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ATCC10864_005494-T1, ATCC10864_005494-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005494-T1
Unique NameATCC10864_005494-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000153:95407..96340+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005494-T1 ID=ATCC10864_005494-T1|Name=ATCC10864_005494-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=934bp|location=Sequence derived from alignment at MCQH01000153:95407..96340+ (Aspergillus niger ATCC 10864)
ATGGTCGGTCACGGTATGACGGGGATGCTCGGCGAGGGTTAGTGGTCTCG
TGCTGTGAGTTCATGATGTGTCGGAGCAGGAGCTAATTAGTTATTGCAGA
TGGCATTCATGTTGACATGAACCACTTGAAGAGCGGAGAAGTAAAGTATG
TCCTGACTTACTCAATGAGACTTGCATGAACGGTCACTAACTCATCTGTA
CAGCCTAGGAACGTCGATGTGAGTTTCAGTCAGCCTCCGATGCAACAACT
ATTCCATATGTTGACGAAATACAGCATGGCTATCAACTTCAAGGATGGTG
TTATATTGGGTGCCGACAGTCGGACGACAACCGGAGCTTACATCGCCAAT
CGAGTCACCGACAAGTTGACGCAGGTCCATGACACAATCTGGTGCTGTCG
ATCAGGGTCCGCCGCGGACACTCAGGCTGTGGCAGATATTGTGTCCTATC
ACCTCAACATGTACTCGATCACCAACAACGAGGCGCCGAGTACTCAGGTC
GCCGCATCGCTGTTCCAAGAGCTATGTTACGAGAACAAGGACATGCTAAG
GTAGGCACACAACCGGATCAGCCTGGACCGAGCAATCTTTGTTGACCAAT
CAATCACAGTGCCGGTATCATCATCGCCGGATACGACCCGAAGCACGGAG
GTCAGGTGTATTCGATACCGTTGGGCGGGTCTCTTCACAAGCAACCGTTC
TCTATCGGCGGATCTGGATCAACCTATATCTATGGCTACTGTGATGCTCA
CTGGAGGGAGAACATGACAGAGGAGGAAGGCATCAACTTCGTCCGCGGAG
CACTGCAAGAAGCAATCAAGTGGGATGGCAGTTCCGGTGGTGTAATCCGA
CTGGTGGTGCTGACGTCTCGGGGCGCCCAGCGACACCTCTACCTGCCAGA
CACGGGCTACACCGGCCCGGGCGTTACCAATTAA
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Coding sequence (CDS) from alignment at MCQH01000153:95407..96340+

>ATCC10864_005494-T1 ID=ATCC10864_005494-T1|Name=ATCC10864_005494-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3495bp|location=Sequence derived from alignment at MCQH01000153:95407..96340+ (Aspergillus niger ATCC 10864)
ATGGTCGGTCACGGTATGACGGGGATGCTCGGCGAGGATGGCATTCATGT
TGACATGAACCACTTGAAGAGCGGAGAAGTAAACCTAGGAACGTCGATCA
TGGCTATCAACTTCAAGGATGGTGTTATATTGGGTGCCGACAGTCGGACG
ACAACCGGAGCTTACATCGCCAATCGAGTCACCGACAAGTTGACGCAGGT
CCATGACACAATCTGGTGCTGTCGATCAGGGTCCGCCGCGGACACTCAGG
CTGTGGCAGATATTGTGTCCTATCACCTCAACATGTACTCGATCACCAAC
AACGAGGCGCCGAGTACTCAGGTCGCCGCATCGCTGTTCCAAGAGCTATG
TTACGAGAACAAGGACATGCTAAGTGCCGGTATCATCATCGCCGGATACG
ACCCGAAGCACGGAGGTCAGGTGTATTCGATACCGTTGGGCGGGTCTCTT
CACAAGCAACCGTTCTCTATCGGCGGATCTGGATCAACCTATATCTATGG
CTACTGTGATGCTCACTGGAGGGAGAACATGACAGAGGAGGAAGGCATCA
ACTTCGTCCGCGGAGCACTGCAAGAAGCAATCAAGTGGGATGGCAGTTCC
GGTGGTGTAATCCGACTGGTGGTGCTGACGTCTCGGGGCGCCCAGCGACA
CCTCTACCTGCCAGACACGGGCTACACCGGCCCGGGCGTTACCAATTAAA
TGGTCGGTCACGGTATGACGGGGATGCTCGGCGAGGATGGCATTCATGTT
GACATGAACCACTTGAAGAGCGGAGAAGTAAACCTAGGAACGTCGATCAT
GGCTATCAACTTCAAGGATGGTGTTATATTGGGTGCCGACAGTCGGACGA
CAACCGGAGCTTACATCGCCAATCGAGTCACCGACAAGTTGACGCAGGTC
CATGACACAATCTGGTGCTGTCGATCAGGGTCCGCCGCGGACACTCAGGC
TGTGGCAGATATTGTGTCCTATCACCTCAACATGTACTCGATCACCAACA
ACGAGGCGCCGAGTACTCAGGTCGCCGCATCGCTGTTCCAAGAGCTATGT
TACGAGAACAAGGACATGCTAAGTGCCGGTATCATCATCGCCGGATACGA
CCCGAAGCACGGAGGTCAGGTGTATTCGATACCGTTGGGCGGGTCTCTTC
ACAAGCAACCGTTCTCTATCGGCGGATCTGGATCAACCTATATCTATGGC
TACTGTGATGCTCACTGGAGGGAGAACATGACAGAGGAGGAAGGCATCAA
CTTCGTCCGCGGAGCACTGCAAGAAGCAATCAAGTGGGATGGCAGTTCCG
GTGGTGTAATCCGACTGGTGGTGCTGACGTCTCGGGGCGCCCAGCGACAC
CTCTACCTGCCAGACACGGGCTACACCGGCCCGGGCGTTACCAATTAAAT
GGTCGGTCACGGTATGACGGGGATGCTCGGCGAGGATGGCATTCATGTTG
ACATGAACCACTTGAAGAGCGGAGAAGTAAACCTAGGAACGTCGATCATG
GCTATCAACTTCAAGGATGGTGTTATATTGGGTGCCGACAGTCGGACGAC
AACCGGAGCTTACATCGCCAATCGAGTCACCGACAAGTTGACGCAGGTCC
ATGACACAATCTGGTGCTGTCGATCAGGGTCCGCCGCGGACACTCAGGCT
GTGGCAGATATTGTGTCCTATCACCTCAACATGTACTCGATCACCAACAA
CGAGGCGCCGAGTACTCAGGTCGCCGCATCGCTGTTCCAAGAGCTATGTT
ACGAGAACAAGGACATGCTAAGTGCCGGTATCATCATCGCCGGATACGAC
CCGAAGCACGGAGGTCAGGTGTATTCGATACCGTTGGGCGGGTCTCTTCA
CAAGCAACCGTTCTCTATCGGCGGATCTGGATCAACCTATATCTATGGCT
ACTGTGATGCTCACTGGAGGGAGAACATGACAGAGGAGGAAGGCATCAAC
TTCGTCCGCGGAGCACTGCAAGAAGCAATCAAGTGGGATGGCAGTTCCGG
TGGTGTAATCCGACTGGTGGTGCTGACGTCTCGGGGCGCCCAGCGACACC
TCTACCTGCCAGACACGGGCTACACCGGCCCGGGCGTTACCAATTAAATG
GTCGGTCACGGTATGACGGGGATGCTCGGCGAGGATGGCATTCATGTTGA
CATGAACCACTTGAAGAGCGGAGAAGTAAACCTAGGAACGTCGATCATGG
CTATCAACTTCAAGGATGGTGTTATATTGGGTGCCGACAGTCGGACGACA
ACCGGAGCTTACATCGCCAATCGAGTCACCGACAAGTTGACGCAGGTCCA
TGACACAATCTGGTGCTGTCGATCAGGGTCCGCCGCGGACACTCAGGCTG
TGGCAGATATTGTGTCCTATCACCTCAACATGTACTCGATCACCAACAAC
GAGGCGCCGAGTACTCAGGTCGCCGCATCGCTGTTCCAAGAGCTATGTTA
CGAGAACAAGGACATGCTAAGTGCCGGTATCATCATCGCCGGATACGACC
CGAAGCACGGAGGTCAGGTGTATTCGATACCGTTGGGCGGGTCTCTTCAC
AAGCAACCGTTCTCTATCGGCGGATCTGGATCAACCTATATCTATGGCTA
CTGTGATGCTCACTGGAGGGAGAACATGACAGAGGAGGAAGGCATCAACT
TCGTCCGCGGAGCACTGCAAGAAGCAATCAAGTGGGATGGCAGTTCCGGT
GGTGTAATCCGACTGGTGGTGCTGACGTCTCGGGGCGCCCAGCGACACCT
CTACCTGCCAGACACGGGCTACACCGGCCCGGGCGTTACCAATTAAATGG
TCGGTCACGGTATGACGGGGATGCTCGGCGAGGATGGCATTCATGTTGAC
ATGAACCACTTGAAGAGCGGAGAAGTAAACCTAGGAACGTCGATCATGGC
TATCAACTTCAAGGATGGTGTTATATTGGGTGCCGACAGTCGGACGACAA
CCGGAGCTTACATCGCCAATCGAGTCACCGACAAGTTGACGCAGGTCCAT
GACACAATCTGGTGCTGTCGATCAGGGTCCGCCGCGGACACTCAGGCTGT
GGCAGATATTGTGTCCTATCACCTCAACATGTACTCGATCACCAACAACG
AGGCGCCGAGTACTCAGGTCGCCGCATCGCTGTTCCAAGAGCTATGTTAC
GAGAACAAGGACATGCTAAGTGCCGGTATCATCATCGCCGGATACGACCC
GAAGCACGGAGGTCAGGTGTATTCGATACCGTTGGGCGGGTCTCTTCACA
AGCAACCGTTCTCTATCGGCGGATCTGGATCAACCTATATCTATGGCTAC
TGTGATGCTCACTGGAGGGAGAACATGACAGAGGAGGAAGGCATCAACTT
CGTCCGCGGAGCACTGCAAGAAGCAATCAAGTGGGATGGCAGTTCCGGTG
GTGTAATCCGACTGGTGGTGCTGACGTCTCGGGGCGCCCAGCGACACCTC
TACCTGCCAGACACGGGCTACACCGGCCCGGGCGTTACCAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRE3ATCC10864_005494Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005494-T1ATCC10864_005494-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005494-T1.exon1ATCC10864_005494-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005494-T1.exon2ATCC10864_005494-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005494-T1.exon3ATCC10864_005494-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005494-T1.exon4ATCC10864_005494-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005494-T1.exon5ATCC10864_005494-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005494-T1.cdsATCC10864_005494-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000243
InterProIPR016050
InterProIPR001353
InterProIPR023333
InterProIPR037559
PFAMPF00227
InterProIPR029055
Properties
Property NameValue
NoteMEROPS:MER0001645
ProductProteasome subunit beta type-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000153supercontigMCQH01000153:95407..96340 +
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