You are here

Home

ATCC10864_005474-T1, ATCC10864_005474-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005474-T1
Unique NameATCC10864_005474-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000153:23952..24418-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005474-T1 ID=ATCC10864_005474-T1|Name=ATCC10864_005474-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=467bp|location=Sequence derived from alignment at MCQH01000153:23952..24418- (Aspergillus niger ATCC 10864)
ATGATCACTCACATCGTCCAATTCCAGTTCAAATCCTCTCTCGCCCCCGA
AAGGGTCCAGGAGGTGAGTCAGCATTCCCTTACGTCATGTCCAACTGACA
CCACAGCATCTGACTCACTGGTTTTCATGCTAGACATGCGCTCACCTCGT
CTCCCTGAAGGACAAGTGTCTACATCCTATCACTCAGAAGCCATACATAA
AGTCATTCAGAGCAGGAAAGCAGGATTCACCTGAGGGTAAGAATGTAGGT
GATTCATGCCCGGAAGTAGTTGGATTGGGAGAAATATCCACGCTAATAAA
GACGACTTCAGAATGGAATCACCCATGTCTTCGTCATGGAGTTTGAGTCC
GATCAAGACAGAGAGTATTATCTCACCAAAGACCCGGCGCATCTAGGCTT
CGTTCAGACCCTGGATGGCCTGATCGAAAAGTCCCAGGTGGTCGACTTCA
CCGAGGGCGTCTTCTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000153:23952..24418-

>ATCC10864_005474-T1 ID=ATCC10864_005474-T1|Name=ATCC10864_005474-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=990bp|location=Sequence derived from alignment at MCQH01000153:23952..24418- (Aspergillus niger ATCC 10864)
AATGGAATCACCCATGTCTTCGTCATGGAGTTTGAGTCCGATCAAGACAG
AGAGTATTATCTCACCAAAGACCCGGCGCATCTAGGCTTCGTTCAGACCC
TGGATGGCCTGATCGAAAAGTCCCAGGTGGTCGACTTCACCGAGGGCGTC
TTCTAAACATGCGCTCACCTCGTCTCCCTGAAGGACAAGTGTCTACATCC
TATCACTCAGAAGCCATACATAAAGTCATTCAGAGCAGGAAAGCAGGATT
CACCTGAGGGTAAGAATATGATCACTCACATCGTCCAATTCCAGTTCAAA
TCCTCTCTCGCCCCCGAAAGGGTCCAGGAGAATGGAATCACCCATGTCTT
CGTCATGGAGTTTGAGTCCGATCAAGACAGAGAGTATTATCTCACCAAAG
ACCCGGCGCATCTAGGCTTCGTTCAGACCCTGGATGGCCTGATCGAAAAG
TCCCAGGTGGTCGACTTCACCGAGGGCGTCTTCTAAACATGCGCTCACCT
CGTCTCCCTGAAGGACAAGTGTCTACATCCTATCACTCAGAAGCCATACA
TAAAGTCATTCAGAGCAGGAAAGCAGGATTCACCTGAGGGTAAGAATATG
ATCACTCACATCGTCCAATTCCAGTTCAAATCCTCTCTCGCCCCCGAAAG
GGTCCAGGAGAATGGAATCACCCATGTCTTCGTCATGGAGTTTGAGTCCG
ATCAAGACAGAGAGTATTATCTCACCAAAGACCCGGCGCATCTAGGCTTC
GTTCAGACCCTGGATGGCCTGATCGAAAAGTCCCAGGTGGTCGACTTCAC
CGAGGGCGTCTTCTAAACATGCGCTCACCTCGTCTCCCTGAAGGACAAGT
GTCTACATCCTATCACTCAGAAGCCATACATAAAGTCATTCAGAGCAGGA
AAGCAGGATTCACCTGAGGGTAAGAATATGATCACTCACATCGTCCAATT
CCAGTTCAAATCCTCTCTCGCCCCCGAAAGGGTCCAGGAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005474ATCC10864_005474Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005474-T1ATCC10864_005474-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005474-T1.cdsATCC10864_005474-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005474-T1.exon3ATCC10864_005474-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005474-T1.exon2ATCC10864_005474-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005474-T1.exon1ATCC10864_005474-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013097
PFAMPF07876
InterProIPR011008
InterProIPR044662
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000153supercontigMCQH01000153:23952..24418 -
Powered by Drupal