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ATCC10864_005407-T1, ATCC10864_005407-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005407-T1
Unique NameATCC10864_005407-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:221726..223642+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005407-T1 ID=ATCC10864_005407-T1|Name=ATCC10864_005407-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1917bp|location=Sequence derived from alignment at MCQH01000142:221726..223642+ (Aspergillus niger ATCC 10864)
ATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCA
GCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGGTGGGC
TTCTCTTAGTTCCCTTACTCACCTAAAATTAAATCTGACACATTCCCATC
GCTAGAGGGTATCACCCGTGAGCTCTATGCTCTGCTAGGCGAACGAGCGC
CTCCGATCGCCATCAACGAGAACCGATACAAGGGACGTCCGAAATGGACG
AGCAAAAAGCGCGTACAGCCATGGTACGCACACATCACCATATCAACTGC
TCTCCGATATCAAACACTGACTCCATCAGGCGCATGACCCCCTTCATAAA
CAGCGCCCGCTCCGATGGCCTCGTTCTCCGCCACTGGCAACGCCAGCATG
AATCCGCCAAGGTCCCCGCGCTGGAGGGCTCCGAGATGGACGTGGACGAG
AAAGAGGACAACGCCGATGCCTCAACCTCCGATAACGTGCCGCAGCAAGA
CTCCCTATTCGCCAAATACAACATCAAAGCCCGCGTACCCAACCGCTACA
CAGACGAGGAATACAATCGCCATCTCAAGAACGACGACTGGACGCGCCAG
GAAACCGACTACCTCATGGACCTAGTCGAAGAATACGATCTCCGCTGGGT
CGTAATCGCCGATCGCTACGACTATCAACCGCACTCCGTCGATGGCGACA
GCAACAACGCCAGCGCCCTCGTCCCCGCAAAGCAATACCGAACCATGGAG
CAGATGAAATCGCGCTACTACTTCATCGCCGCGAGCATGCTCGCGCTCGA
GCACCCGCCCTCCGAGATGTCGGAAGCCGAATTCGAACTGCACGAAAAGA
TGCTCAAATTCGACGCCGACCGTGAACGCTCCCGCAAAGAACTCGCCGCC
CTCCAACTCAACCGCACAGCCGACGAAGTCCGCGAAGAAAGCGTCCTCCT
CGAAGAACTCAAACGCATCACCGCCAACGAGCAAGATTTCATCACGGAAC
GTCGCGAACTCTACTCCCGCCTTGAAGTCCCTATCAGCGTCGGCAACACA
ACCATGTACCAATCCAGCCAAGGCCTCTCGCAACTCCTCCAAACCCTCCT
CCAAGCCGACAAGAGCAAGAAACGCCGCTCCATCCTGGGCCCCGAAGGCG
GCGCCGCTCCCAGCCCCGCCGGCGCAACCCCGGCCCCCAACGCCCCCAGC
AGCGCCCGCGACAGCCGCGCCGACACCCCCAACGCGACGCCCGCCGCCGC
CCCAACCAACAAAAAGGCCGCCGCGGCAGCCGCAGCCGCAGCCGCAGCAG
CGAACAAAGAAGCGCAACAACAAGCCGTTCGGACCCTCACACCCGCCGAA
GAAGCCAAATACGGCGTGCAGCACCACGACCGACTGGCGCCGGGCGTGCA
ATTCCGCAGTGACCGCGCGCAGAAGCTCACACAGGCGAAATCGAATGTGC
AGACGCAGAAACTCGCTGCTGCGCTGGCGGAACTGGAGGTGCCGCTGCGG
CTTGTCATGCCGACGGAGCGTGTCTGCAAGGATTTTGAGAAGCTGATTCA
TTCGGTGAATCTGCTGCTGGAGGCGCGGAAGGTGTCGGAGAAGGTGGAGA
GTGAGATTCGGGTTTTGGAGGCTGCGAAGGAGGAACGTGAGAAGAAGGCG
AAGGAGGCGCTAGAGAAGGATAGTAAGCCTGAGGTCAAATCGGAGCAGCA
GGAGGATCAGCCACTTCCTGCGGCGGCGGCGGAGGAGGAGGAGGAGGCTG
CGGGTGCTGGGGATGCGGAGGGGCAGGAGAAGGGTGCAACAGATAAATCG
GGAGAGAAGGCAGAAGGTGGTGCTGCTGGTGAAGAGGGAGATGTGACTTC
GCATAAACGCTCTGCTAGTGTTCTGAGCAATGCTAGTGATAAGAGTACGA
AGCGGCAAAGGAAGTAA
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Coding sequence (CDS) from alignment at MCQH01000142:221726..223642+

>ATCC10864_005407-T1 ID=ATCC10864_005407-T1|Name=ATCC10864_005407-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5400bp|location=Sequence derived from alignment at MCQH01000142:221726..223642+ (Aspergillus niger ATCC 10864)
ATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCA
GCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGAGGGTA
TCACCCGTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCCTCCGATCGCC
ATCAACGAGAACCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCG
CGTACAGCCATGGCGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATG
GCCTCGTTCTCCGCCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCC
GCGCTGGAGGGCTCCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGA
TGCCTCAACCTCCGATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAAT
ACAACATCAAAGCCCGCGTACCCAACCGCTACACAGACGAGGAATACAAT
CGCCATCTCAAGAACGACGACTGGACGCGCCAGGAAACCGACTACCTCAT
GGACCTAGTCGAAGAATACGATCTCCGCTGGGTCGTAATCGCCGATCGCT
ACGACTATCAACCGCACTCCGTCGATGGCGACAGCAACAACGCCAGCGCC
CTCGTCCCCGCAAAGCAATACCGAACCATGGAGCAGATGAAATCGCGCTA
CTACTTCATCGCCGCGAGCATGCTCGCGCTCGAGCACCCGCCCTCCGAGA
TGTCGGAAGCCGAATTCGAACTGCACGAAAAGATGCTCAAATTCGACGCC
GACCGTGAACGCTCCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCAC
AGCCGACGAAGTCCGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCA
TCACCGCCAACGAGCAAGATTTCATCACGGAACGTCGCGAACTCTACTCC
CGCCTTGAAGTCCCTATCAGCGTCGGCAACACAACCATGTACCAATCCAG
CCAAGGCCTCTCGCAACTCCTCCAAACCCTCCTCCAAGCCGACAAGAGCA
AGAAACGCCGCTCCATCCTGGGCCCCGAAGGCGGCGCCGCTCCCAGCCCC
GCCGGCGCAACCCCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCG
CGCCGACACCCCCAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGG
CCGCCGCGGCAGCCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAA
CAACAAGCCGTTCGGACCCTCACACCCGCCGAAGAAGCCAAATACGGCGT
GCAGCACCACGACCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCG
CGCAGAAGCTCACACAGGCGAAATCGAATGTGCAGACGCAGAAACTCGCT
GCTGCGCTGGCGGAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGA
GCGTGTCTGCAAGGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGC
TGGAGGCGCGGAAGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTG
GAGGCTGCGAAGGAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTAGAGAA
GGATAGTAAGCCTGAGGTCAAATCGGAGCAGCAGGAGGATCAGCCACTTC
CTGCGGCGGCGGCGGAGGAGGAGGAGGAGGCTGCGGGTGCTGGGGATGCG
GAGGGGCAGGAGAAGGGTGCAACAGATAAATCGGGAGAGAAGGCAGAAGG
TGGTGCTGCTGGTGAAGAGGGAGATGTGACTTCGCATAAACGCTCTGCTA
GTGTTCTGAGCAATGCTAGTGATAAGAGTACGAAGCGGCAAAGGAAGTAA
ATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCA
GCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGAGGGTA
TCACCCGTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCCTCCGATCGCC
ATCAACGAGAACCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCG
CGTACAGCCATGGCGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATG
GCCTCGTTCTCCGCCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCC
GCGCTGGAGGGCTCCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGA
TGCCTCAACCTCCGATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAAT
ACAACATCAAAGCCCGCGTACCCAACCGCTACACAGACGAGGAATACAAT
CGCCATCTCAAGAACGACGACTGGACGCGCCAGGAAACCGACTACCTCAT
GGACCTAGTCGAAGAATACGATCTCCGCTGGGTCGTAATCGCCGATCGCT
ACGACTATCAACCGCACTCCGTCGATGGCGACAGCAACAACGCCAGCGCC
CTCGTCCCCGCAAAGCAATACCGAACCATGGAGCAGATGAAATCGCGCTA
CTACTTCATCGCCGCGAGCATGCTCGCGCTCGAGCACCCGCCCTCCGAGA
TGTCGGAAGCCGAATTCGAACTGCACGAAAAGATGCTCAAATTCGACGCC
GACCGTGAACGCTCCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCAC
AGCCGACGAAGTCCGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCA
TCACCGCCAACGAGCAAGATTTCATCACGGAACGTCGCGAACTCTACTCC
CGCCTTGAAGTCCCTATCAGCGTCGGCAACACAACCATGTACCAATCCAG
CCAAGGCCTCTCGCAACTCCTCCAAACCCTCCTCCAAGCCGACAAGAGCA
AGAAACGCCGCTCCATCCTGGGCCCCGAAGGCGGCGCCGCTCCCAGCCCC
GCCGGCGCAACCCCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCG
CGCCGACACCCCCAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGG
CCGCCGCGGCAGCCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAA
CAACAAGCCGTTCGGACCCTCACACCCGCCGAAGAAGCCAAATACGGCGT
GCAGCACCACGACCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCG
CGCAGAAGCTCACACAGGCGAAATCGAATGTGCAGACGCAGAAACTCGCT
GCTGCGCTGGCGGAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGA
GCGTGTCTGCAAGGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGC
TGGAGGCGCGGAAGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTG
GAGGCTGCGAAGGAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTAGAGAA
GGATAGTAAGCCTGAGGTCAAATCGGAGCAGCAGGAGGATCAGCCACTTC
CTGCGGCGGCGGCGGAGGAGGAGGAGGAGGCTGCGGGTGCTGGGGATGCG
GAGGGGCAGGAGAAGGGTGCAACAGATAAATCGGGAGAGAAGGCAGAAGG
TGGTGCTGCTGGTGAAGAGGGAGATGTGACTTCGCATAAACGCTCTGCTA
GTGTTCTGAGCAATGCTAGTGATAAGAGTACGAAGCGGCAAAGGAAGTAA
ATGGCCGCCGCCGATGTTCGCGACATGCTGGATCTGCCCGCGGAGGGCCA
GCCCCGACCTCATAAGAAACAGAAGGTCGTCGAGAAGCGTCCAGAGGGTA
TCACCCGTGAGCTCTATGCTCTGCTAGGCGAACGAGCGCCTCCGATCGCC
ATCAACGAGAACCGATACAAGGGACGTCCGAAATGGACGAGCAAAAAGCG
CGTACAGCCATGGCGCATGACCCCCTTCATAAACAGCGCCCGCTCCGATG
GCCTCGTTCTCCGCCACTGGCAACGCCAGCATGAATCCGCCAAGGTCCCC
GCGCTGGAGGGCTCCGAGATGGACGTGGACGAGAAAGAGGACAACGCCGA
TGCCTCAACCTCCGATAACGTGCCGCAGCAAGACTCCCTATTCGCCAAAT
ACAACATCAAAGCCCGCGTACCCAACCGCTACACAGACGAGGAATACAAT
CGCCATCTCAAGAACGACGACTGGACGCGCCAGGAAACCGACTACCTCAT
GGACCTAGTCGAAGAATACGATCTCCGCTGGGTCGTAATCGCCGATCGCT
ACGACTATCAACCGCACTCCGTCGATGGCGACAGCAACAACGCCAGCGCC
CTCGTCCCCGCAAAGCAATACCGAACCATGGAGCAGATGAAATCGCGCTA
CTACTTCATCGCCGCGAGCATGCTCGCGCTCGAGCACCCGCCCTCCGAGA
TGTCGGAAGCCGAATTCGAACTGCACGAAAAGATGCTCAAATTCGACGCC
GACCGTGAACGCTCCCGCAAAGAACTCGCCGCCCTCCAACTCAACCGCAC
AGCCGACGAAGTCCGCGAAGAAAGCGTCCTCCTCGAAGAACTCAAACGCA
TCACCGCCAACGAGCAAGATTTCATCACGGAACGTCGCGAACTCTACTCC
CGCCTTGAAGTCCCTATCAGCGTCGGCAACACAACCATGTACCAATCCAG
CCAAGGCCTCTCGCAACTCCTCCAAACCCTCCTCCAAGCCGACAAGAGCA
AGAAACGCCGCTCCATCCTGGGCCCCGAAGGCGGCGCCGCTCCCAGCCCC
GCCGGCGCAACCCCGGCCCCCAACGCCCCCAGCAGCGCCCGCGACAGCCG
CGCCGACACCCCCAACGCGACGCCCGCCGCCGCCCCAACCAACAAAAAGG
CCGCCGCGGCAGCCGCAGCCGCAGCCGCAGCAGCGAACAAAGAAGCGCAA
CAACAAGCCGTTCGGACCCTCACACCCGCCGAAGAAGCCAAATACGGCGT
GCAGCACCACGACCGACTGGCGCCGGGCGTGCAATTCCGCAGTGACCGCG
CGCAGAAGCTCACACAGGCGAAATCGAATGTGCAGACGCAGAAACTCGCT
GCTGCGCTGGCGGAACTGGAGGTGCCGCTGCGGCTTGTCATGCCGACGGA
GCGTGTCTGCAAGGATTTTGAGAAGCTGATTCATTCGGTGAATCTGCTGC
TGGAGGCGCGGAAGGTGTCGGAGAAGGTGGAGAGTGAGATTCGGGTTTTG
GAGGCTGCGAAGGAGGAACGTGAGAAGAAGGCGAAGGAGGCGCTAGAGAA
GGATAGTAAGCCTGAGGTCAAATCGGAGCAGCAGGAGGATCAGCCACTTC
CTGCGGCGGCGGCGGAGGAGGAGGAGGAGGCTGCGGGTGCTGGGGATGCG
GAGGGGCAGGAGAAGGGTGCAACAGATAAATCGGGAGAGAAGGCAGAAGG
TGGTGCTGCTGGTGAAGAGGGAGATGTGACTTCGCATAAACGCTCTGCTA
GTGTTCTGAGCAATGCTAGTGATAAGAGTACGAAGCGGCAAAGGAAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
GO:0006281DNA repair
GO:0045892negative regulation of transcription, DNA-templated
GO:0043967histone H4 acetylation
GO:0043968histone H2A acetylation
Vocabulary: Cellular Component
TermDefinition
GO:0035267NuA4 histone acetyltransferase complex
GO:0005634nucleus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SWC4ATCC10864_005407Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005407-T1.exon1ATCC10864_005407-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005407-T1.exon2ATCC10864_005407-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005407-T1.exon3ATCC10864_005407-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005407-T1.cdsATCC10864_005407-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005407-T1ATCC10864_005407-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR027109
PFAMPF05499
PFAMPF16282
InterProIPR017877
InterProIPR008468
InterProIPR032563
Properties
Property NameValue
NoteBUSCO:EOG09262OLP
Productswr complex subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:221726..223642 +
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