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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000142:342372..344229+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_005446-T1 ID=ATCC10864_005446-T1|Name=ATCC10864_005446-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1858bp|location=Sequence derived from alignment at MCQH01000142:342372..344229+ (Aspergillus niger ATCC 10864)
ATGGCTTCTGATTCCACCCCCGCAAAGCCAGGGGGCACCTTGTCACTCTA
CGCCAATCTGCTAGATCCCTCTGCCGATAACTCTCCCGGAACGATCGCTC
GCGCCCCGGTCGTCTTCAAGCAGAGTAGTACTACCGAGAATAATGACTCT
CAGTCCGATGAATCCGCTGCCAAAAAGCAGCAGCTCAGTGCTGGTAGACT
CATACCCTCTTCTGTTAACTGAGCCATGTTATCTATATTTGAACGATCTG
ATTGCTCACTTGTCCGCCCGGTTGCTCTCGTCGGTGGTTTCCAGCTTCTC
TCAGATTTCAGCCTACCAAGAGGCCCCAGCTAGCAGCTCAGAAACCGAAA
CCGAAGCCGACGTTACCAAAGGCTGCTGCTGCACCAGCGGCTCCGGCAGC
AGCCCCTGTCAAGACTACTCTCGCAGATTGGGCAGCCACCGAGGATGACG
ATGTCAATGGATTCTATGCCGGTCCGAAGAGGCAACGAGGTGGGCGCAAG
AAGCGCAAGAAGAATCGCGAGGCGCAGGAGTTCATACAAAACTGGGACGA
CATCTATGACCCGTCGCGACCGAACAACTACGAAGAGTACAAGCACAGTG
ACGAACAAATAGCTGAGGTGAGGGAGTGGAAAGACCGTCTTTACGCACAC
CGCATGGCCAGATCGCCCAGCAGGGACTCACAAAGTGACGATGATTATGC
ACGACCCATGAACCGTAAGCTATATATTCTCAAGAGCGAGATGTCTATTT
GCTCAAAAAACGTTCTAGGTAAATTTGCTCCTCCGAGCAGCTTCGCACCG
CCTCCCAATCTCAACGATATGCCGCCCAGGCCACCCATCGAATCACCTCC
AGAACGAACAAGCGAAACCCCAGGCGATATTTCAATGTCGGATGCTCCTC
CGCCGCCACCCCCGACCGATGAGCCGCCCGCACAAGTTCCGGATGACCCT
ACAGGCGAAGATGCTTACTTACGGCGCCTCCAAATGTCGATGGGCAACCA
GCCTACAGCAGCTCCTGCTGCGCCACCACCACCACCCAGGCCCCTAGAAT
CCCTACAACCAGCTTCCGCAACTATATCCCGCGCGCCGGTTCGCTACACG
CTACCTCCTCCACCCGAGGACATACCTGCGTCAGAGGCGGAACTTGAAGA
AGTCTTCGCAAAGGAACAGCCAGTGGAAGATGAACCGGAAGATGAGGGCC
AGCGTTCGCTGCGGCCAGGACAGAAAGGGTTTGCTGAGCGACTCATGGCC
AAGTATGGCTGGACCAAGGGCTCTGGCCTGGGTGCCACGGGCTCCGGCAT
TGTCAAGCCACTGCAAGTCAAAGTTGAGAAACAGAAGAAACGACCCGACT
CTGAAGGTGGAGGCTTTGCGACGCCCGCTGGTCGGGGCAAGATCATTGGT
GGCGCAAGAAAGAATGAAGAGGAGGGGAAGTTTGGTCCAATGAGTGAAGT
CATTATATTGAAGGGTATGCTTGATGGAATGGACTTGGATGCTGAGTTGG
CTGGGGACGGCGAGGGCGGTGGTCTCATGCAAGAAATTGGCGAAGAGTGT
TCTGAGAAGGTAGGTGGATGTTTACTCACTACATGGCATAAACTAATGCG
GTACAGTACGGTCGTGTTGAACGTGTCTTCATACCCCGCGACTCGGCACC
TCCAGTGCCAGTTTTTGTCAAGTTTACCAATCAGCTCTCGGCTCTACGTG
TAAGTGCTGCATCCATGTCCCATGCCCATTTCAAGGATCCGGCTAAGAAC
TATGCATAGGCTGTCAACGCTCTTGAGGGTCGGATCTTCAGTGGAAATGC
TATCACTGCCCGGTTCTACGATGTACATACTTTCGAACAGGGGATATACG
ATAGCTAA back to topCoding sequence (CDS) from alignment at MCQH01000142:342372..344229+ >ATCC10864_005446-T1 ID=ATCC10864_005446-T1|Name=ATCC10864_005446-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7980bp|location=Sequence derived from alignment at MCQH01000142:342372..344229+ (Aspergillus niger ATCC 10864)
ATGGCTTCTGATTCCACCCCCGCAAAGCCAGGGGGCACCTTGTCACTCTA
CGCCAATCTGCTAGATCCCTCTGCCGATAACTCTCCCGGAACGATCGCTC
GCGCCCCGGTCGTCTTCAAGCAGAGTAGTACTACCGAGAATAATGACTCT
CAGTCCGATGAATCCGCTGCCAAAAAGCAGCAGCTCAGTGCTGCTTCTCT
CAGATTTCAGCCTACCAAGAGGCCCCAGCTAGCAGCTCAGAAACCGAAAC
CGAAGCCGACGTTACCAAAGGCTGCTGCTGCACCAGCGGCTCCGGCAGCA
GCCCCTGTCAAGACTACTCTCGCAGATTGGGCAGCCACCGAGGATGACGA
TGTCAATGGATTCTATGCCGGTCCGAAGAGGCAACGAGGTGGGCGCAAGA
AGCGCAAGAAGAATCGCGAGGCGCAGGAGTTCATACAAAACTGGGACGAC
ATCTATGACCCGTCGCGACCGAACAACTACGAAGAGTACAAGCACAGTGA
CGAACAAATAGCTGAGGTGAGGGAGTGGAAAGACCGTCTTTACGCACACC
GCATGGCCAGATCGCCCAGCAGGGACTCACAAAGTGACGATGATTATGCA
CGACCCATGAACCGTAAATTTGCTCCTCCGAGCAGCTTCGCACCGCCTCC
CAATCTCAACGATATGCCGCCCAGGCCACCCATCGAATCACCTCCAGAAC
GAACAAGCGAAACCCCAGGCGATATTTCAATGTCGGATGCTCCTCCGCCG
CCACCCCCGACCGATGAGCCGCCCGCACAAGTTCCGGATGACCCTACAGG
CGAAGATGCTTACTTACGGCGCCTCCAAATGTCGATGGGCAACCAGCCTA
CAGCAGCTCCTGCTGCGCCACCACCACCACCCAGGCCCCTAGAATCCCTA
CAACCAGCTTCCGCAACTATATCCCGCGCGCCGGTTCGCTACACGCTACC
TCCTCCACCCGAGGACATACCTGCGTCAGAGGCGGAACTTGAAGAAGTCT
TCGCAAAGGAACAGCCAGTGGAAGATGAACCGGAAGATGAGGGCCAGCGT
TCGCTGCGGCCAGGACAGAAAGGGTTTGCTGAGCGACTCATGGCCAAGTA
TGGCTGGACCAAGGGCTCTGGCCTGGGTGCCACGGGCTCCGGCATTGTCA
AGCCACTGCAAGTCAAAGTTGAGAAACAGAAGAAACGACCCGACTCTGAA
GGTGGAGGCTTTGCGACGCCCGCTGGTCGGGGCAAGATCATTGGTGGCGC
AAGAAAGAATGAAGAGGAGGGGAAGTTTGGTCCAATGAGTGAAGTCATTA
TATTGAAGGGTATGCTTGATGGAATGGACTTGGATGCTGAGTTGGCTGGG
GACGGCGAGGGCGGTGGTCTCATGCAAGAAATTGGCGAAGAGTGTTCTGA
GAAGTACGGTCGTGTTGAACGTGTCTTCATACCCCGCGACTCGGCACCTC
CAGTGCCAGTTTTTGTCAAGTTTACCAATCAGCTCTCGGCTCTACGTGCT
GTCAACGCTCTTGAGGGTCGGATCTTCAGTGGAAATGCTATCACTGCCCG
GTTCTACGATGTACATACTTTCGAACAGGGGATATACGATAGCTAAATGG
CTTCTGATTCCACCCCCGCAAAGCCAGGGGGCACCTTGTCACTCTACGCC
AATCTGCTAGATCCCTCTGCCGATAACTCTCCCGGAACGATCGCTCGCGC
CCCGGTCGTCTTCAAGCAGAGTAGTACTACCGAGAATAATGACTCTCAGT
CCGATGAATCCGCTGCCAAAAAGCAGCAGCTCAGTGCTGCTTCTCTCAGA
TTTCAGCCTACCAAGAGGCCCCAGCTAGCAGCTCAGAAACCGAAACCGAA
GCCGACGTTACCAAAGGCTGCTGCTGCACCAGCGGCTCCGGCAGCAGCCC
CTGTCAAGACTACTCTCGCAGATTGGGCAGCCACCGAGGATGACGATGTC
AATGGATTCTATGCCGGTCCGAAGAGGCAACGAGGTGGGCGCAAGAAGCG
CAAGAAGAATCGCGAGGCGCAGGAGTTCATACAAAACTGGGACGACATCT
ATGACCCGTCGCGACCGAACAACTACGAAGAGTACAAGCACAGTGACGAA
CAAATAGCTGAGGTGAGGGAGTGGAAAGACCGTCTTTACGCACACCGCAT
GGCCAGATCGCCCAGCAGGGACTCACAAAGTGACGATGATTATGCACGAC
CCATGAACCGTAAATTTGCTCCTCCGAGCAGCTTCGCACCGCCTCCCAAT
CTCAACGATATGCCGCCCAGGCCACCCATCGAATCACCTCCAGAACGAAC
AAGCGAAACCCCAGGCGATATTTCAATGTCGGATGCTCCTCCGCCGCCAC
CCCCGACCGATGAGCCGCCCGCACAAGTTCCGGATGACCCTACAGGCGAA
GATGCTTACTTACGGCGCCTCCAAATGTCGATGGGCAACCAGCCTACAGC
AGCTCCTGCTGCGCCACCACCACCACCCAGGCCCCTAGAATCCCTACAAC
CAGCTTCCGCAACTATATCCCGCGCGCCGGTTCGCTACACGCTACCTCCT
CCACCCGAGGACATACCTGCGTCAGAGGCGGAACTTGAAGAAGTCTTCGC
AAAGGAACAGCCAGTGGAAGATGAACCGGAAGATGAGGGCCAGCGTTCGC
TGCGGCCAGGACAGAAAGGGTTTGCTGAGCGACTCATGGCCAAGTATGGC
TGGACCAAGGGCTCTGGCCTGGGTGCCACGGGCTCCGGCATTGTCAAGCC
ACTGCAAGTCAAAGTTGAGAAACAGAAGAAACGACCCGACTCTGAAGGTG
GAGGCTTTGCGACGCCCGCTGGTCGGGGCAAGATCATTGGTGGCGCAAGA
AAGAATGAAGAGGAGGGGAAGTTTGGTCCAATGAGTGAAGTCATTATATT
GAAGGGTATGCTTGATGGAATGGACTTGGATGCTGAGTTGGCTGGGGACG
GCGAGGGCGGTGGTCTCATGCAAGAAATTGGCGAAGAGTGTTCTGAGAAG
TACGGTCGTGTTGAACGTGTCTTCATACCCCGCGACTCGGCACCTCCAGT
GCCAGTTTTTGTCAAGTTTACCAATCAGCTCTCGGCTCTACGTGCTGTCA
ACGCTCTTGAGGGTCGGATCTTCAGTGGAAATGCTATCACTGCCCGGTTC
TACGATGTACATACTTTCGAACAGGGGATATACGATAGCTAAATGGCTTC
TGATTCCACCCCCGCAAAGCCAGGGGGCACCTTGTCACTCTACGCCAATC
TGCTAGATCCCTCTGCCGATAACTCTCCCGGAACGATCGCTCGCGCCCCG
GTCGTCTTCAAGCAGAGTAGTACTACCGAGAATAATGACTCTCAGTCCGA
TGAATCCGCTGCCAAAAAGCAGCAGCTCAGTGCTGCTTCTCTCAGATTTC
AGCCTACCAAGAGGCCCCAGCTAGCAGCTCAGAAACCGAAACCGAAGCCG
ACGTTACCAAAGGCTGCTGCTGCACCAGCGGCTCCGGCAGCAGCCCCTGT
CAAGACTACTCTCGCAGATTGGGCAGCCACCGAGGATGACGATGTCAATG
GATTCTATGCCGGTCCGAAGAGGCAACGAGGTGGGCGCAAGAAGCGCAAG
AAGAATCGCGAGGCGCAGGAGTTCATACAAAACTGGGACGACATCTATGA
CCCGTCGCGACCGAACAACTACGAAGAGTACAAGCACAGTGACGAACAAA
TAGCTGAGGTGAGGGAGTGGAAAGACCGTCTTTACGCACACCGCATGGCC
AGATCGCCCAGCAGGGACTCACAAAGTGACGATGATTATGCACGACCCAT
GAACCGTAAATTTGCTCCTCCGAGCAGCTTCGCACCGCCTCCCAATCTCA
ACGATATGCCGCCCAGGCCACCCATCGAATCACCTCCAGAACGAACAAGC
GAAACCCCAGGCGATATTTCAATGTCGGATGCTCCTCCGCCGCCACCCCC
GACCGATGAGCCGCCCGCACAAGTTCCGGATGACCCTACAGGCGAAGATG
CTTACTTACGGCGCCTCCAAATGTCGATGGGCAACCAGCCTACAGCAGCT
CCTGCTGCGCCACCACCACCACCCAGGCCCCTAGAATCCCTACAACCAGC
TTCCGCAACTATATCCCGCGCGCCGGTTCGCTACACGCTACCTCCTCCAC
CCGAGGACATACCTGCGTCAGAGGCGGAACTTGAAGAAGTCTTCGCAAAG
GAACAGCCAGTGGAAGATGAACCGGAAGATGAGGGCCAGCGTTCGCTGCG
GCCAGGACAGAAAGGGTTTGCTGAGCGACTCATGGCCAAGTATGGCTGGA
CCAAGGGCTCTGGCCTGGGTGCCACGGGCTCCGGCATTGTCAAGCCACTG
CAAGTCAAAGTTGAGAAACAGAAGAAACGACCCGACTCTGAAGGTGGAGG
CTTTGCGACGCCCGCTGGTCGGGGCAAGATCATTGGTGGCGCAAGAAAGA
ATGAAGAGGAGGGGAAGTTTGGTCCAATGAGTGAAGTCATTATATTGAAG
GGTATGCTTGATGGAATGGACTTGGATGCTGAGTTGGCTGGGGACGGCGA
GGGCGGTGGTCTCATGCAAGAAATTGGCGAAGAGTGTTCTGAGAAGTACG
GTCGTGTTGAACGTGTCTTCATACCCCGCGACTCGGCACCTCCAGTGCCA
GTTTTTGTCAAGTTTACCAATCAGCTCTCGGCTCTACGTGCTGTCAACGC
TCTTGAGGGTCGGATCTTCAGTGGAAATGCTATCACTGCCCGGTTCTACG
ATGTACATACTTTCGAACAGGGGATATACGATAGCTAAATGGCTTCTGAT
TCCACCCCCGCAAAGCCAGGGGGCACCTTGTCACTCTACGCCAATCTGCT
AGATCCCTCTGCCGATAACTCTCCCGGAACGATCGCTCGCGCCCCGGTCG
TCTTCAAGCAGAGTAGTACTACCGAGAATAATGACTCTCAGTCCGATGAA
TCCGCTGCCAAAAAGCAGCAGCTCAGTGCTGCTTCTCTCAGATTTCAGCC
TACCAAGAGGCCCCAGCTAGCAGCTCAGAAACCGAAACCGAAGCCGACGT
TACCAAAGGCTGCTGCTGCACCAGCGGCTCCGGCAGCAGCCCCTGTCAAG
ACTACTCTCGCAGATTGGGCAGCCACCGAGGATGACGATGTCAATGGATT
CTATGCCGGTCCGAAGAGGCAACGAGGTGGGCGCAAGAAGCGCAAGAAGA
ATCGCGAGGCGCAGGAGTTCATACAAAACTGGGACGACATCTATGACCCG
TCGCGACCGAACAACTACGAAGAGTACAAGCACAGTGACGAACAAATAGC
TGAGGTGAGGGAGTGGAAAGACCGTCTTTACGCACACCGCATGGCCAGAT
CGCCCAGCAGGGACTCACAAAGTGACGATGATTATGCACGACCCATGAAC
CGTAAATTTGCTCCTCCGAGCAGCTTCGCACCGCCTCCCAATCTCAACGA
TATGCCGCCCAGGCCACCCATCGAATCACCTCCAGAACGAACAAGCGAAA
CCCCAGGCGATATTTCAATGTCGGATGCTCCTCCGCCGCCACCCCCGACC
GATGAGCCGCCCGCACAAGTTCCGGATGACCCTACAGGCGAAGATGCTTA
CTTACGGCGCCTCCAAATGTCGATGGGCAACCAGCCTACAGCAGCTCCTG
CTGCGCCACCACCACCACCCAGGCCCCTAGAATCCCTACAACCAGCTTCC
GCAACTATATCCCGCGCGCCGGTTCGCTACACGCTACCTCCTCCACCCGA
GGACATACCTGCGTCAGAGGCGGAACTTGAAGAAGTCTTCGCAAAGGAAC
AGCCAGTGGAAGATGAACCGGAAGATGAGGGCCAGCGTTCGCTGCGGCCA
GGACAGAAAGGGTTTGCTGAGCGACTCATGGCCAAGTATGGCTGGACCAA
GGGCTCTGGCCTGGGTGCCACGGGCTCCGGCATTGTCAAGCCACTGCAAG
TCAAAGTTGAGAAACAGAAGAAACGACCCGACTCTGAAGGTGGAGGCTTT
GCGACGCCCGCTGGTCGGGGCAAGATCATTGGTGGCGCAAGAAAGAATGA
AGAGGAGGGGAAGTTTGGTCCAATGAGTGAAGTCATTATATTGAAGGGTA
TGCTTGATGGAATGGACTTGGATGCTGAGTTGGCTGGGGACGGCGAGGGC
GGTGGTCTCATGCAAGAAATTGGCGAAGAGTGTTCTGAGAAGTACGGTCG
TGTTGAACGTGTCTTCATACCCCGCGACTCGGCACCTCCAGTGCCAGTTT
TTGTCAAGTTTACCAATCAGCTCTCGGCTCTACGTGCTGTCAACGCTCTT
GAGGGTCGGATCTTCAGTGGAAATGCTATCACTGCCCGGTTCTACGATGT
ACATACTTTCGAACAGGGGATATACGATAGCTAAATGGCTTCTGATTCCA
CCCCCGCAAAGCCAGGGGGCACCTTGTCACTCTACGCCAATCTGCTAGAT
CCCTCTGCCGATAACTCTCCCGGAACGATCGCTCGCGCCCCGGTCGTCTT
CAAGCAGAGTAGTACTACCGAGAATAATGACTCTCAGTCCGATGAATCCG
CTGCCAAAAAGCAGCAGCTCAGTGCTGCTTCTCTCAGATTTCAGCCTACC
AAGAGGCCCCAGCTAGCAGCTCAGAAACCGAAACCGAAGCCGACGTTACC
AAAGGCTGCTGCTGCACCAGCGGCTCCGGCAGCAGCCCCTGTCAAGACTA
CTCTCGCAGATTGGGCAGCCACCGAGGATGACGATGTCAATGGATTCTAT
GCCGGTCCGAAGAGGCAACGAGGTGGGCGCAAGAAGCGCAAGAAGAATCG
CGAGGCGCAGGAGTTCATACAAAACTGGGACGACATCTATGACCCGTCGC
GACCGAACAACTACGAAGAGTACAAGCACAGTGACGAACAAATAGCTGAG
GTGAGGGAGTGGAAAGACCGTCTTTACGCACACCGCATGGCCAGATCGCC
CAGCAGGGACTCACAAAGTGACGATGATTATGCACGACCCATGAACCGTA
AATTTGCTCCTCCGAGCAGCTTCGCACCGCCTCCCAATCTCAACGATATG
CCGCCCAGGCCACCCATCGAATCACCTCCAGAACGAACAAGCGAAACCCC
AGGCGATATTTCAATGTCGGATGCTCCTCCGCCGCCACCCCCGACCGATG
AGCCGCCCGCACAAGTTCCGGATGACCCTACAGGCGAAGATGCTTACTTA
CGGCGCCTCCAAATGTCGATGGGCAACCAGCCTACAGCAGCTCCTGCTGC
GCCACCACCACCACCCAGGCCCCTAGAATCCCTACAACCAGCTTCCGCAA
CTATATCCCGCGCGCCGGTTCGCTACACGCTACCTCCTCCACCCGAGGAC
ATACCTGCGTCAGAGGCGGAACTTGAAGAAGTCTTCGCAAAGGAACAGCC
AGTGGAAGATGAACCGGAAGATGAGGGCCAGCGTTCGCTGCGGCCAGGAC
AGAAAGGGTTTGCTGAGCGACTCATGGCCAAGTATGGCTGGACCAAGGGC
TCTGGCCTGGGTGCCACGGGCTCCGGCATTGTCAAGCCACTGCAAGTCAA
AGTTGAGAAACAGAAGAAACGACCCGACTCTGAAGGTGGAGGCTTTGCGA
CGCCCGCTGGTCGGGGCAAGATCATTGGTGGCGCAAGAAAGAATGAAGAG
GAGGGGAAGTTTGGTCCAATGAGTGAAGTCATTATATTGAAGGGTATGCT
TGATGGAATGGACTTGGATGCTGAGTTGGCTGGGGACGGCGAGGGCGGTG
GTCTCATGCAAGAAATTGGCGAAGAGTGTTCTGAGAAGTACGGTCGTGTT
GAACGTGTCTTCATACCCCGCGACTCGGCACCTCCAGTGCCAGTTTTTGT
CAAGTTTACCAATCAGCTCTCGGCTCTACGTGCTGTCAACGCTCTTGAGG
GTCGGATCTTCAGTGGAAATGCTATCACTGCCCGGTTCTACGATGTACAT
ACTTTCGAACAGGGGATATACGATAGCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0043484 | regulation of RNA splicing |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| PFAM | PF01585 |
| InterPro | IPR012677 |
| InterPro | IPR040052 |
| PFAM | PF00076 |
| InterPro | IPR000504 |
| InterPro | IPR000467 |
| InterPro | IPR035979 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000142 | supercontig | MCQH01000142:342372..344229 + |
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