You are here

Home

ATCC10864_005537-T1, ATCC10864_005537-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005537-T1
Unique NameATCC10864_005537-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000155:52867..54423-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005537-T1 ID=ATCC10864_005537-T1|Name=ATCC10864_005537-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1557bp|location=Sequence derived from alignment at MCQH01000155:52867..54423- (Aspergillus niger ATCC 10864)
ATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCGGTAAGGACATTTCT
TTCTTTTTTCTTGCTCTGTCTCCTTGCTCATCGCGCCGCAATTGCTAATT
CTGGTATGCTTTGCTTAGAAAGTCCGGCAATCATGGAGCAAATGGAACCT
ATATAACATGAAGCGGTTCTCCGTCAAGAACCCCATGTTCCGAACTCATT
TCCAGCAAAAATGGGATGCCAAGTCGATAGCCCGTGGATATCATGGCGAA
CAAGTCTCCGAGAAGCACTGGGTGCGCATGTTTTCTCCCCGCATTCGTAG
CGTGGTGCCCATGGATCCCGCCAAATTGGCCAAAGACGATGGTTCTGCCT
TGTCTGCCGGCCGTGGTATGGGTGTTGAGTTGCGTTCTGACACAGCCGCG
CATCTTAAACTCTCAAAATACGAGAAAGCCGACGCCGACCAACTGGAAAG
GCCTTTTCCCTATACACAGGCGACTTTTGCTCCCCTAGAGCGCCGGCTGG
ATGTGGCCGTCTTCCGGGCTATGTTCGCTAGCAGTACGAGGCAGGCGCGG
CAATTTGTCATTCATGGAGCGGTCACTGTCAATGGAAAGAAGGTGAGTGT
GCCTGGGACGCTGCATGGTCCTTTTCATTTAAGCGTTGCCATCGAAAGCT
GATCGGTTACGTTTGACAGATGAGATACCCCGGTTACCTGCTCAACCCTG
GTGATCTTTTCCAGGTCGAACCCGAGCGTGTCATGTTTGCCACCGGTGCT
CCAAAGGACAAGTACGACCGGCGCGCGGCTCGTGTTGCTGAGAAGGAGGC
AGAGAAGGAGGCGGAGAAAAAGGCCGAGGAAGCCGAGGAAGCCAAGGAAG
AGAGTGAGGCCAAGGAGGAGGATAAGCAAGAGGTCCAGTCCCCGCGCCAG
ACCTTGCAGGCTATGCTGTCGCAGGCCAAGAACATCATGGCCGACAGCAA
GTCGGTGCTTCCCGCCAAGCGGAAGCAGGAGCTGCGTGGATTCCAGAAGG
CCGTCCGTCGCGTGCTGTCTCGCTCTGATTCAAACGTCCTCGCTGACAAC
CTGGAGGCTCAGTTTTCCGAGCTGACTCTGCTGCTCAAGGCCAAGAAGGC
AGAGAAGACGAAGAAGTCGGGCAACAAGGAAAGACAGGATACCACATCTG
CCAACTCCGAGAAGTCCACCGACACCAAGGCTGCTACTGAGGTAGACAGC
GAGACCCAGCCCGGCGATAAGCTGTCCGAGGCATTCCGCCAGGCTGCTGA
GAACCCTGAACAGGAGGTGGATACGTCCGAGTTGACCGATGAGGAGTTCA
AGATTCTTCGTCGTGCCCTTATCCAGATGCGTGATAACCCGATCGATCAT
TCGAAGCCGTACGCTACGCCCTGGCGGCCGCGGGACTTCATGAGCGCCTT
TGCCACGATCCCTCGCTACCTGGAAGTGAACCCTAAGGCTTGTGCGGCCG
TCTACCTGCGCCACCCCGTTGTTCGTCCGGGCTTGTCGGAGGTTCCATCG
CCCTTCAACCTTGCGACTGGAGCGCTGGCATACCACTGGTACCTGAGACG
GCGGTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000155:52867..54423-

>ATCC10864_005537-T1 ID=ATCC10864_005537-T1|Name=ATCC10864_005537-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4194bp|location=Sequence derived from alignment at MCQH01000155:52867..54423- (Aspergillus niger ATCC 10864)
ATGAGATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCCAGGTCGA
ACCCGAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAGTACGACC
GGCGCGCGGCTCGTGTTGCTGAGAAGGAGGCAGAGAAGGAGGCGGAGAAA
AAGGCCGAGGAAGCCGAGGAAGCCAAGGAAGAGAGTGAGGCCAAGGAGGA
GGATAAGCAAGAGGTCCAGTCCCCGCGCCAGACCTTGCAGGCTATGCTGT
CGCAGGCCAAGAACATCATGGCCGACAGCAAGTCGGTGCTTCCCGCCAAG
CGGAAGCAGGAGCTGCGTGGATTCCAGAAGGCCGTCCGTCGCGTGCTGTC
TCGCTCTGATTCAAACGTCCTCGCTGACAACCTGGAGGCTCAGTTTTCCG
AGCTGACTCTGCTGCTCAAGGCCAAGAAGGCAGAGAAGACGAAGAAGTCG
GGCAACAAGGAAAGACAGGATACCACATCTGCCAACTCCGAGAAGTCCAC
CGACACCAAGGCTGCTACTGAGGTAGACAGCGAGACCCAGCCCGGCGATA
AGCTGTCCGAGGCATTCCGCCAGGCTGCTGAGAACCCTGAACAGGAGGTG
GATACGTCCGAGTTGACCGATGAGGAGTTCAAGATTCTTCGTCGTGCCCT
TATCCAGATGCGTGATAACCCGATCGATCATTCGAAGCCGTACGCTACGC
CCTGGCGGCCGCGGGACTTCATGAGCGCCTTTGCCACGATCCCTCGCTAC
CTGGAAGTGAACCCTAAGGCTTGTGCGGCCGTCTACCTGCGCCACCCCGT
TGTTCGTCCGGGCTTGTCGGAGGTTCCATCGCCCTTCAACCTTGCGACTG
GAGCGCTGGCATACCACTGGTACCTGAGACGGCGGTAGAAAGTCCGGCAA
TCATGGAGCAAATGGAACCTATATAACATGAAGCGGTTCTCCGTCAAGAA
CCCCATGTTCCGAACTCATTTCCAGCAAAAATGGGATGCCAAGTCGATAG
CCCGTGGATATCATGGCGAACAAGTCTCCGAGAAGCACTGGGTGCGCATG
TTTTCTCCCCGCATTCGTAGCGTGGTGCCCATGGATCCCGCCAAATTGGC
CAAAGACGATGGTTCTGCCTTGTCTGCCGGCCGTGGTATGGGTGTTGAGT
TGCGTTCTGACACAGCCGCGCATCTTAAACTCTCAAAATACGAGAAAGCC
GACGCCGACCAACTGGAAAGGCCTTTTCCCTATACACAGGCGACTTTTGC
TCCCCTAGAGCGCCGGCTGGATGTGGCCGTCTTCCGGGCTATGTTCGCTA
GCAGTACGAGGCAGGCGCGGCAATTTGTCATTCATGGAGCGGTCACTGTC
AATGGAAAGAAGATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCGAT
GAGATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCCAGGTCGAAC
CCGAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAGTACGACCGG
CGCGCGGCTCGTGTTGCTGAGAAGGAGGCAGAGAAGGAGGCGGAGAAAAA
GGCCGAGGAAGCCGAGGAAGCCAAGGAAGAGAGTGAGGCCAAGGAGGAGG
ATAAGCAAGAGGTCCAGTCCCCGCGCCAGACCTTGCAGGCTATGCTGTCG
CAGGCCAAGAACATCATGGCCGACAGCAAGTCGGTGCTTCCCGCCAAGCG
GAAGCAGGAGCTGCGTGGATTCCAGAAGGCCGTCCGTCGCGTGCTGTCTC
GCTCTGATTCAAACGTCCTCGCTGACAACCTGGAGGCTCAGTTTTCCGAG
CTGACTCTGCTGCTCAAGGCCAAGAAGGCAGAGAAGACGAAGAAGTCGGG
CAACAAGGAAAGACAGGATACCACATCTGCCAACTCCGAGAAGTCCACCG
ACACCAAGGCTGCTACTGAGGTAGACAGCGAGACCCAGCCCGGCGATAAG
CTGTCCGAGGCATTCCGCCAGGCTGCTGAGAACCCTGAACAGGAGGTGGA
TACGTCCGAGTTGACCGATGAGGAGTTCAAGATTCTTCGTCGTGCCCTTA
TCCAGATGCGTGATAACCCGATCGATCATTCGAAGCCGTACGCTACGCCC
TGGCGGCCGCGGGACTTCATGAGCGCCTTTGCCACGATCCCTCGCTACCT
GGAAGTGAACCCTAAGGCTTGTGCGGCCGTCTACCTGCGCCACCCCGTTG
TTCGTCCGGGCTTGTCGGAGGTTCCATCGCCCTTCAACCTTGCGACTGGA
GCGCTGGCATACCACTGGTACCTGAGACGGCGGTAGAAAGTCCGGCAATC
ATGGAGCAAATGGAACCTATATAACATGAAGCGGTTCTCCGTCAAGAACC
CCATGTTCCGAACTCATTTCCAGCAAAAATGGGATGCCAAGTCGATAGCC
CGTGGATATCATGGCGAACAAGTCTCCGAGAAGCACTGGGTGCGCATGTT
TTCTCCCCGCATTCGTAGCGTGGTGCCCATGGATCCCGCCAAATTGGCCA
AAGACGATGGTTCTGCCTTGTCTGCCGGCCGTGGTATGGGTGTTGAGTTG
CGTTCTGACACAGCCGCGCATCTTAAACTCTCAAAATACGAGAAAGCCGA
CGCCGACCAACTGGAAAGGCCTTTTCCCTATACACAGGCGACTTTTGCTC
CCCTAGAGCGCCGGCTGGATGTGGCCGTCTTCCGGGCTATGTTCGCTAGC
AGTACGAGGCAGGCGCGGCAATTTGTCATTCATGGAGCGGTCACTGTCAA
TGGAAAGAAGATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCGATGA
GATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCCAGGTCGAACCC
GAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAGTACGACCGGCG
CGCGGCTCGTGTTGCTGAGAAGGAGGCAGAGAAGGAGGCGGAGAAAAAGG
CCGAGGAAGCCGAGGAAGCCAAGGAAGAGAGTGAGGCCAAGGAGGAGGAT
AAGCAAGAGGTCCAGTCCCCGCGCCAGACCTTGCAGGCTATGCTGTCGCA
GGCCAAGAACATCATGGCCGACAGCAAGTCGGTGCTTCCCGCCAAGCGGA
AGCAGGAGCTGCGTGGATTCCAGAAGGCCGTCCGTCGCGTGCTGTCTCGC
TCTGATTCAAACGTCCTCGCTGACAACCTGGAGGCTCAGTTTTCCGAGCT
GACTCTGCTGCTCAAGGCCAAGAAGGCAGAGAAGACGAAGAAGTCGGGCA
ACAAGGAAAGACAGGATACCACATCTGCCAACTCCGAGAAGTCCACCGAC
ACCAAGGCTGCTACTGAGGTAGACAGCGAGACCCAGCCCGGCGATAAGCT
GTCCGAGGCATTCCGCCAGGCTGCTGAGAACCCTGAACAGGAGGTGGATA
CGTCCGAGTTGACCGATGAGGAGTTCAAGATTCTTCGTCGTGCCCTTATC
CAGATGCGTGATAACCCGATCGATCATTCGAAGCCGTACGCTACGCCCTG
GCGGCCGCGGGACTTCATGAGCGCCTTTGCCACGATCCCTCGCTACCTGG
AAGTGAACCCTAAGGCTTGTGCGGCCGTCTACCTGCGCCACCCCGTTGTT
CGTCCGGGCTTGTCGGAGGTTCCATCGCCCTTCAACCTTGCGACTGGAGC
GCTGGCATACCACTGGTACCTGAGACGGCGGTAGAAAGTCCGGCAATCAT
GGAGCAAATGGAACCTATATAACATGAAGCGGTTCTCCGTCAAGAACCCC
ATGTTCCGAACTCATTTCCAGCAAAAATGGGATGCCAAGTCGATAGCCCG
TGGATATCATGGCGAACAAGTCTCCGAGAAGCACTGGGTGCGCATGTTTT
CTCCCCGCATTCGTAGCGTGGTGCCCATGGATCCCGCCAAATTGGCCAAA
GACGATGGTTCTGCCTTGTCTGCCGGCCGTGGTATGGGTGTTGAGTTGCG
TTCTGACACAGCCGCGCATCTTAAACTCTCAAAATACGAGAAAGCCGACG
CCGACCAACTGGAAAGGCCTTTTCCCTATACACAGGCGACTTTTGCTCCC
CTAGAGCGCCGGCTGGATGTGGCCGTCTTCCGGGCTATGTTCGCTAGCAG
TACGAGGCAGGCGCGGCAATTTGTCATTCATGGAGCGGTCACTGTCAATG
GAAAGAAGATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0019843rRNA binding
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005537ATCC10864_005537Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005537-T1ATCC10864_005537-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005537-T1.cdsATCC10864_005537-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005537-T1.exon3ATCC10864_005537-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005537-T1.exon2ATCC10864_005537-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005537-T1.exon1ATCC10864_005537-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01479
InterProIPR005709
InterProIPR002942
InterProIPR022801
InterProIPR036986
InterProIPR018079
Properties
Property NameValue
NoteBUSCO:EOG092651FJ
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000155supercontigMCQH01000155:52867..54423 -
Powered by Drupal