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ATCC10864_005511-T1, ATCC10864_005511-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005511-T1
Unique NameATCC10864_005511-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000153:152227..153411-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005511-T1 ID=ATCC10864_005511-T1|Name=ATCC10864_005511-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1185bp|location=Sequence derived from alignment at MCQH01000153:152227..153411- (Aspergillus niger ATCC 10864)
ATGTCCTTAGTTTCGGGTCCTGGTAGGGCTGCTGGGATCGAATCCAGCTT
GAATCTTAGTGTCGAAAGACATGTGGATTACATCAAGAACTTGGACAGCG
TGCGTCAATTCTTACTATAACCATGGTTCTTCTCTTGATGATGGGGACGA
TGGTTGACAGGTGATGCTAGAGGAGGGATGAGCTAGAATATTGGCTTACA
GAACACCTTCGCCTGAATGGGGTGTATTGGGGCTTGACGGCTCTACATCT
CCTTGGCCGTCCCGATGTCCTTCCTCGTGAAGATACCATCGATTTTGTTC
TCTCGTGTCAACGGGAGAATGGCGGCTTCGGGGCAGCTCCGGGCCATGAT
GCACACATGCTGTACACAGTATCGGCAGTGCAAATTCTCGTAACCCTAGA
CGCGGTGGATGAGCTGGAGAAGCGCGGTCTAGGAGGAAAAGAGAAGGTTG
GCTCTTTCATCGCAGGGCTACAGGACAAAGACACTGGCGCTTTCATGGGC
GATGAATGGGGTGAGAGAGATACACGCTTTCTGTATGGCGCGTTTAATGC
ACTCTCCCTTCTTGGGCTTCTTCACACAGTTGATGTGCCCAAAGCCATTT
CCTATGTCCAACAGTGTGAGAACTTGGACGGCGGCTATGGCATCCAGCCT
GGAGCTGAGTCACATGCTGGTCAAATTTTCACTTGCGTAGGAGCTCTGGC
AATCGCCGGACGACTGGACTTGGTAAACAAGGACCGTCTTGGAGGTTGGC
TCAGCGAAAGACAGGTCGAAAATGGTGGTCTGAATGGAAGGCCCGAGAAA
CTGCCCGATGCATGCTATAGCTGGTGGGTTGGTGCTAGCTTGGCTATGAT
CGACAAACTCCACTGGATTGATAGTGGCAAGCTTTCTGCTTTCATCTTGC
GCTGTCAGGTATGTTATCCCTTCGCCATGGCCTTGCATGCATGGCACTGA
CGCAATCCAGGATTCGGAGGCTGGGGGTATCGGAGACAGACCAGGCAGCA
TGGTTGATGTGTTTCATACGCATTTTGCCATTGCCGGTTTGAGCCTGTTG
AAGTTCAATGGCATCCAAGAAGTAGATCCTGTTTAGTGAGTTATGCAAAC
CTGCGCAACGCAGTGGTGCGGATAGCTAACTTTCTTGTTTAGTTGTATGC
CGAAGGCAATTACACAGAAATATCTGCAACGGTAA
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Coding sequence (CDS) from alignment at MCQH01000153:152227..153411-

>ATCC10864_005511-T1 ID=ATCC10864_005511-T1|Name=ATCC10864_005511-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4020bp|location=Sequence derived from alignment at MCQH01000153:152227..153411- (Aspergillus niger ATCC 10864)
TTGTATGCCGAAGGCAATTACACAGAAATATCTGCAACGGTAAGATTCGG
AGGCTGGGGGTATCGGAGACAGACCAGGCAGCATGGTTGATGTGTTTCAT
ACGCATTTTGCCATTGCCGGTTTGAGCCTGTTGAAGTTCAATGGCATCCA
AGAAGTAGATCCTGTTTAAGGAGGGATGAGCTAGAATATTGGCTTACAGA
ACACCTTCGCCTGAATGGGGTGTATTGGGGCTTGACGGCTCTACATCTCC
TTGGCCGTCCCGATGTCCTTCCTCGTGAAGATACCATCGATTTTGTTCTC
TCGTGTCAACGGGAGAATGGCGGCTTCGGGGCAGCTCCGGGCCATGATGC
ACACATGCTGTACACAGTATCGGCAGTGCAAATTCTCGTAACCCTAGACG
CGGTGGATGAGCTGGAGAAGCGCGGTCTAGGAGGAAAAGAGAAGGTTGGC
TCTTTCATCGCAGGGCTACAGGACAAAGACACTGGCGCTTTCATGGGCGA
TGAATGGGGTGAGAGAGATACACGCTTTCTGTATGGCGCGTTTAATGCAC
TCTCCCTTCTTGGGCTTCTTCACACAGTTGATGTGCCCAAAGCCATTTCC
TATGTCCAACAGTGTGAGAACTTGGACGGCGGCTATGGCATCCAGCCTGG
AGCTGAGTCACATGCTGGTCAAATTTTCACTTGCGTAGGAGCTCTGGCAA
TCGCCGGACGACTGGACTTGGTAAACAAGGACCGTCTTGGAGGTTGGCTC
AGCGAAAGACAGGTCGAAAATGGTGGTCTGAATGGAAGGCCCGAGAAACT
GCCCGATGCATGCTATAGCTGGTGGGTTGGTGCTAGCTTGGCTATGATCG
ACAAACTCCACTGGATTGATAGTGGCAAGCTTTCTGCTTTCATCTTGCGC
TGTCAGATGTCCTTAGTTTCGGGTCCTGGTAGGGCTGCTGGGATCGAATC
CAGCTTGAATCTTAGTGTCGAAAGACATGTGGATTACATCAAGAACTTGG
ACAGCTTGTATGCCGAAGGCAATTACACAGAAATATCTGCAACGGTAAGA
TTCGGAGGCTGGGGGTATCGGAGACAGACCAGGCAGCATGGTTGATGTGT
TTCATACGCATTTTGCCATTGCCGGTTTGAGCCTGTTGAAGTTCAATGGC
ATCCAAGAAGTAGATCCTGTTTAAGGAGGGATGAGCTAGAATATTGGCTT
ACAGAACACCTTCGCCTGAATGGGGTGTATTGGGGCTTGACGGCTCTACA
TCTCCTTGGCCGTCCCGATGTCCTTCCTCGTGAAGATACCATCGATTTTG
TTCTCTCGTGTCAACGGGAGAATGGCGGCTTCGGGGCAGCTCCGGGCCAT
GATGCACACATGCTGTACACAGTATCGGCAGTGCAAATTCTCGTAACCCT
AGACGCGGTGGATGAGCTGGAGAAGCGCGGTCTAGGAGGAAAAGAGAAGG
TTGGCTCTTTCATCGCAGGGCTACAGGACAAAGACACTGGCGCTTTCATG
GGCGATGAATGGGGTGAGAGAGATACACGCTTTCTGTATGGCGCGTTTAA
TGCACTCTCCCTTCTTGGGCTTCTTCACACAGTTGATGTGCCCAAAGCCA
TTTCCTATGTCCAACAGTGTGAGAACTTGGACGGCGGCTATGGCATCCAG
CCTGGAGCTGAGTCACATGCTGGTCAAATTTTCACTTGCGTAGGAGCTCT
GGCAATCGCCGGACGACTGGACTTGGTAAACAAGGACCGTCTTGGAGGTT
GGCTCAGCGAAAGACAGGTCGAAAATGGTGGTCTGAATGGAAGGCCCGAG
AAACTGCCCGATGCATGCTATAGCTGGTGGGTTGGTGCTAGCTTGGCTAT
GATCGACAAACTCCACTGGATTGATAGTGGCAAGCTTTCTGCTTTCATCT
TGCGCTGTCAGATGTCCTTAGTTTCGGGTCCTGGTAGGGCTGCTGGGATC
GAATCCAGCTTGAATCTTAGTGTCGAAAGACATGTGGATTACATCAAGAA
CTTGGACAGCTTGTATGCCGAAGGCAATTACACAGAAATATCTGCAACGG
TAAGATTCGGAGGCTGGGGGTATCGGAGACAGACCAGGCAGCATGGTTGA
TGTGTTTCATACGCATTTTGCCATTGCCGGTTTGAGCCTGTTGAAGTTCA
ATGGCATCCAAGAAGTAGATCCTGTTTAAGGAGGGATGAGCTAGAATATT
GGCTTACAGAACACCTTCGCCTGAATGGGGTGTATTGGGGCTTGACGGCT
CTACATCTCCTTGGCCGTCCCGATGTCCTTCCTCGTGAAGATACCATCGA
TTTTGTTCTCTCGTGTCAACGGGAGAATGGCGGCTTCGGGGCAGCTCCGG
GCCATGATGCACACATGCTGTACACAGTATCGGCAGTGCAAATTCTCGTA
ACCCTAGACGCGGTGGATGAGCTGGAGAAGCGCGGTCTAGGAGGAAAAGA
GAAGGTTGGCTCTTTCATCGCAGGGCTACAGGACAAAGACACTGGCGCTT
TCATGGGCGATGAATGGGGTGAGAGAGATACACGCTTTCTGTATGGCGCG
TTTAATGCACTCTCCCTTCTTGGGCTTCTTCACACAGTTGATGTGCCCAA
AGCCATTTCCTATGTCCAACAGTGTGAGAACTTGGACGGCGGCTATGGCA
TCCAGCCTGGAGCTGAGTCACATGCTGGTCAAATTTTCACTTGCGTAGGA
GCTCTGGCAATCGCCGGACGACTGGACTTGGTAAACAAGGACCGTCTTGG
AGGTTGGCTCAGCGAAAGACAGGTCGAAAATGGTGGTCTGAATGGAAGGC
CCGAGAAACTGCCCGATGCATGCTATAGCTGGTGGGTTGGTGCTAGCTTG
GCTATGATCGACAAACTCCACTGGATTGATAGTGGCAAGCTTTCTGCTTT
CATCTTGCGCTGTCAGATGTCCTTAGTTTCGGGTCCTGGTAGGGCTGCTG
GGATCGAATCCAGCTTGAATCTTAGTGTCGAAAGACATGTGGATTACATC
AAGAACTTGGACAGCTTGTATGCCGAAGGCAATTACACAGAAATATCTGC
AACGGTAAGATTCGGAGGCTGGGGGTATCGGAGACAGACCAGGCAGCATG
GTTGATGTGTTTCATACGCATTTTGCCATTGCCGGTTTGAGCCTGTTGAA
GTTCAATGGCATCCAAGAAGTAGATCCTGTTTAAGGAGGGATGAGCTAGA
ATATTGGCTTACAGAACACCTTCGCCTGAATGGGGTGTATTGGGGCTTGA
CGGCTCTACATCTCCTTGGCCGTCCCGATGTCCTTCCTCGTGAAGATACC
ATCGATTTTGTTCTCTCGTGTCAACGGGAGAATGGCGGCTTCGGGGCAGC
TCCGGGCCATGATGCACACATGCTGTACACAGTATCGGCAGTGCAAATTC
TCGTAACCCTAGACGCGGTGGATGAGCTGGAGAAGCGCGGTCTAGGAGGA
AAAGAGAAGGTTGGCTCTTTCATCGCAGGGCTACAGGACAAAGACACTGG
CGCTTTCATGGGCGATGAATGGGGTGAGAGAGATACACGCTTTCTGTATG
GCGCGTTTAATGCACTCTCCCTTCTTGGGCTTCTTCACACAGTTGATGTG
CCCAAAGCCATTTCCTATGTCCAACAGTGTGAGAACTTGGACGGCGGCTA
TGGCATCCAGCCTGGAGCTGAGTCACATGCTGGTCAAATTTTCACTTGCG
TAGGAGCTCTGGCAATCGCCGGACGACTGGACTTGGTAAACAAGGACCGT
CTTGGAGGTTGGCTCAGCGAAAGACAGGTCGAAAATGGTGGTCTGAATGG
AAGGCCCGAGAAACTGCCCGATGCATGCTATAGCTGGTGGGTTGGTGCTA
GCTTGGCTATGATCGACAAACTCCACTGGATTGATAGTGGCAAGCTTTCT
GCTTTCATCTTGCGCTGTCAGATGTCCTTAGTTTCGGGTCCTGGTAGGGC
TGCTGGGATCGAATCCAGCTTGAATCTTAGTGTCGAAAGACATGTGGATT
ACATCAAGAACTTGGACAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0018344protein geranylgeranylation
Vocabulary: Molecular Function
TermDefinition
GO:0004663Rab geranylgeranyltransferase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005511ATCC10864_005511Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005511-T1ATCC10864_005511-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005511-T1.cdsATCC10864_005511-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005511-T1.exon4ATCC10864_005511-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005511-T1.exon3ATCC10864_005511-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005511-T1.exon2ATCC10864_005511-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005511-T1.exon1ATCC10864_005511-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001330
PFAMPF00432
InterProIPR008930
InterProIPR026873
Properties
Property NameValue
NoteBUSCO:EOG09263G3M
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000153supercontigMCQH01000153:152227..153411 -
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