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ATCC10864_005508-T1, ATCC10864_005508-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005508-T1
Unique NameATCC10864_005508-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000153:143458..144194+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005508-T1 ID=ATCC10864_005508-T1|Name=ATCC10864_005508-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=737bp|location=Sequence derived from alignment at MCQH01000153:143458..144194+ (Aspergillus niger ATCC 10864)
ATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGTCCT
CGGCCGTACCGGTACGTCGTGAATATCTCAATTTTCCGAATTTCGATGCC
TTTCGCCTGGATATATACAATTGCGGTGTTTCCGCAACGGCGTGGGGATG
GTACCTTTTGCTTGAGAGCAGATTCTAACAAGCATTTTACTTTTTAGGAT
CCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTCATGGACGATACCTCC
CGCAGCATCATCCGTAACGTCAAGGGCCCAGGTATGCGATTTCTCCGTTG
ATTGCAGTTGATGATATATATTTTCTACGGCTATGGTGGTGGCGCTGGTT
GGACCGAATCGAATTATTTCCCCTCGAAGAGAAAATCCCGCGAGAAGAAT
GGCAAAGAATGAGAGTGCGCACGCATCGGAAATCGACAACATCCACGATT
CTATAAGCGAAAAGGACGAATCTCCCAAACCCAACACGACGCACGCAGGA
ATCGAAGAGAAGGAATAAGGAAACCAAGCAGTATCGCGGGTTATTTTCAT
CTCCACGGGGAAATATCGCATTCAGTCCAGCCAGCCAGCCAACCAACCAG
TCGCTGCGTCATGTCCAAACCAAACCCATATATCGCACACATCAAGCTAA
CTAAACTCCTCTTCGTCGCAAACAGTCAAGGTCGACGACATCCTCTGCCT
GCTCGAGTCCGAACGCGAGGCCCGCCGTCTCCGTTAA
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Coding sequence (CDS) from alignment at MCQH01000153:143458..144194+

>ATCC10864_005508-T1 ID=ATCC10864_005508-T1|Name=ATCC10864_005508-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=621bp|location=Sequence derived from alignment at MCQH01000153:143458..144194+ (Aspergillus niger ATCC 10864)
ATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGTCCT
CGGCCGTACCGGATCCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTCA
TGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCCCAGTCAAG
GTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGCGAGGCCCGCCGTCT
CCGTTAAATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCC
GTGTCCTCGGCCGTACCGGATCCCGTGGTGGTGTCACCCAGGTCCGCGTC
GAGTTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCCC
AGTCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGCGAGGCCC
GCCGTCTCCGTTAAATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAG
GTCACCCGTGTCCTCGGCCGTACCGGATCCCGTGGTGGTGTCACCCAGGT
CCGCGTCGAGTTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTCA
AGGGCCCAGTCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGC
GAGGCCCGCCGTCTCCGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS28ATCC10864_005508Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005508-T1.exon1ATCC10864_005508-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005508-T1.exon2ATCC10864_005508-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005508-T1.exon3ATCC10864_005508-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005508-T1.cdsATCC10864_005508-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005508-T1ATCC10864_005508-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR028626
InterProIPR012340
PFAMPF01200
InterProIPR000289
Properties
Property NameValue
Product40S ribosomal protein S28
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000153supercontigMCQH01000153:143458..144194 +
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