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ATCC10864_005527-T1, ATCC10864_005527-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005527-T1
Unique NameATCC10864_005527-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000155:6316..7324+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005527-T1 ID=ATCC10864_005527-T1|Name=ATCC10864_005527-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1009bp|location=Sequence derived from alignment at MCQH01000155:6316..7324+ (Aspergillus niger ATCC 10864)
ATGGATTCGAAAGCCACTCTGGGCAGTATCCAGAAAGCCGTCTGGGCCGG
AAAGCTGCCCTTACATATCACCTTGGCCCCATCAGAGAGCCGTACATTTG
ACCAGACAGATCCATACCTAGTACGTCCTCTTCTAGTACCTGATGAACTA
GAGCTAACTCACTCAGATCTCCTGTTCTCGCATATCATACTTACCATCGC
TTCTCCCGAGGCTGAGAGCTTTTTTCGCTTCCTCCTTAATTGACCCCAGT
TCCCGCCCGCACGAAGGCTGGTTCTCCTTCGAGGGCGTTCCGTTAAAATG
GCACTACCCAGTTGGCCTCCTTTATGACCTTTATGCCGGAGCAGATCCAG
CCTCTAAGGGAGGTGCTGAAACTGACTTGGTATCCACAACGGATGAAGAC
CCGTTACCATGGCGTCTAGTCGTGCATTTTAGCGACTGGCCTGATGAAGA
ACTCGTCCGACTTGATGCAGATGGGATAGTGATGCACGATGCTTTTATCA
ATAGTGTCAAAGAAGCAGATTTCCTGAGGAATGGTACCGCCAAAGGAATC
ATGACCCTTTCCAGGGAGGATTCGGCGGGGCTTTGGCAGTCAGTGAGAGA
TGGTACGTTATTTTATTCACTTGGACTTGAACAAAGAGGGAAGTGCTTAC
CATGCACCCAGTGGACCTTTCAAACTTCCAGCGAATATCCAACATTCTCC
TACCACCCCAGTCACAACCGTTCCGCAACATCCCTGTACGGTTCTTTCTC
CCCCTTCCCCCGGACTCAGACTCGCCCTCTCTCAAAGTAGTCCAGTCTCC
TATTCCACCAACCATTCAGCCAACATCCGGACCCGGCGCCAGTGTCATGG
CAAGTCAATCCATATTGAGTACGTCCAGGGGCCCTCAACCGCAGACCATA
GGGTCAGCACTGCACTCACTACTACCGCATTTATTTCCTAGTCGGAGGAC
CCCTGTCCTGGCGAAGCCTGTACTGCATGGTGCCGCGGTGCCAATGGGTG
CACCACTAG
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Coding sequence (CDS) from alignment at MCQH01000155:6316..7324+

>ATCC10864_005527-T1 ID=ATCC10864_005527-T1|Name=ATCC10864_005527-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3324bp|location=Sequence derived from alignment at MCQH01000155:6316..7324+ (Aspergillus niger ATCC 10864)
ATGGATTCGAAAGCCACTCTGGGCAGTATCCAGAAAGCCGTCTGGGCCGG
AAAGCTGCCCTTACATATCACCTTGGCCCCATCAGAGAGCCGTACATTTG
ACCAGACAGATCCATACCTAATCTCCTGTTCTCGCATATCATACTTACCA
TCGCTTCTCCCGAGGCTGAGAGCTTTTTTCGCTTCCTCCTTAATTGACCC
CAGTTCCCGCCCGCACGAAGGCTGGTTCTCCTTCGAGGGCGTTCCGTTAA
AATGGCACTACCCAGTTGGCCTCCTTTATGACCTTTATGCCGGAGCAGAT
CCAGCCTCTAAGGGAGGTGCTGAAACTGACTTGGTATCCACAACGGATGA
AGACCCGTTACCATGGCGTCTAGTCGTGCATTTTAGCGACTGGCCTGATG
AAGAACTCGTCCGACTTGATGCAGATGGGATAGTGATGCACGATGCTTTT
ATCAATAGTGTCAAAGAAGCAGATTTCCTGAGGAATGGTACCGCCAAAGG
AATCATGACCCTTTCCAGGGAGGATTCGGCGGGGCTTTGGCAGTCAGTGA
GAGATGTGGACCTTTCAAACTTCCAGCGAATATCCAACATTCTCCTACCA
CCCCAGTCACAACCGTTCCGCAACATCCCTGTACGGTTCTTTCTCCCCCT
TCCCCCGGACTCAGACTCGCCCTCTCTCAAAGTAGTCCAGTCTCCTATTC
CACCAACCATTCAGCCAACATCCGGACCCGGCGCCAGTGTCATGGCAAGT
CAATCCATATTGATCGGAGGACCCCTGTCCTGGCGAAGCCTGTACTGCAT
GGTGCCGCGGTGCCAATGGGTGCACCACTAGATGGATTCGAAAGCCACTC
TGGGCAGTATCCAGAAAGCCGTCTGGGCCGGAAAGCTGCCCTTACATATC
ACCTTGGCCCCATCAGAGAGCCGTACATTTGACCAGACAGATCCATACCT
AATCTCCTGTTCTCGCATATCATACTTACCATCGCTTCTCCCGAGGCTGA
GAGCTTTTTTCGCTTCCTCCTTAATTGACCCCAGTTCCCGCCCGCACGAA
GGCTGGTTCTCCTTCGAGGGCGTTCCGTTAAAATGGCACTACCCAGTTGG
CCTCCTTTATGACCTTTATGCCGGAGCAGATCCAGCCTCTAAGGGAGGTG
CTGAAACTGACTTGGTATCCACAACGGATGAAGACCCGTTACCATGGCGT
CTAGTCGTGCATTTTAGCGACTGGCCTGATGAAGAACTCGTCCGACTTGA
TGCAGATGGGATAGTGATGCACGATGCTTTTATCAATAGTGTCAAAGAAG
CAGATTTCCTGAGGAATGGTACCGCCAAAGGAATCATGACCCTTTCCAGG
GAGGATTCGGCGGGGCTTTGGCAGTCAGTGAGAGATGTGGACCTTTCAAA
CTTCCAGCGAATATCCAACATTCTCCTACCACCCCAGTCACAACCGTTCC
GCAACATCCCTGTACGGTTCTTTCTCCCCCTTCCCCCGGACTCAGACTCG
CCCTCTCTCAAAGTAGTCCAGTCTCCTATTCCACCAACCATTCAGCCAAC
ATCCGGACCCGGCGCCAGTGTCATGGCAAGTCAATCCATATTGATCGGAG
GACCCCTGTCCTGGCGAAGCCTGTACTGCATGGTGCCGCGGTGCCAATGG
GTGCACCACTAGATGGATTCGAAAGCCACTCTGGGCAGTATCCAGAAAGC
CGTCTGGGCCGGAAAGCTGCCCTTACATATCACCTTGGCCCCATCAGAGA
GCCGTACATTTGACCAGACAGATCCATACCTAATCTCCTGTTCTCGCATA
TCATACTTACCATCGCTTCTCCCGAGGCTGAGAGCTTTTTTCGCTTCCTC
CTTAATTGACCCCAGTTCCCGCCCGCACGAAGGCTGGTTCTCCTTCGAGG
GCGTTCCGTTAAAATGGCACTACCCAGTTGGCCTCCTTTATGACCTTTAT
GCCGGAGCAGATCCAGCCTCTAAGGGAGGTGCTGAAACTGACTTGGTATC
CACAACGGATGAAGACCCGTTACCATGGCGTCTAGTCGTGCATTTTAGCG
ACTGGCCTGATGAAGAACTCGTCCGACTTGATGCAGATGGGATAGTGATG
CACGATGCTTTTATCAATAGTGTCAAAGAAGCAGATTTCCTGAGGAATGG
TACCGCCAAAGGAATCATGACCCTTTCCAGGGAGGATTCGGCGGGGCTTT
GGCAGTCAGTGAGAGATGTGGACCTTTCAAACTTCCAGCGAATATCCAAC
ATTCTCCTACCACCCCAGTCACAACCGTTCCGCAACATCCCTGTACGGTT
CTTTCTCCCCCTTCCCCCGGACTCAGACTCGCCCTCTCTCAAAGTAGTCC
AGTCTCCTATTCCACCAACCATTCAGCCAACATCCGGACCCGGCGCCAGT
GTCATGGCAAGTCAATCCATATTGATCGGAGGACCCCTGTCCTGGCGAAG
CCTGTACTGCATGGTGCCGCGGTGCCAATGGGTGCACCACTAGATGGATT
CGAAAGCCACTCTGGGCAGTATCCAGAAAGCCGTCTGGGCCGGAAAGCTG
CCCTTACATATCACCTTGGCCCCATCAGAGAGCCGTACATTTGACCAGAC
AGATCCATACCTAATCTCCTGTTCTCGCATATCATACTTACCATCGCTTC
TCCCGAGGCTGAGAGCTTTTTTCGCTTCCTCCTTAATTGACCCCAGTTCC
CGCCCGCACGAAGGCTGGTTCTCCTTCGAGGGCGTTCCGTTAAAATGGCA
CTACCCAGTTGGCCTCCTTTATGACCTTTATGCCGGAGCAGATCCAGCCT
CTAAGGGAGGTGCTGAAACTGACTTGGTATCCACAACGGATGAAGACCCG
TTACCATGGCGTCTAGTCGTGCATTTTAGCGACTGGCCTGATGAAGAACT
CGTCCGACTTGATGCAGATGGGATAGTGATGCACGATGCTTTTATCAATA
GTGTCAAAGAAGCAGATTTCCTGAGGAATGGTACCGCCAAAGGAATCATG
ACCCTTTCCAGGGAGGATTCGGCGGGGCTTTGGCAGTCAGTGAGAGATGT
GGACCTTTCAAACTTCCAGCGAATATCCAACATTCTCCTACCACCCCAGT
CACAACCGTTCCGCAACATCCCTGTACGGTTCTTTCTCCCCCTTCCCCCG
GACTCAGACTCGCCCTCTCTCAAAGTAGTCCAGTCTCCTATTCCACCAAC
CATTCAGCCAACATCCGGACCCGGCGCCAGTGTCATGGCAAGTCAATCCA
TATTGATCGGAGGACCCCTGTCCTGGCGAAGCCTGTACTGCATGGTGCCG
CGGTGCCAATGGGTGCACCACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006914autophagy
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG5ATCC10864_005527Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005527-T1.exon1ATCC10864_005527-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005527-T1.exon2ATCC10864_005527-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005527-T1.exon3ATCC10864_005527-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005527-T1.exon4ATCC10864_005527-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005527-T1.cdsATCC10864_005527-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005527-T1ATCC10864_005527-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR042526
PFAMPF04106
InterProIPR042527
InterProIPR007239
Properties
Property NameValue
Productautophagy protein 5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000155supercontigMCQH01000155:6316..7324 +
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