You are here

Home

ATCC10864_005580-T1, ATCC10864_005580-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005580-T1
Unique NameATCC10864_005580-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000155:173214..173761-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005580-T1 ID=ATCC10864_005580-T1|Name=ATCC10864_005580-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=548bp|location=Sequence derived from alignment at MCQH01000155:173214..173761- (Aspergillus niger ATCC 10864)
ATGGGTGACAACAACCAAGCTACCACGGGTTTTGACCCTGCCGCCAATGC
TCCCGATGCTGCTGCTTGGGACAAGGGCAAGGGCAAGGCGACAGACCCCA
CTCAAGACATGCGCATGGACGATGATGAGAGTGATGAGAGCGAGGCCGAA
GAAATGGTGAGTCTCATACTACCCACTAGCTAGATCTTCATATAAAAAAA
GAGACATGTTAAGCTAACTGGCCTGCTTTTTGTTCCCTTAGATCGATGAT
GGTATGATGCCCTGATTTCCTTCGTCCGTCAATTGGACACGGGTCTTGTC
CTCCCTAGCTCGAACCCCATACTAACTGCGCATCTTGACTGCCAGATGAC
GATGAAGACAATGACACCCTGGAACCCATCTCTTCTGATAACATCATCTC
TGGTGGCCGCCGTACACGCGGCAAGACCATTGACTTCCAAGCCGCCGCCG
AGAGTTTGAAGGATGATGGCATGGACGAGGACGACGATGAGGACGACGAC
TACGTCGGCGCTGGTGATGACGATGAGGACAACAAGATGCAGGATTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000155:173214..173761-

>ATCC10864_005580-T1 ID=ATCC10864_005580-T1|Name=ATCC10864_005580-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1107bp|location=Sequence derived from alignment at MCQH01000155:173214..173761- (Aspergillus niger ATCC 10864)
ATGACGATGAAGACAATGACACCCTGGAACCCATCTCTTCTGATAACATC
ATCTCTGGTGGCCGCCGTACACGCGGCAAGACCATTGACTTCCAAGCCGC
CGCCGAGAGTTTGAAGGATGATGGCATGGACGAGGACGACGATGAGGACG
ACGACTACGTCGGCGCTGGTGATGACGATGAGGACAACAAGATGCAGGAT
TAGATCGATGATGATGGGTGACAACAACCAAGCTACCACGGGTTTTGACC
CTGCCGCCAATGCTCCCGATGCTGCTGCTTGGGACAAGGGCAAGGGCAAG
GCGACAGACCCCACTCAAGACATGCGCATGGACGATGATGAGAGTGATGA
GAGCGAGGCCGAAGAAATGATGACGATGAAGACAATGACACCCTGGAACC
CATCTCTTCTGATAACATCATCTCTGGTGGCCGCCGTACACGCGGCAAGA
CCATTGACTTCCAAGCCGCCGCCGAGAGTTTGAAGGATGATGGCATGGAC
GAGGACGACGATGAGGACGACGACTACGTCGGCGCTGGTGATGACGATGA
GGACAACAAGATGCAGGATTAGATCGATGATGATGGGTGACAACAACCAA
GCTACCACGGGTTTTGACCCTGCCGCCAATGCTCCCGATGCTGCTGCTTG
GGACAAGGGCAAGGGCAAGGCGACAGACCCCACTCAAGACATGCGCATGG
ACGATGATGAGAGTGATGAGAGCGAGGCCGAAGAAATGATGACGATGAAG
ACAATGACACCCTGGAACCCATCTCTTCTGATAACATCATCTCTGGTGGC
CGCCGTACACGCGGCAAGACCATTGACTTCCAAGCCGCCGCCGAGAGTTT
GAAGGATGATGGCATGGACGAGGACGACGATGAGGACGACGACTACGTCG
GCGCTGGTGATGACGATGAGGACAACAAGATGCAGGATTAGATCGATGAT
GATGGGTGACAACAACCAAGCTACCACGGGTTTTGACCCTGCCGCCAATG
CTCCCGATGCTGCTGCTTGGGACAAGGGCAAGGGCAAGGCGACAGACCCC
ACTCAAGACATGCGCATGGACGATGATGAGAGTGATGAGAGCGAGGCCGA
AGAAATG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CHZ1ATCC10864_005580Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005580-T1ATCC10864_005580-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005580-T1.cdsATCC10864_005580-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005580-T1.exon3ATCC10864_005580-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005580-T1.exon2ATCC10864_005580-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005580-T1.exon1ATCC10864_005580-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR019098
PFAMPF09649
Properties
Property NameValue
ProductHistone H2A.Z-specific chaperone
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000155supercontigMCQH01000155:173214..173761 -
Powered by Drupal