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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000142:260176..261053- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005419-T1 ID=ATCC10864_005419-T1|Name=ATCC10864_005419-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=878bp|location=Sequence derived from alignment at MCQH01000142:260176..261053- (Aspergillus niger ATCC 10864)
ATGGGCAAATATAACCTCACGGCCCTCCGGGTTCGCCAAATCGCTGTGGC
ACAGCAATCCGCCGGCAAACTTCGTCAAACACCCAAATGGCTTGATATAA
TGCACGATGTCCCCCCCACTGAGGTCCTGGTGCGGAACCGACCTCAACAA
CACCAATTGGTTCGCCAGCGCCTGAAGACTGTTCCTGGCGCATCGAGGCC
GCAGGCCGTCTTCGAAGTCCAGGAGAAACGCATCAAGCCGAAGAAGGCAA
GCCGCATGTTCCAGCCTGTCGAAATCAAATACGAGGAGGATCAACTGCGC
AAGGAATTTTTCCGCGACCATCCTTGGGAGCTTGCCCGACCCCGTGTGCT
TGTCGAAAAGTCCGGCAAGGACTTTGAGAGATATAACTGGAGCCGGCTCC
AGCAGCGGGGAAAGCACTTGGATGGTGAGAGGTATGTCTAGTGTCCTCGA
TCTGTAGGCGGGAGGATCTCGCCAATAATTAGATATTTGATGCTAACTCC
CCCGGTTTCCGGTGAAATAGCGTTGTTCAGCGACAGCTTTGGCTCCTTAA
TAATGTCCCCGATATGACCAAGAGCGCCGCTTACGATATTGCACGCCGCG
AGTTCTACCGCCTCCGTCTACAGGAAGACATTGAACGACGTGTTGCTGCT
GAGGAAGCCGAAGCTACTGGTGCTGTGTTCGGACCGACACGTCTACAGAT
CGGTATGGACCTCGAGAACAAGGAGTATGAGCGTTGGAAGGAATGGGCCA
AGTTGCAGGCCCAGCTTTCGGACCAGAGAATGGCTGCGTTCCTTGGGGCT
CCGGAAGTCCAAGCTGCTGAGGAGCAAGAGACGAGCTTGGATGATGACGC
CACGGAAAAGGTTGCGGTAGCAGCCTGA back to topCoding sequence (CDS) from alignment at MCQH01000142:260176..261053- >ATCC10864_005419-T1 ID=ATCC10864_005419-T1|Name=ATCC10864_005419-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1578bp|location=Sequence derived from alignment at MCQH01000142:260176..261053- (Aspergillus niger ATCC 10864)
CGTTGTTCAGCGACAGCTTTGGCTCCTTAATAATGTCCCCGATATGACCA
AGAGCGCCGCTTACGATATTGCACGCCGCGAGTTCTACCGCCTCCGTCTA
CAGGAAGACATTGAACGACGTGTTGCTGCTGAGGAAGCCGAAGCTACTGG
TGCTGTGTTCGGACCGACACGTCTACAGATCGGTATGGACCTCGAGAACA
AGGAGTATGAGCGTTGGAAGGAATGGGCCAAGTTGCAGGCCCAGCTTTCG
GACCAGAGAATGGCTGCGTTCCTTGGGGCTCCGGAAGTCCAAGCTGCTGA
GGAGCAAGAGACGAGCTTGGATGATGACGCCACGGAAAAGGTTGCGGTAG
CAGCCTGAATGGGCAAATATAACCTCACGGCCCTCCGGGTTCGCCAAATC
GCTGTGGCACAGCAATCCGCCGGCAAACTTCGTCAAACACCCAAATGGCT
TGATATAATGCACGATGTCCCCCCCACTGAGGTCCTGGTGCGGAACCGAC
CTCAACAACACCAATTGGTTCGCCAGCGCCTGAAGACTGTTCCTGGCGCA
TCGAGGCCGCAGGCCGTCTTCGAAGTCCAGGAGAAACGCATCAAGCCGAA
GAAGGCAAGCCGCATGTTCCAGCCTGTCGAAATCAAATACGAGGAGGATC
AACTGCGCAAGGAATTTTTCCGCGACCATCCTTGGGAGCTTGCCCGACCC
CGTGTGCTTGTCGAAAAGTCCGGCAAGGACTTTGAGAGATATAACTGGAG
CCGGCTCCAGCAGCGGGGAAAGCACTTGGATGGTGAGAGCGTTGTTCAGC
GACAGCTTTGGCTCCTTAATAATGTCCCCGATATGACCAAGAGCGCCGCT
TACGATATTGCACGCCGCGAGTTCTACCGCCTCCGTCTACAGGAAGACAT
TGAACGACGTGTTGCTGCTGAGGAAGCCGAAGCTACTGGTGCTGTGTTCG
GACCGACACGTCTACAGATCGGTATGGACCTCGAGAACAAGGAGTATGAG
CGTTGGAAGGAATGGGCCAAGTTGCAGGCCCAGCTTTCGGACCAGAGAAT
GGCTGCGTTCCTTGGGGCTCCGGAAGTCCAAGCTGCTGAGGAGCAAGAGA
CGAGCTTGGATGATGACGCCACGGAAAAGGTTGCGGTAGCAGCCTGAATG
GGCAAATATAACCTCACGGCCCTCCGGGTTCGCCAAATCGCTGTGGCACA
GCAATCCGCCGGCAAACTTCGTCAAACACCCAAATGGCTTGATATAATGC
ACGATGTCCCCCCCACTGAGGTCCTGGTGCGGAACCGACCTCAACAACAC
CAATTGGTTCGCCAGCGCCTGAAGACTGTTCCTGGCGCATCGAGGCCGCA
GGCCGTCTTCGAAGTCCAGGAGAAACGCATCAAGCCGAAGAAGGCAAGCC
GCATGTTCCAGCCTGTCGAAATCAAATACGAGGAGGATCAACTGCGCAAG
GAATTTTTCCGCGACCATCCTTGGGAGCTTGCCCGACCCCGTGTGCTTGT
CGAAAAGTCCGGCAAGGACTTTGAGAGATATAACTGGAGCCGGCTCCAGC
AGCGGGGAAAGCACTTGGATGGTGAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005763 | mitochondrial small ribosomal subunit |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264X41 |
| Product | mitochondrial ribosomal small subunit component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000142 | supercontig | MCQH01000142:260176..261053 - |
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