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ATCC10864_005402-T1, ATCC10864_005402-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005402-T1
Unique NameATCC10864_005402-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:211466..212286+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005402-T1 ID=ATCC10864_005402-T1|Name=ATCC10864_005402-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=821bp|location=Sequence derived from alignment at MCQH01000142:211466..212286+ (Aspergillus niger ATCC 10864)
ATGGTATGTGTGCTGCGTGACCCTCACCTCTCCCTCGAACCAACCTAGCT
GACAGACCTCCTCCACAGAGTTCCCCTTTCGATATCAGTATGTACTAGCT
TCGCACAGCTTACCATCATGACTATTAACTCTCGGATGAACAGATGGCGG
TGCCTGCGTCGCCATGGTGGGCAAGGACTGCGTCGCAATCGCCTGTGATC
TCCGGTTGGGTATGCAGGCCCTGACTGTCTCCAACAACTTCCCCAAGATC
TTCAACTACGGCCCCTCCACCTTCCTCGGTCTGACCGGCCTGGCCACCGA
CGTGTCGACTGTGTCCGACCTTTTCCGGTACAAGGTCAACATGTACCGCC
TCCGCGAGGAACGGAACATTGCCCCCCAGACTCTCGCCAACCTGGTCAGT
TCGTCGTTATACGAGAAACGGTTCGGTCCTTTCTTCGTCAGCCCCGTCAT
TGCCGGAATCAACAGCACAACGGGGAAGCCTTTCATCTGCGGATTTGACA
GTATCGGGTGTATCGATTTTGCGAAGGACTTCATTGTTAGCGGAACTGCC
AGTGAGCAGCTGTTTGGTACCTGCGAGGGTCTGTGGGAGCCGGACTTGGT
AAGACTACTCCCTTTTGGAGAAAAAAAAATAACTGAAGATGGTGATGTAT
CGAGTCTGTACTAACATTCTGATGTAGTCCCCCGAGGACCTGTTCGAGAC
CATCTCGCAAGCCTTGCTCAGCGCCGTCGATCGAGACGCCCTTTCCGGTT
GGGGTGCACAGGTGTATATCATAGAAAAGGACAAGGTGACCAAGCGTCTA
CTGAAGGGAAGGCAAGATTAG
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Coding sequence (CDS) from alignment at MCQH01000142:211466..212286+

>ATCC10864_005402-T1 ID=ATCC10864_005402-T1|Name=ATCC10864_005402-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2484bp|location=Sequence derived from alignment at MCQH01000142:211466..212286+ (Aspergillus niger ATCC 10864)
ATGAGTTCCCCTTTCGATATCAATGGCGGTGCCTGCGTCGCCATGGTGGG
CAAGGACTGCGTCGCAATCGCCTGTGATCTCCGGTTGGGTATGCAGGCCC
TGACTGTCTCCAACAACTTCCCCAAGATCTTCAACTACGGCCCCTCCACC
TTCCTCGGTCTGACCGGCCTGGCCACCGACGTGTCGACTGTGTCCGACCT
TTTCCGGTACAAGGTCAACATGTACCGCCTCCGCGAGGAACGGAACATTG
CCCCCCAGACTCTCGCCAACCTGGTCAGTTCGTCGTTATACGAGAAACGG
TTCGGTCCTTTCTTCGTCAGCCCCGTCATTGCCGGAATCAACAGCACAAC
GGGGAAGCCTTTCATCTGCGGATTTGACAGTATCGGGTGTATCGATTTTG
CGAAGGACTTCATTGTTAGCGGAACTGCCAGTGAGCAGCTGTTTGGTACC
TGCGAGGGTCTGTGGGAGCCGGACTTGTCCCCCGAGGACCTGTTCGAGAC
CATCTCGCAAGCCTTGCTCAGCGCCGTCGATCGAGACGCCCTTTCCGGTT
GGGGTGCACAGGTGTATATCATAGAAAAGGACAAGGTGACCAAGCGTCTA
CTGAAGGGAAGGCAAGATTAGATGAGTTCCCCTTTCGATATCAATGGCGG
TGCCTGCGTCGCCATGGTGGGCAAGGACTGCGTCGCAATCGCCTGTGATC
TCCGGTTGGGTATGCAGGCCCTGACTGTCTCCAACAACTTCCCCAAGATC
TTCAACTACGGCCCCTCCACCTTCCTCGGTCTGACCGGCCTGGCCACCGA
CGTGTCGACTGTGTCCGACCTTTTCCGGTACAAGGTCAACATGTACCGCC
TCCGCGAGGAACGGAACATTGCCCCCCAGACTCTCGCCAACCTGGTCAGT
TCGTCGTTATACGAGAAACGGTTCGGTCCTTTCTTCGTCAGCCCCGTCAT
TGCCGGAATCAACAGCACAACGGGGAAGCCTTTCATCTGCGGATTTGACA
GTATCGGGTGTATCGATTTTGCGAAGGACTTCATTGTTAGCGGAACTGCC
AGTGAGCAGCTGTTTGGTACCTGCGAGGGTCTGTGGGAGCCGGACTTGTC
CCCCGAGGACCTGTTCGAGACCATCTCGCAAGCCTTGCTCAGCGCCGTCG
ATCGAGACGCCCTTTCCGGTTGGGGTGCACAGGTGTATATCATAGAAAAG
GACAAGGTGACCAAGCGTCTACTGAAGGGAAGGCAAGATTAGATGAGTTC
CCCTTTCGATATCAATGGCGGTGCCTGCGTCGCCATGGTGGGCAAGGACT
GCGTCGCAATCGCCTGTGATCTCCGGTTGGGTATGCAGGCCCTGACTGTC
TCCAACAACTTCCCCAAGATCTTCAACTACGGCCCCTCCACCTTCCTCGG
TCTGACCGGCCTGGCCACCGACGTGTCGACTGTGTCCGACCTTTTCCGGT
ACAAGGTCAACATGTACCGCCTCCGCGAGGAACGGAACATTGCCCCCCAG
ACTCTCGCCAACCTGGTCAGTTCGTCGTTATACGAGAAACGGTTCGGTCC
TTTCTTCGTCAGCCCCGTCATTGCCGGAATCAACAGCACAACGGGGAAGC
CTTTCATCTGCGGATTTGACAGTATCGGGTGTATCGATTTTGCGAAGGAC
TTCATTGTTAGCGGAACTGCCAGTGAGCAGCTGTTTGGTACCTGCGAGGG
TCTGTGGGAGCCGGACTTGTCCCCCGAGGACCTGTTCGAGACCATCTCGC
AAGCCTTGCTCAGCGCCGTCGATCGAGACGCCCTTTCCGGTTGGGGTGCA
CAGGTGTATATCATAGAAAAGGACAAGGTGACCAAGCGTCTACTGAAGGG
AAGGCAAGATTAGATGAGTTCCCCTTTCGATATCAATGGCGGTGCCTGCG
TCGCCATGGTGGGCAAGGACTGCGTCGCAATCGCCTGTGATCTCCGGTTG
GGTATGCAGGCCCTGACTGTCTCCAACAACTTCCCCAAGATCTTCAACTA
CGGCCCCTCCACCTTCCTCGGTCTGACCGGCCTGGCCACCGACGTGTCGA
CTGTGTCCGACCTTTTCCGGTACAAGGTCAACATGTACCGCCTCCGCGAG
GAACGGAACATTGCCCCCCAGACTCTCGCCAACCTGGTCAGTTCGTCGTT
ATACGAGAAACGGTTCGGTCCTTTCTTCGTCAGCCCCGTCATTGCCGGAA
TCAACAGCACAACGGGGAAGCCTTTCATCTGCGGATTTGACAGTATCGGG
TGTATCGATTTTGCGAAGGACTTCATTGTTAGCGGAACTGCCAGTGAGCA
GCTGTTTGGTACCTGCGAGGGTCTGTGGGAGCCGGACTTGTCCCCCGAGG
ACCTGTTCGAGACCATCTCGCAAGCCTTGCTCAGCGCCGTCGATCGAGAC
GCCCTTTCCGGTTGGGGTGCACAGGTGTATATCATAGAAAAGGACAAGGT
GACCAAGCGTCTACTGAAGGGAAGGCAAGATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0019774proteasome core complex, beta-subunit complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PUP3ATCC10864_005402Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005402-T1.exon1ATCC10864_005402-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005402-T1.exon2ATCC10864_005402-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005402-T1.exon3ATCC10864_005402-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005402-T1.exon4ATCC10864_005402-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005402-T1.cdsATCC10864_005402-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005402-T1ATCC10864_005402-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR033811
InterProIPR016050
InterProIPR001353
InterProIPR023333
PFAMPF00227
InterProIPR029055
Properties
Property NameValue
NoteMEROPS:MER0001710
NoteBUSCO:EOG09264G4X
Productproteasome core particle subunit beta 3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:211466..212286 +
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