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ATCC10864_005540-T1, ATCC10864_005540-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005540-T1
Unique NameATCC10864_005540-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000155:62494..63867-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005540-T1 ID=ATCC10864_005540-T1|Name=ATCC10864_005540-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1374bp|location=Sequence derived from alignment at MCQH01000155:62494..63867- (Aspergillus niger ATCC 10864)
ATGGCTCCCGACAAGAAGGAAGAAGCATCCTCCCCGGATGCTGCCATCCC
CGACCCGCCGCCCATCCACCCGTCCTTCATCCAGGTAGCCAAGCCGTACA
TCTTTGAGCAGACCATTCAGCAATGTATTGCCGCGATGGGTGTCAATCCA
CTGCGCGAAGAATCCCTTCGCTTGCAAGGCGTGACCTGGATCGATAATGT
CCGCCGTGTGCTCTACCTGTAGGTGCCCATGCGCCGGATTCTCCACTGCT
CCCAAAGCTCAAAATAGCTAACCAGGTAGTTAGCCCGATCCGCACCTTTA
ACACGGCTGTGGTGTACTACCACAAGTTCCGACTCGTTCATCCTGACAAC
GAGTATAATTATATGGTACTGCCCACTTTATGTCCCCTATTGTACCACTC
GACGTGTTTGTTAACTCTGATCCAGGACGCCGCTGCAGCTGCGCTCTTTA
CTGCCTGCAAGATCGAGGACACGTTGAAGCGGTCCCGGGAGATTGTTTGC
GCTGCGTATAATCTCAAGCTGCCGGCACAGGAGCACATGGCTCCTGATAA
TCCGGTAAGCTGTTGCTTCTGACCTCTCTCATGAGATGCATGCTAATAAA
GGCAGGTCTTTGAAGCACACGCCAGAGGCATCATCGGCCTGGAGAGACTA
ATGCTGGAGGCATCCGGCTTCGACTTCCGGACCCGCCATCCGCAAAAGAC
GCTCATCAAGCTCGCCCGGAAGTACGGGCTGACTCCGCAATCGGAGGTCT
CGAACCTGGCGTATCGCATCTCGCAGGACCTCTATCGTACGTACGCGCCT
ATCAAGCAAACGACGTCCACCATGGCCTTCACCTGTTTGGAACTGGCGGG
GCGGTTACTTGACCAGCGAATCGAGGCCGTGGAGCAAGGCGTTGACTATG
CAAACTGGAAGACGAGTCGTGAGGAAGTAATGGGTAAGGCCGAGCCAACT
TCCCTGCATTGAAGCTCAAAGCTAAATCGAAACGAAAGAAACTCTCTTCG
ACCTCCTAGAGCTCTACACCCACAACCGCGGACACACCACCGTCGGTCCC
CATTTCCCAGCGGATCGCTTCCTCACCGTCCGCATTCCACTAAACACCGA
AGCCGAGTCCCAGAAACTACCCCGGTACACGAACTGGGTTCCTGAACCTC
GCGAAAGCAAGGCCACGAACGGCGACAAAGCCACGAAGGATGCCACCACC
AAACTGCACCCTCTCACTCCTGTTGCCGCCAATGGAGACCGGCCCAGAGC
TACAGAAAAGGGCCGCGATGGCGCCGTGCGCTTTATGCTGGATCCGGAGT
GCGCTGATGCCGAGAAATCCCACGTAGCGACGTACTTCAAAGTGGAGATG
GAAGAGTACGAGGTTGAGGAGTGA
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Coding sequence (CDS) from alignment at MCQH01000155:62494..63867-

>ATCC10864_005540-T1 ID=ATCC10864_005540-T1|Name=ATCC10864_005540-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5715bp|location=Sequence derived from alignment at MCQH01000155:62494..63867- (Aspergillus niger ATCC 10864)
AAACTCTCTTCGACCTCCTAGAGCTCTACACCCACAACCGCGGACACACC
ACCGTCGGTCCCCATTTCCCAGCGGATCGCTTCCTCACCGTCCGCATTCC
ACTAAACACCGAAGCCGAGTCCCAGAAACTACCCCGGTACACGAACTGGG
TTCCTGAACCTCGCGAAAGCAAGGCCACGAACGGCGACAAAGCCACGAAG
GATGCCACCACCAAACTGCACCCTCTCACTCCTGTTGCCGCCAATGGAGA
CCGGCCCAGAGCTACAGAAAAGGGCCGCGATGGCGCCGTGCGCTTTATGC
TGGATCCGGAGTGCGCTGATGCCGAGAAATCCCACGTAGCGACGTACTTC
AAAGTGGAGATGGAAGAGTACGAGGTTGAGGAGTGAGTCTTTGAAGCACA
CGCCAGAGGCATCATCGGCCTGGAGAGACTAATGCTGGAGGCATCCGGCT
TCGACTTCCGGACCCGCCATCCGCAAAAGACGCTCATCAAGCTCGCCCGG
AAGTACGGGCTGACTCCGCAATCGGAGGTCTCGAACCTGGCGTATCGCAT
CTCGCAGGACCTCTATCGTACGTACGCGCCTATCAAGCAAACGACGTCCA
CCATGGCCTTCACCTGTTTGGAACTGGCGGGGCGGTTACTTGACCAGCGA
ATCGAGGCCGTGGAGCAAGGCGTTGACTATGCAAACTGGAAGACGAGTCG
TGAGGAAGTAATGGGACGCCGCTGCAGCTGCGCTCTTTACTGCCTGCAAG
ATCGAGGACACGTTGAAGCGGTCCCGGGAGATTGTTTGCGCTGCGTATAA
TCTCAAGCTGCCGGCACAGGAGCACATGGCTCCTGATAATCCGCCCGATC
CGCACCTTTAACACGGCTGTGGTGTACTACCACAAGTTCCGACTCGTTCA
TCCTGACAACGAGTATAATTATATGATGGCTCCCGACAAGAAGGAAGAAG
CATCCTCCCCGGATGCTGCCATCCCCGACCCGCCGCCCATCCACCCGTCC
TTCATCCAGGTAGCCAAGCCGTACATCTTTGAGCAGACCATTCAGCAATG
TATTGCCGCGATGGGTGTCAATCCACTGCGCGAAGAATCCCTTCGCTTGC
AAGGCGTGACCTGGATCGATAATGTCCGCCGTGTGCTCTACCTAAACTCT
CTTCGACCTCCTAGAGCTCTACACCCACAACCGCGGACACACCACCGTCG
GTCCCCATTTCCCAGCGGATCGCTTCCTCACCGTCCGCATTCCACTAAAC
ACCGAAGCCGAGTCCCAGAAACTACCCCGGTACACGAACTGGGTTCCTGA
ACCTCGCGAAAGCAAGGCCACGAACGGCGACAAAGCCACGAAGGATGCCA
CCACCAAACTGCACCCTCTCACTCCTGTTGCCGCCAATGGAGACCGGCCC
AGAGCTACAGAAAAGGGCCGCGATGGCGCCGTGCGCTTTATGCTGGATCC
GGAGTGCGCTGATGCCGAGAAATCCCACGTAGCGACGTACTTCAAAGTGG
AGATGGAAGAGTACGAGGTTGAGGAGTGAGTCTTTGAAGCACACGCCAGA
GGCATCATCGGCCTGGAGAGACTAATGCTGGAGGCATCCGGCTTCGACTT
CCGGACCCGCCATCCGCAAAAGACGCTCATCAAGCTCGCCCGGAAGTACG
GGCTGACTCCGCAATCGGAGGTCTCGAACCTGGCGTATCGCATCTCGCAG
GACCTCTATCGTACGTACGCGCCTATCAAGCAAACGACGTCCACCATGGC
CTTCACCTGTTTGGAACTGGCGGGGCGGTTACTTGACCAGCGAATCGAGG
CCGTGGAGCAAGGCGTTGACTATGCAAACTGGAAGACGAGTCGTGAGGAA
GTAATGGGACGCCGCTGCAGCTGCGCTCTTTACTGCCTGCAAGATCGAGG
ACACGTTGAAGCGGTCCCGGGAGATTGTTTGCGCTGCGTATAATCTCAAG
CTGCCGGCACAGGAGCACATGGCTCCTGATAATCCGCCCGATCCGCACCT
TTAACACGGCTGTGGTGTACTACCACAAGTTCCGACTCGTTCATCCTGAC
AACGAGTATAATTATATGATGGCTCCCGACAAGAAGGAAGAAGCATCCTC
CCCGGATGCTGCCATCCCCGACCCGCCGCCCATCCACCCGTCCTTCATCC
AGGTAGCCAAGCCGTACATCTTTGAGCAGACCATTCAGCAATGTATTGCC
GCGATGGGTGTCAATCCACTGCGCGAAGAATCCCTTCGCTTGCAAGGCGT
GACCTGGATCGATAATGTCCGCCGTGTGCTCTACCTAAACTCTCTTCGAC
CTCCTAGAGCTCTACACCCACAACCGCGGACACACCACCGTCGGTCCCCA
TTTCCCAGCGGATCGCTTCCTCACCGTCCGCATTCCACTAAACACCGAAG
CCGAGTCCCAGAAACTACCCCGGTACACGAACTGGGTTCCTGAACCTCGC
GAAAGCAAGGCCACGAACGGCGACAAAGCCACGAAGGATGCCACCACCAA
ACTGCACCCTCTCACTCCTGTTGCCGCCAATGGAGACCGGCCCAGAGCTA
CAGAAAAGGGCCGCGATGGCGCCGTGCGCTTTATGCTGGATCCGGAGTGC
GCTGATGCCGAGAAATCCCACGTAGCGACGTACTTCAAAGTGGAGATGGA
AGAGTACGAGGTTGAGGAGTGAGTCTTTGAAGCACACGCCAGAGGCATCA
TCGGCCTGGAGAGACTAATGCTGGAGGCATCCGGCTTCGACTTCCGGACC
CGCCATCCGCAAAAGACGCTCATCAAGCTCGCCCGGAAGTACGGGCTGAC
TCCGCAATCGGAGGTCTCGAACCTGGCGTATCGCATCTCGCAGGACCTCT
ATCGTACGTACGCGCCTATCAAGCAAACGACGTCCACCATGGCCTTCACC
TGTTTGGAACTGGCGGGGCGGTTACTTGACCAGCGAATCGAGGCCGTGGA
GCAAGGCGTTGACTATGCAAACTGGAAGACGAGTCGTGAGGAAGTAATGG
GACGCCGCTGCAGCTGCGCTCTTTACTGCCTGCAAGATCGAGGACACGTT
GAAGCGGTCCCGGGAGATTGTTTGCGCTGCGTATAATCTCAAGCTGCCGG
CACAGGAGCACATGGCTCCTGATAATCCGCCCGATCCGCACCTTTAACAC
GGCTGTGGTGTACTACCACAAGTTCCGACTCGTTCATCCTGACAACGAGT
ATAATTATATGATGGCTCCCGACAAGAAGGAAGAAGCATCCTCCCCGGAT
GCTGCCATCCCCGACCCGCCGCCCATCCACCCGTCCTTCATCCAGGTAGC
CAAGCCGTACATCTTTGAGCAGACCATTCAGCAATGTATTGCCGCGATGG
GTGTCAATCCACTGCGCGAAGAATCCCTTCGCTTGCAAGGCGTGACCTGG
ATCGATAATGTCCGCCGTGTGCTCTACCTAAACTCTCTTCGACCTCCTAG
AGCTCTACACCCACAACCGCGGACACACCACCGTCGGTCCCCATTTCCCA
GCGGATCGCTTCCTCACCGTCCGCATTCCACTAAACACCGAAGCCGAGTC
CCAGAAACTACCCCGGTACACGAACTGGGTTCCTGAACCTCGCGAAAGCA
AGGCCACGAACGGCGACAAAGCCACGAAGGATGCCACCACCAAACTGCAC
CCTCTCACTCCTGTTGCCGCCAATGGAGACCGGCCCAGAGCTACAGAAAA
GGGCCGCGATGGCGCCGTGCGCTTTATGCTGGATCCGGAGTGCGCTGATG
CCGAGAAATCCCACGTAGCGACGTACTTCAAAGTGGAGATGGAAGAGTAC
GAGGTTGAGGAGTGAGTCTTTGAAGCACACGCCAGAGGCATCATCGGCCT
GGAGAGACTAATGCTGGAGGCATCCGGCTTCGACTTCCGGACCCGCCATC
CGCAAAAGACGCTCATCAAGCTCGCCCGGAAGTACGGGCTGACTCCGCAA
TCGGAGGTCTCGAACCTGGCGTATCGCATCTCGCAGGACCTCTATCGTAC
GTACGCGCCTATCAAGCAAACGACGTCCACCATGGCCTTCACCTGTTTGG
AACTGGCGGGGCGGTTACTTGACCAGCGAATCGAGGCCGTGGAGCAAGGC
GTTGACTATGCAAACTGGAAGACGAGTCGTGAGGAAGTAATGGGACGCCG
CTGCAGCTGCGCTCTTTACTGCCTGCAAGATCGAGGACACGTTGAAGCGG
TCCCGGGAGATTGTTTGCGCTGCGTATAATCTCAAGCTGCCGGCACAGGA
GCACATGGCTCCTGATAATCCGCCCGATCCGCACCTTTAACACGGCTGTG
GTGTACTACCACAAGTTCCGACTCGTTCATCCTGACAACGAGTATAATTA
TATGATGGCTCCCGACAAGAAGGAAGAAGCATCCTCCCCGGATGCTGCCA
TCCCCGACCCGCCGCCCATCCACCCGTCCTTCATCCAGGTAGCCAAGCCG
TACATCTTTGAGCAGACCATTCAGCAATGTATTGCCGCGATGGGTGTCAA
TCCACTGCGCGAAGAATCCCTTCGCTTGCAAGGCGTGACCTGGATCGATA
ATGTCCGCCGTGTGCTCTACCTAAACTCTCTTCGACCTCCTAGAGCTCTA
CACCCACAACCGCGGACACACCACCGTCGGTCCCCATTTCCCAGCGGATC
GCTTCCTCACCGTCCGCATTCCACTAAACACCGAAGCCGAGTCCCAGAAA
CTACCCCGGTACACGAACTGGGTTCCTGAACCTCGCGAAAGCAAGGCCAC
GAACGGCGACAAAGCCACGAAGGATGCCACCACCAAACTGCACCCTCTCA
CTCCTGTTGCCGCCAATGGAGACCGGCCCAGAGCTACAGAAAAGGGCCGC
GATGGCGCCGTGCGCTTTATGCTGGATCCGGAGTGCGCTGATGCCGAGAA
ATCCCACGTAGCGACGTACTTCAAAGTGGAGATGGAAGAGTACGAGGTTG
AGGAGTGAGTCTTTGAAGCACACGCCAGAGGCATCATCGGCCTGGAGAGA
CTAATGCTGGAGGCATCCGGCTTCGACTTCCGGACCCGCCATCCGCAAAA
GACGCTCATCAAGCTCGCCCGGAAGTACGGGCTGACTCCGCAATCGGAGG
TCTCGAACCTGGCGTATCGCATCTCGCAGGACCTCTATCGTACGTACGCG
CCTATCAAGCAAACGACGTCCACCATGGCCTTCACCTGTTTGGAACTGGC
GGGGCGGTTACTTGACCAGCGAATCGAGGCCGTGGAGCAAGGCGTTGACT
ATGCAAACTGGAAGACGAGTCGTGAGGAAGTAATGGGACGCCGCTGCAGC
TGCGCTCTTTACTGCCTGCAAGATCGAGGACACGTTGAAGCGGTCCCGGG
AGATTGTTTGCGCTGCGTATAATCTCAAGCTGCCGGCACAGGAGCACATG
GCTCCTGATAATCCGCCCGATCCGCACCTTTAACACGGCTGTGGTGTACT
ACCACAAGTTCCGACTCGTTCATCCTGACAACGAGTATAATTATATGATG
GCTCCCGACAAGAAGGAAGAAGCATCCTCCCCGGATGCTGCCATCCCCGA
CCCGCCGCCCATCCACCCGTCCTTCATCCAGGTAGCCAAGCCGTACATCT
TTGAGCAGACCATTCAGCAATGTATTGCCGCGATGGGTGTCAATCCACTG
CGCGAAGAATCCCTTCGCTTGCAAGGCGTGACCTGGATCGATAATGTCCG
CCGTGTGCTCTACCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Molecular Function
TermDefinition
GO:0016538cyclin-dependent protein serine/threonine kinase regulator activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005540ATCC10864_005540Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005540-T1ATCC10864_005540-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005540-T1.cdsATCC10864_005540-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005540-T1.exon5ATCC10864_005540-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_005540-T1.exon4ATCC10864_005540-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_005540-T1.exon3ATCC10864_005540-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005540-T1.exon2ATCC10864_005540-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005540-T1.exon1ATCC10864_005540-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013763
PFAMPF00134
InterProIPR036915
InterProIPR043198
InterProIPR006671
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000155supercontigMCQH01000155:62494..63867 -
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