You are here

Home

ATCC10864_005567-T1, ATCC10864_005567-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005567-T1
Unique NameATCC10864_005567-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000155:135022..135489+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005567-T1 ID=ATCC10864_005567-T1|Name=ATCC10864_005567-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=468bp|location=Sequence derived from alignment at MCQH01000155:135022..135489+ (Aspergillus niger ATCC 10864)
ATGGCAGCTACACAGAAGCTATACCCCCGCGCGACCGTCAAACGCGTCGT
CAAGGCACACTCCAACCGCAACGTGAGCAAGAATGCCGATATTCTGGTAA
GCTGCAACCCTGATCCCCTTGATTGATACTATCATTGTCTGCTCAGAAAC
TGACATACTCGTCTTTACTGTATAGATCTTCCTGGATTACATGCTGTTCA
TGCAAGAGTGAGTCGACGTCATTGTTTACTGTTTATAATTACCTGGCATC
TTGAAGCTGGTTGCTGACGTCTGCTTGTATTTGCAGACTGATGCGGGAAT
CCTCAATTCAATCGCGCAAAGCGGGCGAGAAGAACATCTCTCCCAACAGC
GTTCGAAAGGTGACTGAGGTATGTTTGCTTTGTTGCATTTCAAGAATAGC
CTGTTATAATCTAGGCTGACCATGAGTTTCCACCGGTTTAGAGAACCCTT
CGGAAGTTTAAAGGATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000155:135022..135489+

>ATCC10864_005567-T1 ID=ATCC10864_005567-T1|Name=ATCC10864_005567-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=948bp|location=Sequence derived from alignment at MCQH01000155:135022..135489+ (Aspergillus niger ATCC 10864)
ATGGCAGCTACACAGAAGCTATACCCCCGCGCGACCGTCAAACGCGTCGT
CAAGGCACACTCCAACCGCAACGTGAGCAAGAATGCCGATATTCTGATCT
TCCTGGATTACATGCTGTTCATGCAAGAACTGATGCGGGAATCCTCAATT
CAATCGCGCAAAGCGGGCGAGAAGAACATCTCTCCCAACAGCGTTCGAAA
GGTGACTGAGAGAACCCTTCGGAAGTTTAAAGGATAAATGGCAGCTACAC
AGAAGCTATACCCCCGCGCGACCGTCAAACGCGTCGTCAAGGCACACTCC
AACCGCAACGTGAGCAAGAATGCCGATATTCTGATCTTCCTGGATTACAT
GCTGTTCATGCAAGAACTGATGCGGGAATCCTCAATTCAATCGCGCAAAG
CGGGCGAGAAGAACATCTCTCCCAACAGCGTTCGAAAGGTGACTGAGAGA
ACCCTTCGGAAGTTTAAAGGATAAATGGCAGCTACACAGAAGCTATACCC
CCGCGCGACCGTCAAACGCGTCGTCAAGGCACACTCCAACCGCAACGTGA
GCAAGAATGCCGATATTCTGATCTTCCTGGATTACATGCTGTTCATGCAA
GAACTGATGCGGGAATCCTCAATTCAATCGCGCAAAGCGGGCGAGAAGAA
CATCTCTCCCAACAGCGTTCGAAAGGTGACTGAGAGAACCCTTCGGAAGT
TTAAAGGATAAATGGCAGCTACACAGAAGCTATACCCCCGCGCGACCGTC
AAACGCGTCGTCAAGGCACACTCCAACCGCAACGTGAGCAAGAATGCCGA
TATTCTGATCTTCCTGGATTACATGCTGTTCATGCAAGAACTGATGCGGG
AATCCTCAATTCAATCGCGCAAAGCGGGCGAGAAGAACATCTCTCCCAAC
AGCGTTCGAAAGGTGACTGAGAGAACCCTTCGGAAGTTTAAAGGATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005567ATCC10864_005567Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005567-T1.exon1ATCC10864_005567-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005567-T1.exon2ATCC10864_005567-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005567-T1.exon3ATCC10864_005567-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005567-T1.exon4ATCC10864_005567-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005567-T1.cdsATCC10864_005567-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005567-T1ATCC10864_005567-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00808
InterProIPR009072
InterProIPR003958
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000155supercontigMCQH01000155:135022..135489 +
Powered by Drupal