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ATCC10864_005596-T1, ATCC10864_005596-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005596-T1
Unique NameATCC10864_005596-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000155:214670..215697+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005596-T1 ID=ATCC10864_005596-T1|Name=ATCC10864_005596-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1028bp|location=Sequence derived from alignment at MCQH01000155:214670..215697+ (Aspergillus niger ATCC 10864)
ATGTCGCCAACTTCTACAGGTACTGCCTCCGCTGCAGAGGCTAAGAATGG
CACCTCCACACCCTTTGTCAACACCATGCCCGACTCGACCTTCAGCTGGC
AGGTCACACTCGCGCAAAAGGTGATCGCTATCACAGGCGCCAACCGCGGC
ATTGGATTGGGCATTGCGGAAGTGTGTCTCGCCAATTCCGCAAAGTTCGT
ATATTCAATGGATCTCATGGAGCCTGGAGAGGAGACCATTGCCCTTCAGA
CCCGCTACCCGAACTTCCGATATATCCAGACCGACGTGACATCCGAGGAG
AGTATCGAGAAGGCAGTGAATCAAATTGTGGAAGAAACCGGGCGAATTGA
TGGGCTGGTGGCTAATGCGGGCATGACCAAACACCAACCGGCGCTCAAGT
TCGAGCGCCCGGAATTGGAGCGCATGTTCAACCTCAATGTGAGTGGACCT
TTTGTTTGGTCGCGCCATGCATGCAGCACGCGGGTACTTACGGGCGCAGG
TTTTCGGTGCATATTTCTGCGCCCAGATTGTCGCTCGCAAGTTCATGGAG
CTTGGTATTAAGGGGTCCATCGTTATGACTGCTAGTATGACTTCTTATCG
TCCGAATCGGGTAAGTACTTTTCCCCATAGGGGTGTGAGAGTTGTGCTGA
TTGATTCCCAGGCTGCCCCGTCTGCACCCTATGGCGCTACTAAAGCCGCA
GGTAAGTAATCTTATTCTCTTTGATAGCTTCCACACTATACTAACTGCAT
CCCCGTTAGTGCGCAACATGTGTCACACCTTGGCGATGGAGTGGAGCAAG
CACGGCATCCGCGTGAACAGCATCTCCCCTGGTTTTGTCCGCACCGCGAT
GACCTACTACGTGGAAACCGCCCCGGACTGGGATACAAAGATGGAATACT
ACGGAGGAATGCCTCGTCTGGCCGACCCTCGAGAGCTGGGAGGTGCTTAC
GTGTATCTGCTCAGCGATAGCAGCTCCTACACCACTGGCATTGACATTCC
CATTGCAGGCATCGTCGGTGCTTGGTAG
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Coding sequence (CDS) from alignment at MCQH01000155:214670..215697+

>ATCC10864_005596-T1 ID=ATCC10864_005596-T1|Name=ATCC10864_005596-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3432bp|location=Sequence derived from alignment at MCQH01000155:214670..215697+ (Aspergillus niger ATCC 10864)
ATGTCGCCAACTTCTACAGGTACTGCCTCCGCTGCAGAGGCTAAGAATGG
CACCTCCACACCCTTTGTCAACACCATGCCCGACTCGACCTTCAGCTGGC
AGGTCACACTCGCGCAAAAGGTGATCGCTATCACAGGCGCCAACCGCGGC
ATTGGATTGGGCATTGCGGAAGTGTGTCTCGCCAATTCCGCAAAGTTCGT
ATATTCAATGGATCTCATGGAGCCTGGAGAGGAGACCATTGCCCTTCAGA
CCCGCTACCCGAACTTCCGATATATCCAGACCGACGTGACATCCGAGGAG
AGTATCGAGAAGGCAGTGAATCAAATTGTGGAAGAAACCGGGCGAATTGA
TGGGCTGGTGGCTAATGCGGGCATGACCAAACACCAACCGGCGCTCAAGT
TCGAGCGCCCGGAATTGGAGCGCATGTTCAACCTCAATGTTTTCGGTGCA
TATTTCTGCGCCCAGATTGTCGCTCGCAAGTTCATGGAGCTTGGTATTAA
GGGGTCCATCGTTATGACTGCTAGTATGACTTCTTATCGTCCGAATCGGG
CTGCCCCGTCTGCACCCTATGGCGCTACTAAAGCCGCAGTGCGCAACATG
TGTCACACCTTGGCGATGGAGTGGAGCAAGCACGGCATCCGCGTGAACAG
CATCTCCCCTGGTTTTGTCCGCACCGCGATGACCTACTACGTGGAAACCG
CCCCGGACTGGGATACAAAGATGGAATACTACGGAGGAATGCCTCGTCTG
GCCGACCCTCGAGAGCTGGGAGGTGCTTACGTGTATCTGCTCAGCGATAG
CAGCTCCTACACCACTGGCATTGACATTCCCATTGCAGGCATCGTCGGTG
CTTGGTAGATGTCGCCAACTTCTACAGGTACTGCCTCCGCTGCAGAGGCT
AAGAATGGCACCTCCACACCCTTTGTCAACACCATGCCCGACTCGACCTT
CAGCTGGCAGGTCACACTCGCGCAAAAGGTGATCGCTATCACAGGCGCCA
ACCGCGGCATTGGATTGGGCATTGCGGAAGTGTGTCTCGCCAATTCCGCA
AAGTTCGTATATTCAATGGATCTCATGGAGCCTGGAGAGGAGACCATTGC
CCTTCAGACCCGCTACCCGAACTTCCGATATATCCAGACCGACGTGACAT
CCGAGGAGAGTATCGAGAAGGCAGTGAATCAAATTGTGGAAGAAACCGGG
CGAATTGATGGGCTGGTGGCTAATGCGGGCATGACCAAACACCAACCGGC
GCTCAAGTTCGAGCGCCCGGAATTGGAGCGCATGTTCAACCTCAATGTTT
TCGGTGCATATTTCTGCGCCCAGATTGTCGCTCGCAAGTTCATGGAGCTT
GGTATTAAGGGGTCCATCGTTATGACTGCTAGTATGACTTCTTATCGTCC
GAATCGGGCTGCCCCGTCTGCACCCTATGGCGCTACTAAAGCCGCAGTGC
GCAACATGTGTCACACCTTGGCGATGGAGTGGAGCAAGCACGGCATCCGC
GTGAACAGCATCTCCCCTGGTTTTGTCCGCACCGCGATGACCTACTACGT
GGAAACCGCCCCGGACTGGGATACAAAGATGGAATACTACGGAGGAATGC
CTCGTCTGGCCGACCCTCGAGAGCTGGGAGGTGCTTACGTGTATCTGCTC
AGCGATAGCAGCTCCTACACCACTGGCATTGACATTCCCATTGCAGGCAT
CGTCGGTGCTTGGTAGATGTCGCCAACTTCTACAGGTACTGCCTCCGCTG
CAGAGGCTAAGAATGGCACCTCCACACCCTTTGTCAACACCATGCCCGAC
TCGACCTTCAGCTGGCAGGTCACACTCGCGCAAAAGGTGATCGCTATCAC
AGGCGCCAACCGCGGCATTGGATTGGGCATTGCGGAAGTGTGTCTCGCCA
ATTCCGCAAAGTTCGTATATTCAATGGATCTCATGGAGCCTGGAGAGGAG
ACCATTGCCCTTCAGACCCGCTACCCGAACTTCCGATATATCCAGACCGA
CGTGACATCCGAGGAGAGTATCGAGAAGGCAGTGAATCAAATTGTGGAAG
AAACCGGGCGAATTGATGGGCTGGTGGCTAATGCGGGCATGACCAAACAC
CAACCGGCGCTCAAGTTCGAGCGCCCGGAATTGGAGCGCATGTTCAACCT
CAATGTTTTCGGTGCATATTTCTGCGCCCAGATTGTCGCTCGCAAGTTCA
TGGAGCTTGGTATTAAGGGGTCCATCGTTATGACTGCTAGTATGACTTCT
TATCGTCCGAATCGGGCTGCCCCGTCTGCACCCTATGGCGCTACTAAAGC
CGCAGTGCGCAACATGTGTCACACCTTGGCGATGGAGTGGAGCAAGCACG
GCATCCGCGTGAACAGCATCTCCCCTGGTTTTGTCCGCACCGCGATGACC
TACTACGTGGAAACCGCCCCGGACTGGGATACAAAGATGGAATACTACGG
AGGAATGCCTCGTCTGGCCGACCCTCGAGAGCTGGGAGGTGCTTACGTGT
ATCTGCTCAGCGATAGCAGCTCCTACACCACTGGCATTGACATTCCCATT
GCAGGCATCGTCGGTGCTTGGTAGATGTCGCCAACTTCTACAGGTACTGC
CTCCGCTGCAGAGGCTAAGAATGGCACCTCCACACCCTTTGTCAACACCA
TGCCCGACTCGACCTTCAGCTGGCAGGTCACACTCGCGCAAAAGGTGATC
GCTATCACAGGCGCCAACCGCGGCATTGGATTGGGCATTGCGGAAGTGTG
TCTCGCCAATTCCGCAAAGTTCGTATATTCAATGGATCTCATGGAGCCTG
GAGAGGAGACCATTGCCCTTCAGACCCGCTACCCGAACTTCCGATATATC
CAGACCGACGTGACATCCGAGGAGAGTATCGAGAAGGCAGTGAATCAAAT
TGTGGAAGAAACCGGGCGAATTGATGGGCTGGTGGCTAATGCGGGCATGA
CCAAACACCAACCGGCGCTCAAGTTCGAGCGCCCGGAATTGGAGCGCATG
TTCAACCTCAATGTTTTCGGTGCATATTTCTGCGCCCAGATTGTCGCTCG
CAAGTTCATGGAGCTTGGTATTAAGGGGTCCATCGTTATGACTGCTAGTA
TGACTTCTTATCGTCCGAATCGGGCTGCCCCGTCTGCACCCTATGGCGCT
ACTAAAGCCGCAGTGCGCAACATGTGTCACACCTTGGCGATGGAGTGGAG
CAAGCACGGCATCCGCGTGAACAGCATCTCCCCTGGTTTTGTCCGCACCG
CGATGACCTACTACGTGGAAACCGCCCCGGACTGGGATACAAAGATGGAA
TACTACGGAGGAATGCCTCGTCTGGCCGACCCTCGAGAGCTGGGAGGTGC
TTACGTGTATCTGCTCAGCGATAGCAGCTCCTACACCACTGGCATTGACA
TTCCCATTGCAGGCATCGTCGGTGCTTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005596ATCC10864_005596Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005596-T1.exon1ATCC10864_005596-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005596-T1.exon2ATCC10864_005596-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005596-T1.exon3ATCC10864_005596-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005596-T1.exon4ATCC10864_005596-T1.exon4Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005596-T1.cdsATCC10864_005596-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005596-T1ATCC10864_005596-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF08659
InterProIPR002347
PFAMPF00106
InterProIPR036291
PFAMPF13561
Properties
Property NameValue
NoteantiSMASH:Cluster_1000155.1
NoteSMCOG1001:short-chain dehydrogenase/reductase SDR
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000155supercontigMCQH01000155:214670..215697 +
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