGATTCTTTTACAACTGCCCGACGATTCTTGC
TTGTTTCATTCGACATGGATGAGATTGGGAACTGGGAACTGAAATTGTCC
GACTCGGCTGGATCAAATCGGGACATGCTGCTTTGATATCTCCAATCATG
GAGAATTTCGCAATTGAAAGACAGAATGAAAATCAAGGACAACCGGACTA
ACATGTCTTTGATAACTTGCAGAAAACCACCCCCCTCAACACCCCCAAGA
CCCGGATCAGCCGTACCAAGGGCCAGTCTTCCCGCCGCACGGCCTTCGTT
CGTGAGATCGCCCGCGAGGTTGTCGGTCTTGCCCCCTATGAGCGTCGTAT
CATCGAACTCCTGAGAAACACTCAGGACAAGCGCGCTCGTAAGCTCGCCA
AGAAGAGAGTACGTTTGCCAGTGCCTTTACTATTCGGGGGAAGGATATGG
TTGGGAGGTTCGATTGTTTGCTTGTCCGCTTGCTCGCTCGTTCGGTTGTC
TGCTTGGCTCCGGTCCGTTGTCTATCTGCATCGTGTTCTTCGACATCACT
ACGATTACGCTTGATCGATAAGTACGACCTCATGAGCGTCATGACCGGTT
TATGTCTCAGAGAAGAGAACACAATCATTCGACAATCCATCCATCACCAA
AGGATCATGAATGCCATCCGGAGACGACAACTCAAACCAACGAAGCAAGC
AAAGTACCAACGACAGGACCATCGAGCACCCAAGCAAACAAGCAAGCAAT
TTGAACCACCGCCACATACCCCTCCGGCTCTTCACAACTCAAAACCACCT
GCTAACATATCTTTTTTCTCTACACAGCTCGGTACCTTCGGCCGTGGCAA
GAGAAAGGTCGAGGACATGCAGCGGGTCATCGCCGAGGCCCGCCGCACTG
GCGCTCACTAA back to topCoding sequence (CDS) from alignment at MCQH01000142:207591..208751+ >ATCC10864_005400-T1 ID=ATCC10864_005400-T1|Name=ATCC10864_005400-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=954bp|location=Sequence derived from alignment at MCQH01000142:207591..208751+ (Aspergillus niger ATCC 10864)
ATGGCGCAAGAACGTTCCGGAATCGTGGTCGGTCTGAACAAGGGCCACAA
AACCACCCCCCTCAACACCCCCAAGACCCGGATCAGCCGTACCAAGGGCC
AGTCTTCCCGCCGCACGGCCTTCGTTCGTGAGATCGCCCGCGAGGTTGTC
GGTCTTGCCCCCTATGAGCGTCGTATCATCGAACTCCTGAGAAACACTCA
GGACAAGCGCGCTCGTAAGCTCGCCAAGAAGAGACTCGGTACCTTCGGCC
GTGGCAAGAGAAAGGTCGAGGACATGCAGCGGGTCATCGCCGAGGCCCGC
CGCACTGGCGCTCACTAAATGGCGCAAGAACGTTCCGGAATCGTGGTCGG
TCTGAACAAGGGCCACAAAACCACCCCCCTCAACACCCCCAAGACCCGGA
TCAGCCGTACCAAGGGCCAGTCTTCCCGCCGCACGGCCTTCGTTCGTGAG
ATCGCCCGCGAGGTTGTCGGTCTTGCCCCCTATGAGCGTCGTATCATCGA
ACTCCTGAGAAACACTCAGGACAAGCGCGCTCGTAAGCTCGCCAAGAAGA
GACTCGGTACCTTCGGCCGTGGCAAGAGAAAGGTCGAGGACATGCAGCGG
GTCATCGCCGAGGCCCGCCGCACTGGCGCTCACTAAATGGCGCAAGAACG
TTCCGGAATCGTGGTCGGTCTGAACAAGGGCCACAAAACCACCCCCCTCA
ACACCCCCAAGACCCGGATCAGCCGTACCAAGGGCCAGTCTTCCCGCCGC
ACGGCCTTCGTTCGTGAGATCGCCCGCGAGGTTGTCGGTCTTGCCCCCTA
TGAGCGTCGTATCATCGAACTCCTGAGAAACACTCAGGACAAGCGCGCTC
GTAAGCTCGCCAAGAAGAGACTCGGTACCTTCGGCCGTGGCAAGAGAAAG
GTCGAGGACATGCAGCGGGTCATCGCCGAGGCCCGCCGCACTGGCGCTCA
CTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR000509 |
| InterPro | IPR038097 |
| PFAM | PF01158 |
Properties
| Property Name | Value |
|---|
| Product | 60S ribosomal protein L36 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000142 | supercontig | MCQH01000142:207591..208751 + |
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