You are here

Home

ATCC10864_005678-T1, ATCC10864_005678-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005678-T1
Unique NameATCC10864_005678-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000155:448789..451161-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005678-T1 ID=ATCC10864_005678-T1|Name=ATCC10864_005678-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2373bp|location=Sequence derived from alignment at MCQH01000155:448789..451161- (Aspergillus niger ATCC 10864)
ATGGCTTCGACCGACTGGACTCGTGCAGCCCCCTGGATCTGGCTGCCTAA
ATATCTCGAGGAAGATAATTGCCCTGGCCGATACTTCCTCTTCAGAAAGG
CCTTTCAATGGCATCACTCAGATGACCTACCAAATCTCTTTGTGCACGTC
TCCGCCGACAGTCGCTATCGCCTCTTCGTCAACGGTCACCGCGCGAGCTG
GGGTCCCTGCAAGTCTTATCCGGGAAAATGGTACTACGAGACAGTGGACA
TCCGTCCATATCTCCGCGACGGTGACAATGTAATCAGTGCTCGGGTCCTG
CGATATTCCACACTCGTGCCGGGCTCATCGTCTATCGTGAGCATGCCGCT
GCCCGGGTTCATGCTGTACTCCCCGCATCCCGAGCTCGCCATTTCCACTG
ATTCCTCGTGGACGTGCATCGAGCAGCGCTCCGTCAAGATTATCCCGCAG
TCCGAGTGGAACTACCTCCTGGGACCGCCCTTCCTATCCAACAATGAACG
CATCGAGGAGGACCAAACCATAACCGGCTGGCAAATGCCTGGATATGATG
ACGCGGCGTGGGACAAGGCCGTATTCCAGTACAATGCTGTGAAAATGCTT
CCTATGGTGAGCCCGTGGAAGCTGTGTCCGCGTCCAATACCAGATTTACC
CGAAGTTCCAGGGGAGTTCGACGGTGTGGTCAAAGCCACTGGTTCCGTCA
GCGAGGACGAGTGGAATGCACTGATTCGGGAGGACCAGCACGTGGTGATT
CCAGCGGATGCGCGGGTGACAGTGGACCTCAGCGTAGGCGCACTGATGAC
GGCGTTTGTCAACTTCGCTTTCAGAGGAGGAGCAGGCACGAAAGTCAGCG
TGTTGTACTCAGAATGTTATGAGAAGGATCTGGGAGTGGAAACGGCGCCA
TTCCCCATGCCTAGAACCAAGGGCAATCGCTCTGATACGACTGGTCGCCT
GTACGGGGTGAAAGATTTCTATAATGTCACCTCCGGACAGGACACCCACT
CGTTCGAGCCATTCTGGTTCCGGTGTTTCCGCTACGTGCAACTCGAAATA
ACCACCGCTTCCAATCCAATCACATTGACGAGCATATCCCTGCGAGAGAC
ATCCTACCCACTAGAGATTACCACCAAGGTGGACGCAGGTGCCGAGCTCA
ACAACATTTGGGAGATCAGTCTGCGAACACTCCAGAATTGCCGCCACGAG
ACGTACGAAGATTGCCCGTTCTACGAGCAGAATCAATTCGCATCAGATTC
ACGACTGCAGCTGCTTTTCAGCTACCAGTTATCCCCTGATGACCGTCTCG
CCCGCAAGACTCTCGAGGAATTCCACGCTAGCCGGACCCCAGACGGGCTC
ATAGTGGCACAGTATCCGGCGGGATTCGCTTCTAAGCAGATCCCGCAGTT
CTCGCTATTCTGGATCCTGATGGTACACGATCACATGATGTACTTTGCGG
ATCGAGCACTAGTGCGCAGATACCTGAGCACAGTCGATAGCATCATTCAG
CATTTCGAGGATCGCCTCAACGAGAGTGGACTAGTGGGGCAATTCGACCC
GGATACGTGGCCGTTCGTGGACTGGGTCCAGGATTGGTTCGTTCCAGGCC
AGATCTTTAAGTCATGTATGCCTCCGGCGTATCATACTGCGGGCGCAGCC
ACCGTCAACAGTTTGATGTATGCGTATGCCCTGCTGCATGCGGCTGAGCT
GTGTGAATTTGTGGGGAGAATGAGTACGGCGGAGGAGTACCGGGCGCGGG
TGCGCAGTATCCAGAAAGCCGTAAAGGAACTCTGCAAGTCTAACTCCCAG
CTGTATCTGGATGGCCCCGGAGTGGAACAGTACAGCCAACACACACAAGT
ATTCGCCATCCTCAGCGAGACGGTAACAGGAGACGCGGCAAAGCAGCTCC
TCAGACAGACCGTGACCGACTCTTCACTCGCGCAATGCTCTTATGCAATG
AAGTTTTACGTCTTCCGAGCAGCAGAAAAGGCGGGTATATACAGCGAGCT
ATTTCCCAGCATGCTGGATCCATGGCGGGCCATGATGGCCAATAACCTGA
CAACATGGGCAGAGGATGAGGTGAACGCCCGCAGCGACTGCCATGGGTGG
AGCGCCAGTCCGGTGAACGAGATCGTCACGCAGCTGTTCGGGGTGAAACC
CGCCGAGCCAGGCTTTGGGCGGGTCCGCATCGAGCCTCGGAGGGAATTAG
TGGCTCAGGCTGAGGGCTCGTTGTATACCACTCGGGGGAATATCAAGGTG
CAGTGGGGCCCGGGGAAGCCGCTAACTGTCGAGGCGACGAGTAAGGTTCT
TGTGGAGATTGTGGTTGATGGTCAGGTGGTTAAGAAGGTGCTGGGTCCTG
GGGAACCAGTAATAATTTCTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000155:448789..451161-

>ATCC10864_005678-T1 ID=ATCC10864_005678-T1|Name=ATCC10864_005678-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2373bp|location=Sequence derived from alignment at MCQH01000155:448789..451161- (Aspergillus niger ATCC 10864)
ATGGCTTCGACCGACTGGACTCGTGCAGCCCCCTGGATCTGGCTGCCTAA
ATATCTCGAGGAAGATAATTGCCCTGGCCGATACTTCCTCTTCAGAAAGG
CCTTTCAATGGCATCACTCAGATGACCTACCAAATCTCTTTGTGCACGTC
TCCGCCGACAGTCGCTATCGCCTCTTCGTCAACGGTCACCGCGCGAGCTG
GGGTCCCTGCAAGTCTTATCCGGGAAAATGGTACTACGAGACAGTGGACA
TCCGTCCATATCTCCGCGACGGTGACAATGTAATCAGTGCTCGGGTCCTG
CGATATTCCACACTCGTGCCGGGCTCATCGTCTATCGTGAGCATGCCGCT
GCCCGGGTTCATGCTGTACTCCCCGCATCCCGAGCTCGCCATTTCCACTG
ATTCCTCGTGGACGTGCATCGAGCAGCGCTCCGTCAAGATTATCCCGCAG
TCCGAGTGGAACTACCTCCTGGGACCGCCCTTCCTATCCAACAATGAACG
CATCGAGGAGGACCAAACCATAACCGGCTGGCAAATGCCTGGATATGATG
ACGCGGCGTGGGACAAGGCCGTATTCCAGTACAATGCTGTGAAAATGCTT
CCTATGGTGAGCCCGTGGAAGCTGTGTCCGCGTCCAATACCAGATTTACC
CGAAGTTCCAGGGGAGTTCGACGGTGTGGTCAAAGCCACTGGTTCCGTCA
GCGAGGACGAGTGGAATGCACTGATTCGGGAGGACCAGCACGTGGTGATT
CCAGCGGATGCGCGGGTGACAGTGGACCTCAGCGTAGGCGCACTGATGAC
GGCGTTTGTCAACTTCGCTTTCAGAGGAGGAGCAGGCACGAAAGTCAGCG
TGTTGTACTCAGAATGTTATGAGAAGGATCTGGGAGTGGAAACGGCGCCA
TTCCCCATGCCTAGAACCAAGGGCAATCGCTCTGATACGACTGGTCGCCT
GTACGGGGTGAAAGATTTCTATAATGTCACCTCCGGACAGGACACCCACT
CGTTCGAGCCATTCTGGTTCCGGTGTTTCCGCTACGTGCAACTCGAAATA
ACCACCGCTTCCAATCCAATCACATTGACGAGCATATCCCTGCGAGAGAC
ATCCTACCCACTAGAGATTACCACCAAGGTGGACGCAGGTGCCGAGCTCA
ACAACATTTGGGAGATCAGTCTGCGAACACTCCAGAATTGCCGCCACGAG
ACGTACGAAGATTGCCCGTTCTACGAGCAGAATCAATTCGCATCAGATTC
ACGACTGCAGCTGCTTTTCAGCTACCAGTTATCCCCTGATGACCGTCTCG
CCCGCAAGACTCTCGAGGAATTCCACGCTAGCCGGACCCCAGACGGGCTC
ATAGTGGCACAGTATCCGGCGGGATTCGCTTCTAAGCAGATCCCGCAGTT
CTCGCTATTCTGGATCCTGATGGTACACGATCACATGATGTACTTTGCGG
ATCGAGCACTAGTGCGCAGATACCTGAGCACAGTCGATAGCATCATTCAG
CATTTCGAGGATCGCCTCAACGAGAGTGGACTAGTGGGGCAATTCGACCC
GGATACGTGGCCGTTCGTGGACTGGGTCCAGGATTGGTTCGTTCCAGGCC
AGATCTTTAAGTCATGTATGCCTCCGGCGTATCATACTGCGGGCGCAGCC
ACCGTCAACAGTTTGATGTATGCGTATGCCCTGCTGCATGCGGCTGAGCT
GTGTGAATTTGTGGGGAGAATGAGTACGGCGGAGGAGTACCGGGCGCGGG
TGCGCAGTATCCAGAAAGCCGTAAAGGAACTCTGCAAGTCTAACTCCCAG
CTGTATCTGGATGGCCCCGGAGTGGAACAGTACAGCCAACACACACAAGT
ATTCGCCATCCTCAGCGAGACGGTAACAGGAGACGCGGCAAAGCAGCTCC
TCAGACAGACCGTGACCGACTCTTCACTCGCGCAATGCTCTTATGCAATG
AAGTTTTACGTCTTCCGAGCAGCAGAAAAGGCGGGTATATACAGCGAGCT
ATTTCCCAGCATGCTGGATCCATGGCGGGCCATGATGGCCAATAACCTGA
CAACATGGGCAGAGGATGAGGTGAACGCCCGCAGCGACTGCCATGGGTGG
AGCGCCAGTCCGGTGAACGAGATCGTCACGCAGCTGTTCGGGGTGAAACC
CGCCGAGCCAGGCTTTGGGCGGGTCCGCATCGAGCCTCGGAGGGAATTAG
TGGCTCAGGCTGAGGGCTCGTTGTATACCACTCGGGGGAATATCAAGGTG
CAGTGGGGCCCGGGGAAGCCGCTAACTGTCGAGGCGACGAGTAAGGTTCT
TGTGGAGATTGTGGTTGATGGTCAGGTGGTTAAGAAGGTGCTGGGTCCTG
GGGAACCAGTAATAATTTCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005678ATCC10864_005678Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005678-T1.cdsATCC10864_005678-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005678-T1.exon1ATCC10864_005678-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005678-T1ATCC10864_005678-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR012341
InterProIPR008979
InterProIPR008928
InterProIPR035396
PFAMPF17389
Properties
Property NameValue
NoteCAZy:GH78
NoteCAZy:CBM67
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000155supercontigMCQH01000155:448789..451161 -
Powered by Drupal