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ATCC10864_005535-T1, ATCC10864_005535-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005535-T1
Unique NameATCC10864_005535-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000155:48165..49588+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005535-T1 ID=ATCC10864_005535-T1|Name=ATCC10864_005535-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1424bp|location=Sequence derived from alignment at MCQH01000155:48165..49588+ (Aspergillus niger ATCC 10864)
ATGTTGTTCCGCGCTGCGGTCCGTCAGTCCGCGCCCTTGAGGCGTCAGGC
CCTCACTCCTCTTGCTCGTCGCTCCGTCACCACCGACGCCGCCTCGTCGC
ATGCTGAAAATGTCCCCCAGGTTCGTTGAGAGCTCCCTGGATATCCCGGA
TTGACCTCCGCAATGGCCCTGGCTAATGCGATTTCCATCTATCTACAGGA
GGATGACAAGCCCTTCACTGTCCGCCTCTCCGACGAGAGCTTCGAGACCT
ACGAGATCGACCCTCCCCCGTACACCCTGGAGATCACCAAGAAGGAGCTC
AAGCAGATGTACTACGACATGGTTTCGATGAGGTATGGCCATCGTTTGGC
CCTTTGCTTTTTCTTTCCACAAGCCTCATGCAGAATCTAATCTATCGCTC
AGACGCATGGAGATGGCCGCCGACCGTCTTTACAAGGAGAAGAAGATCAG
AGGTTTCTGCCACTTGTCTACCGGTCAGGAAGCCGTCGCCACCGGTATCG
AGCACGCTATCACCCGCGACGACAAGGTCATCACTGCCTACCGTTGCCAC
GGTTTCGCCATGATGCGCGGTGGTACCGTCCGCTCCATCATCGGTGAGCT
GCTCGGTCGCCGTGAGGGTATCGCCTACGGAAAGGGTGGTTCCATGCACA
TGTTCGCCCCCAACTTCTACGGCGGTAACGGTATCGTCGGTGCCCAGGTC
CCCGTCGGTGCTGGTCTCGCTTTCGCCCAGCAGTACAACGAGGAGCCCAC
CACCAGTATCGTCCTCTACGGTGACGGTGCCTCCAACCAGGGTCAGGTCT
TCGAGGCCTTCAACATGGCCAAGCTGTGGAAGCTCCCCGTTCTGTTCGGT
TGTGAGAGTAAGTCATAGTCCTCCGCCACTCCATACAAGACAGCCAAAGC
TAATTCTTTTTCTACTAGACAACAAGTACGGTATGGGTACCTCCGCCGCT
CGCTCCTCCGCCTTGACCGAGTACTACAAGCGTGGTCAGTACATCCCTGG
TATCAAGGTCAACGGCATGGACGTCCTGGCCACCAAGGCCGCCGTCAAGT
ACGGTAAGGACTGGGCCGTGGCCGGCAACGGCCCCCTGGTCTACGAGTAC
GTCACCTACCGTTACGGTGGTCACTCCATGTCCGACCCCGGTACCACCTA
CCGTAGCCGTGAGGAGATCCAGCGCATGCGCAGCACCAACGACCCCATCG
CCGGTCTCAAGCAGAAGATCCTCGACTGGAACGTCTGCTCCGAGGACGAG
CTCAAGTCCCTCGACAAGGCCGCTCGTGCCCACGTCGACGAGGAGGTCGC
CATCGCCGAGAAGATGCCCGCTCCCGAGAACACCTCCCGCATTCTCTTCG
AGGACATCTACGTCCGTGGCTCCGAGCCCAAGTGGATGCGTGGTCGCACT
GTCGACGAGACCTTCTACTACTAG
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Coding sequence (CDS) from alignment at MCQH01000155:48165..49588+

>ATCC10864_005535-T1 ID=ATCC10864_005535-T1|Name=ATCC10864_005535-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4860bp|location=Sequence derived from alignment at MCQH01000155:48165..49588+ (Aspergillus niger ATCC 10864)
ATGTTGTTCCGCGCTGCGGTCCGTCAGTCCGCGCCCTTGAGGCGTCAGGC
CCTCACTCCTCTTGCTCGTCGCTCCGTCACCACCGACGCCGCCTCGTCGC
ATGCTGAAAATGTCCCCCAGGAGGATGACAAGCCCTTCACTGTCCGCCTC
TCCGACGAGAGCTTCGAGACCTACGAGATCGACCCTCCCCCGTACACCCT
GGAGATCACCAAGAAGGAGCTCAAGCAGATGTACTACGACATGGTTTCGA
TGAGACGCATGGAGATGGCCGCCGACCGTCTTTACAAGGAGAAGAAGATC
AGAGGTTTCTGCCACTTGTCTACCGGTCAGGAAGCCGTCGCCACCGGTAT
CGAGCACGCTATCACCCGCGACGACAAGGTCATCACTGCCTACCGTTGCC
ACGGTTTCGCCATGATGCGCGGTGGTACCGTCCGCTCCATCATCGGTGAG
CTGCTCGGTCGCCGTGAGGGTATCGCCTACGGAAAGGGTGGTTCCATGCA
CATGTTCGCCCCCAACTTCTACGGCGGTAACGGTATCGTCGGTGCCCAGG
TCCCCGTCGGTGCTGGTCTCGCTTTCGCCCAGCAGTACAACGAGGAGCCC
ACCACCAGTATCGTCCTCTACGGTGACGGTGCCTCCAACCAGGGTCAGGT
CTTCGAGGCCTTCAACATGGCCAAGCTGTGGAAGCTCCCCGTTCTGTTCG
GTTGTGAGAACAACAAGTACGGTATGGGTACCTCCGCCGCTCGCTCCTCC
GCCTTGACCGAGTACTACAAGCGTGGTCAGTACATCCCTGGTATCAAGGT
CAACGGCATGGACGTCCTGGCCACCAAGGCCGCCGTCAAGTACGGTAAGG
ACTGGGCCGTGGCCGGCAACGGCCCCCTGGTCTACGAGTACGTCACCTAC
CGTTACGGTGGTCACTCCATGTCCGACCCCGGTACCACCTACCGTAGCCG
TGAGGAGATCCAGCGCATGCGCAGCACCAACGACCCCATCGCCGGTCTCA
AGCAGAAGATCCTCGACTGGAACGTCTGCTCCGAGGACGAGCTCAAGTCC
CTCGACAAGGCCGCTCGTGCCCACGTCGACGAGGAGGTCGCCATCGCCGA
GAAGATGCCCGCTCCCGAGAACACCTCCCGCATTCTCTTCGAGGACATCT
ACGTCCGTGGCTCCGAGCCCAAGTGGATGCGTGGTCGCACTGTCGACGAG
ACCTTCTACTACTAGATGTTGTTCCGCGCTGCGGTCCGTCAGTCCGCGCC
CTTGAGGCGTCAGGCCCTCACTCCTCTTGCTCGTCGCTCCGTCACCACCG
ACGCCGCCTCGTCGCATGCTGAAAATGTCCCCCAGGAGGATGACAAGCCC
TTCACTGTCCGCCTCTCCGACGAGAGCTTCGAGACCTACGAGATCGACCC
TCCCCCGTACACCCTGGAGATCACCAAGAAGGAGCTCAAGCAGATGTACT
ACGACATGGTTTCGATGAGACGCATGGAGATGGCCGCCGACCGTCTTTAC
AAGGAGAAGAAGATCAGAGGTTTCTGCCACTTGTCTACCGGTCAGGAAGC
CGTCGCCACCGGTATCGAGCACGCTATCACCCGCGACGACAAGGTCATCA
CTGCCTACCGTTGCCACGGTTTCGCCATGATGCGCGGTGGTACCGTCCGC
TCCATCATCGGTGAGCTGCTCGGTCGCCGTGAGGGTATCGCCTACGGAAA
GGGTGGTTCCATGCACATGTTCGCCCCCAACTTCTACGGCGGTAACGGTA
TCGTCGGTGCCCAGGTCCCCGTCGGTGCTGGTCTCGCTTTCGCCCAGCAG
TACAACGAGGAGCCCACCACCAGTATCGTCCTCTACGGTGACGGTGCCTC
CAACCAGGGTCAGGTCTTCGAGGCCTTCAACATGGCCAAGCTGTGGAAGC
TCCCCGTTCTGTTCGGTTGTGAGAACAACAAGTACGGTATGGGTACCTCC
GCCGCTCGCTCCTCCGCCTTGACCGAGTACTACAAGCGTGGTCAGTACAT
CCCTGGTATCAAGGTCAACGGCATGGACGTCCTGGCCACCAAGGCCGCCG
TCAAGTACGGTAAGGACTGGGCCGTGGCCGGCAACGGCCCCCTGGTCTAC
GAGTACGTCACCTACCGTTACGGTGGTCACTCCATGTCCGACCCCGGTAC
CACCTACCGTAGCCGTGAGGAGATCCAGCGCATGCGCAGCACCAACGACC
CCATCGCCGGTCTCAAGCAGAAGATCCTCGACTGGAACGTCTGCTCCGAG
GACGAGCTCAAGTCCCTCGACAAGGCCGCTCGTGCCCACGTCGACGAGGA
GGTCGCCATCGCCGAGAAGATGCCCGCTCCCGAGAACACCTCCCGCATTC
TCTTCGAGGACATCTACGTCCGTGGCTCCGAGCCCAAGTGGATGCGTGGT
CGCACTGTCGACGAGACCTTCTACTACTAGATGTTGTTCCGCGCTGCGGT
CCGTCAGTCCGCGCCCTTGAGGCGTCAGGCCCTCACTCCTCTTGCTCGTC
GCTCCGTCACCACCGACGCCGCCTCGTCGCATGCTGAAAATGTCCCCCAG
GAGGATGACAAGCCCTTCACTGTCCGCCTCTCCGACGAGAGCTTCGAGAC
CTACGAGATCGACCCTCCCCCGTACACCCTGGAGATCACCAAGAAGGAGC
TCAAGCAGATGTACTACGACATGGTTTCGATGAGACGCATGGAGATGGCC
GCCGACCGTCTTTACAAGGAGAAGAAGATCAGAGGTTTCTGCCACTTGTC
TACCGGTCAGGAAGCCGTCGCCACCGGTATCGAGCACGCTATCACCCGCG
ACGACAAGGTCATCACTGCCTACCGTTGCCACGGTTTCGCCATGATGCGC
GGTGGTACCGTCCGCTCCATCATCGGTGAGCTGCTCGGTCGCCGTGAGGG
TATCGCCTACGGAAAGGGTGGTTCCATGCACATGTTCGCCCCCAACTTCT
ACGGCGGTAACGGTATCGTCGGTGCCCAGGTCCCCGTCGGTGCTGGTCTC
GCTTTCGCCCAGCAGTACAACGAGGAGCCCACCACCAGTATCGTCCTCTA
CGGTGACGGTGCCTCCAACCAGGGTCAGGTCTTCGAGGCCTTCAACATGG
CCAAGCTGTGGAAGCTCCCCGTTCTGTTCGGTTGTGAGAACAACAAGTAC
GGTATGGGTACCTCCGCCGCTCGCTCCTCCGCCTTGACCGAGTACTACAA
GCGTGGTCAGTACATCCCTGGTATCAAGGTCAACGGCATGGACGTCCTGG
CCACCAAGGCCGCCGTCAAGTACGGTAAGGACTGGGCCGTGGCCGGCAAC
GGCCCCCTGGTCTACGAGTACGTCACCTACCGTTACGGTGGTCACTCCAT
GTCCGACCCCGGTACCACCTACCGTAGCCGTGAGGAGATCCAGCGCATGC
GCAGCACCAACGACCCCATCGCCGGTCTCAAGCAGAAGATCCTCGACTGG
AACGTCTGCTCCGAGGACGAGCTCAAGTCCCTCGACAAGGCCGCTCGTGC
CCACGTCGACGAGGAGGTCGCCATCGCCGAGAAGATGCCCGCTCCCGAGA
ACACCTCCCGCATTCTCTTCGAGGACATCTACGTCCGTGGCTCCGAGCCC
AAGTGGATGCGTGGTCGCACTGTCGACGAGACCTTCTACTACTAGATGTT
GTTCCGCGCTGCGGTCCGTCAGTCCGCGCCCTTGAGGCGTCAGGCCCTCA
CTCCTCTTGCTCGTCGCTCCGTCACCACCGACGCCGCCTCGTCGCATGCT
GAAAATGTCCCCCAGGAGGATGACAAGCCCTTCACTGTCCGCCTCTCCGA
CGAGAGCTTCGAGACCTACGAGATCGACCCTCCCCCGTACACCCTGGAGA
TCACCAAGAAGGAGCTCAAGCAGATGTACTACGACATGGTTTCGATGAGA
CGCATGGAGATGGCCGCCGACCGTCTTTACAAGGAGAAGAAGATCAGAGG
TTTCTGCCACTTGTCTACCGGTCAGGAAGCCGTCGCCACCGGTATCGAGC
ACGCTATCACCCGCGACGACAAGGTCATCACTGCCTACCGTTGCCACGGT
TTCGCCATGATGCGCGGTGGTACCGTCCGCTCCATCATCGGTGAGCTGCT
CGGTCGCCGTGAGGGTATCGCCTACGGAAAGGGTGGTTCCATGCACATGT
TCGCCCCCAACTTCTACGGCGGTAACGGTATCGTCGGTGCCCAGGTCCCC
GTCGGTGCTGGTCTCGCTTTCGCCCAGCAGTACAACGAGGAGCCCACCAC
CAGTATCGTCCTCTACGGTGACGGTGCCTCCAACCAGGGTCAGGTCTTCG
AGGCCTTCAACATGGCCAAGCTGTGGAAGCTCCCCGTTCTGTTCGGTTGT
GAGAACAACAAGTACGGTATGGGTACCTCCGCCGCTCGCTCCTCCGCCTT
GACCGAGTACTACAAGCGTGGTCAGTACATCCCTGGTATCAAGGTCAACG
GCATGGACGTCCTGGCCACCAAGGCCGCCGTCAAGTACGGTAAGGACTGG
GCCGTGGCCGGCAACGGCCCCCTGGTCTACGAGTACGTCACCTACCGTTA
CGGTGGTCACTCCATGTCCGACCCCGGTACCACCTACCGTAGCCGTGAGG
AGATCCAGCGCATGCGCAGCACCAACGACCCCATCGCCGGTCTCAAGCAG
AAGATCCTCGACTGGAACGTCTGCTCCGAGGACGAGCTCAAGTCCCTCGA
CAAGGCCGCTCGTGCCCACGTCGACGAGGAGGTCGCCATCGCCGAGAAGA
TGCCCGCTCCCGAGAACACCTCCCGCATTCTCTTCGAGGACATCTACGTC
CGTGGCTCCGAGCCCAAGTGGATGCGTGGTCGCACTGTCGACGAGACCTT
CTACTACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0043231intracellular membrane-bounded organelle
Vocabulary: Molecular Function
TermDefinition
GO:0004739pyruvate dehydrogenase (acetyl-transferring) activity
GO:0016624oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0006086acetyl-CoA biosynthetic process from pyruvate
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PDA1ATCC10864_005535Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005535-T1.exon1ATCC10864_005535-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005535-T1.exon2ATCC10864_005535-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005535-T1.exon3ATCC10864_005535-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005535-T1.exon4ATCC10864_005535-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005535-T1.cdsATCC10864_005535-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005535-T1ATCC10864_005535-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00676
InterProIPR017597
InterProIPR001017
InterProIPR029061
Properties
Property NameValue
NoteBUSCO:EOG09262Q8D
Productalpha subunit of pyruvate dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000155supercontigMCQH01000155:48165..49588 +
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