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ATCC10864_005451-T1, ATCC10864_005451-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005451-T1
Unique NameATCC10864_005451-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000142:355987..357412+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005451-T1 ID=ATCC10864_005451-T1|Name=ATCC10864_005451-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1426bp|location=Sequence derived from alignment at MCQH01000142:355987..357412+ (Aspergillus niger ATCC 10864)
ATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTCACCGCATCTCCG
CGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCACCTCCGACAAAA
CAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCCGCGGTCGATGAT
CACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTCCAGGCGACAAGC
CATCATCAAAGCTCACCCGGAGGTATGCACATACTCCCCCGTGGCCTTTT
CTACCAAAGATTCATTTACTGACATGACCTCCTTCGTGCTTCCTTCAGGT
TACCAAGCTCTGCGGACCAGAGCCCCTGACCAAATATGTCGTTCTGGGCG
TCGTCTCCCTTCAGATCCTCTGCGCCTACCTGCTCCGCAACACGTCCATG
TTCGACTGGAGATTTCTCGCGACTGCATACGTGATCGGAGCCACCTCGAA
CCAGAACCTCTTCCTCGCCATCCACGAGATCTCCCATAACCTCGCCTTCC
GGTCTGCTATGGCCAACCGTCTCTTGGCCATCTTCGCCAATATCCCGATC
GGTTTGCCCTATAGCGCTGCATTCCGGGTACGTTGGACTATGACATCCAG
AAGCATATAAAACCAAGTATACAAGAAGCTAACTTTTCCCGCTCCATAGC
CCTACCATCTCACCCACCACAAGTCCCTCGGTGTCGCAGGCCTAGATACC
GACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGACTCCCTTCTAGGAAA
GGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGCCGTCCGCCCCATGT
TCATCTACAGCCCCCCCTTCACCTCCATTCACGTCCTGAACCTGATCACT
CAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGCGGCGGCTCCCTCCA
ACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGCCGGCTCTCTCCACC
CCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCTTCTCCCGCGTCGAC
CACGGTACCGAGTCTATCCAAGAGCAGAAGAACAACCAGAAGAAGTCCCA
CCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTCCTACTACGGCCCCC
TCAACTTCTTCACCTACAACGTGGGCCTGCATAACGAACACCACGACTTC
CCCGCTATCCCCTGGACAAGACTGCACGAGCTCCACCGCATCGCTAGCGA
ATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGTGTGGGTGATCTGGA
CATTCATCCTGGACAAGAACGTCGGCATGTGGTGTCGGGTTAAGCGTGCG
CAGGGCGGTCGTCTCGTTGGTGGTGGTGGTGGTAGCGGACGCGCAGGTGA
AAGCATCTCGGCTTCGTCGGCTGGTCCGGAAGGGGAGTCGGGAGATGGGT
GGAAGGAGAGTGAGATTCAGAATTGA
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Coding sequence (CDS) from alignment at MCQH01000142:355987..357412+

>ATCC10864_005451-T1 ID=ATCC10864_005451-T1|Name=ATCC10864_005451-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3834bp|location=Sequence derived from alignment at MCQH01000142:355987..357412+ (Aspergillus niger ATCC 10864)
ATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTCACCGCATCTCCG
CGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCACCTCCGACAAAA
CAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCCGCGGTCGATGAT
CACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTCCAGGCGACAAGC
CATCATCAAAGCTCACCCGGAGGTTACCAAGCTCTGCGGACCAGAGCCCC
TGACCAAATATGTCGTTCTGGGCGTCGTCTCCCTTCAGATCCTCTGCGCC
TACCTGCTCCGCAACACGTCCATGTTCGACTGGAGATTTCTCGCGACTGC
ATACGTGATCGGAGCCACCTCGAACCAGAACCTCTTCCTCGCCATCCACG
AGATCTCCCATAACCTCGCCTTCCGGTCTGCTATGGCCAACCGTCTCTTG
GCCATCTTCGCCAATATCCCGATCGGTTTGCCCTATAGCGCTGCATTCCG
GCCCTACCATCTCACCCACCACAAGTCCCTCGGTGTCGCAGGCCTAGATA
CCGACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGACTCCCTTCTAGGA
AAGGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGCCGTCCGCCCCAT
GTTCATCTACAGCCCCCCCTTCACCTCCATTCACGTCCTGAACCTGATCA
CTCAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGCGGCGGCTCCCTC
CAACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGCCGGCTCTCTCCA
CCCCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCTTCTCCCGCGTCG
ACCACGGTACCGAGTCTATCCAAGAGCAGAAGAACAACCAGAAGAAGTCC
CACCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTCCTACTACGGCCC
CCTCAACTTCTTCACCTACAACGTGGGCCTGCATAACGAACACCACGACT
TCCCCGCTATCCCCTGGACAAGACTGCACGAGCTCCACCGCATCGCTAGC
GAATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGTGTGGGTGATCTG
GACATTCATCCTGGACAAGAACGTCGGCATGTGGTGTCGGGTTAAGCGTG
CGCAGGGCGGTCGTCTCGTTGGTGGTGGTGGTGGTAGCGGACGCGCAGGT
GAAAGCATCTCGGCTTCGTCGGCTGGTCCGGAAGGGGAGTCGGGAGATGG
GTGGAAGGAGAGTGAGATTCAGAATTGAATGTCTTCGTCCGTCGTCGAAG
CCACCGCGGATGCTTCACCGCATCTCCGCGTGTCCGCATCCAAGAAGAGC
CAGGCTCCGCAAACCACCTCCGACAAAACAGAGCCTTCTACCAGAATCGA
TCCTCCAGAAGCCTCCGCGGTCGATGATCACTTCTTTTGGACATACACAG
AGGAGCCGCATCGCTCCAGGCGACAAGCCATCATCAAAGCTCACCCGGAG
GTTACCAAGCTCTGCGGACCAGAGCCCCTGACCAAATATGTCGTTCTGGG
CGTCGTCTCCCTTCAGATCCTCTGCGCCTACCTGCTCCGCAACACGTCCA
TGTTCGACTGGAGATTTCTCGCGACTGCATACGTGATCGGAGCCACCTCG
AACCAGAACCTCTTCCTCGCCATCCACGAGATCTCCCATAACCTCGCCTT
CCGGTCTGCTATGGCCAACCGTCTCTTGGCCATCTTCGCCAATATCCCGA
TCGGTTTGCCCTATAGCGCTGCATTCCGGCCCTACCATCTCACCCACCAC
AAGTCCCTCGGTGTCGCAGGCCTAGATACCGACCTTCCCACCGCCGTCGA
AGCCTTCCTCCTCGACTCCCTTCTAGGAAAGGCATTCTTCTGCACCTTCC
AGATCTTCTTCTACGCCGTCCGCCCCATGTTCATCTACAGCCCCCCCTTC
ACCTCCATTCACGTCCTGAACCTGATCACTCAGCTCACCTTCGACTACGC
TTTGACCAAGTTCTGCGGCGGCTCCCTCCAACCTCTTCTATACCTCCTTC
TGAGCTCCTTCCTAGCCGGCTCTCTCCACCCCTGTGCCGGCCACTTCATC
GCAGAGCACTACTTCTTCTCCCGCGTCGACCACGGTACCGAGTCTATCCA
AGAGCAGAAGAACAACCAGAAGAAGTCCCACCCTCTCGACTCCCTTCCCC
CACCGGAAACCTACTCCTACTACGGCCCCCTCAACTTCTTCACCTACAAC
GTGGGCCTGCATAACGAACACCACGACTTCCCCGCTATCCCCTGGACAAG
ACTGCACGAGCTCCACCGCATCGCTAGCGAATTCTACGAGCCCCTCCCCT
GCCACCACAGCTGGGTGTGGGTGATCTGGACATTCATCCTGGACAAGAAC
GTCGGCATGTGGTGTCGGGTTAAGCGTGCGCAGGGCGGTCGTCTCGTTGG
TGGTGGTGGTGGTAGCGGACGCGCAGGTGAAAGCATCTCGGCTTCGTCGG
CTGGTCCGGAAGGGGAGTCGGGAGATGGGTGGAAGGAGAGTGAGATTCAG
AATTGAATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTCACCGCA
TCTCCGCGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCACCTCCG
ACAAAACAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCCGCGGTC
GATGATCACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTCCAGGCG
ACAAGCCATCATCAAAGCTCACCCGGAGGTTACCAAGCTCTGCGGACCAG
AGCCCCTGACCAAATATGTCGTTCTGGGCGTCGTCTCCCTTCAGATCCTC
TGCGCCTACCTGCTCCGCAACACGTCCATGTTCGACTGGAGATTTCTCGC
GACTGCATACGTGATCGGAGCCACCTCGAACCAGAACCTCTTCCTCGCCA
TCCACGAGATCTCCCATAACCTCGCCTTCCGGTCTGCTATGGCCAACCGT
CTCTTGGCCATCTTCGCCAATATCCCGATCGGTTTGCCCTATAGCGCTGC
ATTCCGGCCCTACCATCTCACCCACCACAAGTCCCTCGGTGTCGCAGGCC
TAGATACCGACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGACTCCCTT
CTAGGAAAGGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGCCGTCCG
CCCCATGTTCATCTACAGCCCCCCCTTCACCTCCATTCACGTCCTGAACC
TGATCACTCAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGCGGCGGC
TCCCTCCAACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGCCGGCTC
TCTCCACCCCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCTTCTCCC
GCGTCGACCACGGTACCGAGTCTATCCAAGAGCAGAAGAACAACCAGAAG
AAGTCCCACCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTCCTACTA
CGGCCCCCTCAACTTCTTCACCTACAACGTGGGCCTGCATAACGAACACC
ACGACTTCCCCGCTATCCCCTGGACAAGACTGCACGAGCTCCACCGCATC
GCTAGCGAATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGTGTGGGT
GATCTGGACATTCATCCTGGACAAGAACGTCGGCATGTGGTGTCGGGTTA
AGCGTGCGCAGGGCGGTCGTCTCGTTGGTGGTGGTGGTGGTAGCGGACGC
GCAGGTGAAAGCATCTCGGCTTCGTCGGCTGGTCCGGAAGGGGAGTCGGG
AGATGGGTGGAAGGAGAGTGAGATTCAGAATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0042284sphingolipid delta-4 desaturase activity
Vocabulary: Biological Process
TermDefinition
GO:0030148sphingolipid biosynthetic process
GO:0006629lipid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005451ATCC10864_005451Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005451-T1.exon1ATCC10864_005451-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005451-T1.exon2ATCC10864_005451-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005451-T1.exon3ATCC10864_005451-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005451-T1.cdsATCC10864_005451-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005451-T1ATCC10864_005451-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00487
InterProIPR005804
InterProIPR013866
InterProIPR011388
PFAMPF08557
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000142supercontigMCQH01000142:355987..357412 +
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