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ATCC10864_005584-T1, ATCC10864_005584-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005584-T1
Unique NameATCC10864_005584-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000155:181508..182058-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005584-T1 ID=ATCC10864_005584-T1|Name=ATCC10864_005584-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=551bp|location=Sequence derived from alignment at MCQH01000155:181508..182058- (Aspergillus niger ATCC 10864)
ATGCGTTCCAAGTTTAAGGACGAGCACCCCTTCGAGAAGCGCAAGGCAGA
GGCCGAGCGTATCCGTCAGAAATATGCCGATCGCATTCCAGTACGTCTAT
CCTTTGTTTTATTTTCTACTGTGATCTTGATTTCACGGTCTTTTGGGGGA
AGGAACGGGTCTCTAGCTCACCGCTTGTTCGAGTCGCTAACCCGGCTCCT
ATCCTACAGGTAATCTGCGAAAAGGTCGAGAAATCGGACATCGCTACCAT
CGACAAGAAGAAATATCTTGTCCCTGCCGACCTTACCGTTGGGCAGTTCG
TCTACGTGATCCGTAAGCGGATTAAGCTGTCCCCCGAGAAGGCGATCTTT
ATCTTTGTCGACGAGGTTTTGCCGCCTACGGCCGCTCTCATGAGCAGTAT
CTACGAAGAGCACAAGGATGAAGATGGCTTCTTGTATATCACGTATGCCG
ATCCCTCTGATTTCCTACTACCACTGTTCTGTGTGCATAGTGCTAACTCG
GATCTTCTCTTTATCAGGTACTCCGGCGAGAATACGTTTGGTGACTGCTA
G
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Coding sequence (CDS) from alignment at MCQH01000155:181508..182058-

>ATCC10864_005584-T1 ID=ATCC10864_005584-T1|Name=ATCC10864_005584-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1071bp|location=Sequence derived from alignment at MCQH01000155:181508..182058- (Aspergillus niger ATCC 10864)
GTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGTAATCTGCGAAAAGG
TCGAGAAATCGGACATCGCTACCATCGACAAGAAGAAATATCTTGTCCCT
GCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATCCGTAAGCGGATTAA
GCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGACGAGGTTTTGCCGC
CTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGCACAAGGATGAAGAT
GGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGGACGAGCACCCCTTC
GAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAGAAATATGCCGATCG
CATTCCAGTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGTAATCTGC
GAAAAGGTCGAGAAATCGGACATCGCTACCATCGACAAGAAGAAATATCT
TGTCCCTGCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATCCGTAAGC
GGATTAAGCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGACGAGGTT
TTGCCGCCTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGCACAAGGA
TGAAGATGGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGGACGAGCA
CCCCTTCGAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAGAAATATG
CCGATCGCATTCCAGTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGT
AATCTGCGAAAAGGTCGAGAAATCGGACATCGCTACCATCGACAAGAAGA
AATATCTTGTCCCTGCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATC
CGTAAGCGGATTAAGCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGA
CGAGGTTTTGCCGCCTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGC
ACAAGGATGAAGATGGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGG
ACGAGCACCCCTTCGAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAG
AAATATGCCGATCGCATTCCA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG8ATCC10864_005584Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005584-T1ATCC10864_005584-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005584-T1.cdsATCC10864_005584-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005584-T1.exon3ATCC10864_005584-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005584-T1.exon2ATCC10864_005584-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005584-T1.exon1ATCC10864_005584-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF04110
PFAMPF02991
InterProIPR004241
InterProIPR029071
Properties
Property NameValue
NoteBUSCO:EOG09265BTA
Productubiquitin-like protein atg8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000155supercontigMCQH01000155:181508..182058 -
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