You are here

Home

ATCC10864_005725-T1, ATCC10864_005725-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005725-T1
Unique NameATCC10864_005725-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000156:56381..57088-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005725-T1 ID=ATCC10864_005725-T1|Name=ATCC10864_005725-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=708bp|location=Sequence derived from alignment at MCQH01000156:56381..57088- (Aspergillus niger ATCC 10864)
ATGGCAACCAGAGTTCTTCCAGCGCGCGGTGGTGGTCAAGGTAAACCCGC
TTCTGCTACCGGACTCCCTAACCAAACGTTAGTCTTGAATACTGCTTCCC
AATTCAAAGTGGGCATCATGGCTGACCCCAATTGCAGTTTGTATTGTACC
AACCTCCCAGACAAGCTGCGCAAGCATGACCTACGGCTATCCCTCTATAT
GCTTTTTTCAACCTACGGCACCGTTCTTGATGTTGTTGCCATGAAGACCC
AAAAGATGCGTGGTCAGGCCCATATTGTTTTTAAGGATGTTCAAGCTAGC
ACACAGGCTATGCGGGCTCTTCAGGGGTTTGAGTTTTTCGGCAAACAAAT
GGTATGTTTTTGCATAGTGCAGTGCGGTTGTTCCTCGCTCATTGACTCGG
GAATATAGAAAATCGTGTATGCTAAGGGTCCCTCGGACGTCATTGCCCGG
CTGCGCGGAACGTATAATGTGCCCACTACAACATCTGCCAGTCAAGCCAC
GGGAGCATCCACAGAGCTCCAAAAATCGATATTTAGCGGGCCCCCAGGAT
CGGCGGCTTTGCCGTCGAAGCCCAGCGGAGAAGTTAATGGAGAACCCCAA
GCAGGCCAAGGTGTCAAGCGGCCTCGTGAAGATGAAAGCGACGAAGAGGA
AGCCCCTATGGACGAGGACAGTGATGTGCCAATGGAAGCTTCATCGGATG
AAGATTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000156:56381..57088-

>ATCC10864_005725-T1 ID=ATCC10864_005725-T1|Name=ATCC10864_005725-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1773bp|location=Sequence derived from alignment at MCQH01000156:56381..57088- (Aspergillus niger ATCC 10864)
AAAATCGTGTATGCTAAGGGTCCCTCGGACGTCATTGCCCGGCTGCGCGG
AACGTATAATGTGCCCACTACAACATCTGCCAGTCAAGCCACGGGAGCAT
CCACAGAGCTCCAAAAATCGATATTTAGCGGGCCCCCAGGATCGGCGGCT
TTGCCGTCGAAGCCCAGCGGAGAAGTTAATGGAGAACCCCAAGCAGGCCA
AGGTGTCAAGCGGCCTCGTGAAGATGAAAGCGACGAAGAGGAAGCCCCTA
TGGACGAGGACAGTGATGTGCCAATGGAAGCTTCATCGGATGAAGATTAA
TTTGTATTGTACCAACCTCCCAGACAAGCTGCGCAAGCATGACCTACGGC
TATCCCTCTATATGCTTTTTTCAACCTACGGCACCGTTCTTGATGTTGTT
GCCATGAAGACCCAAAAGATGCGTGGTCAGGCCCATATTGTTTTTAAGGA
TGTTCAAGCTAGCACACAGGCTATGCGGGCTCTTCAGGGGTTTGAGTTTT
TCGGCAAACAAATGATGGCAACCAGAGTTCTTCCAGCGCGCGGTGGTGGT
CAAGGTAAACCCGCTTCTGCTACCGGACTCCCTAACCAAACAAAATCGTG
TATGCTAAGGGTCCCTCGGACGTCATTGCCCGGCTGCGCGGAACGTATAA
TGTGCCCACTACAACATCTGCCAGTCAAGCCACGGGAGCATCCACAGAGC
TCCAAAAATCGATATTTAGCGGGCCCCCAGGATCGGCGGCTTTGCCGTCG
AAGCCCAGCGGAGAAGTTAATGGAGAACCCCAAGCAGGCCAAGGTGTCAA
GCGGCCTCGTGAAGATGAAAGCGACGAAGAGGAAGCCCCTATGGACGAGG
ACAGTGATGTGCCAATGGAAGCTTCATCGGATGAAGATTAATTTGTATTG
TACCAACCTCCCAGACAAGCTGCGCAAGCATGACCTACGGCTATCCCTCT
ATATGCTTTTTTCAACCTACGGCACCGTTCTTGATGTTGTTGCCATGAAG
ACCCAAAAGATGCGTGGTCAGGCCCATATTGTTTTTAAGGATGTTCAAGC
TAGCACACAGGCTATGCGGGCTCTTCAGGGGTTTGAGTTTTTCGGCAAAC
AAATGATGGCAACCAGAGTTCTTCCAGCGCGCGGTGGTGGTCAAGGTAAA
CCCGCTTCTGCTACCGGACTCCCTAACCAAACAAAATCGTGTATGCTAAG
GGTCCCTCGGACGTCATTGCCCGGCTGCGCGGAACGTATAATGTGCCCAC
TACAACATCTGCCAGTCAAGCCACGGGAGCATCCACAGAGCTCCAAAAAT
CGATATTTAGCGGGCCCCCAGGATCGGCGGCTTTGCCGTCGAAGCCCAGC
GGAGAAGTTAATGGAGAACCCCAAGCAGGCCAAGGTGTCAAGCGGCCTCG
TGAAGATGAAAGCGACGAAGAGGAAGCCCCTATGGACGAGGACAGTGATG
TGCCAATGGAAGCTTCATCGGATGAAGATTAATTTGTATTGTACCAACCT
CCCAGACAAGCTGCGCAAGCATGACCTACGGCTATCCCTCTATATGCTTT
TTTCAACCTACGGCACCGTTCTTGATGTTGTTGCCATGAAGACCCAAAAG
ATGCGTGGTCAGGCCCATATTGTTTTTAAGGATGTTCAAGCTAGCACACA
GGCTATGCGGGCTCTTCAGGGGTTTGAGTTTTTCGGCAAACAAATGATGG
CAACCAGAGTTCTTCCAGCGCGCGGTGGTGGTCAAGGTAAACCCGCTTCT
GCTACCGGACTCCCTAACCAAAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_005725ATCC10864_005725Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005725-T1ATCC10864_005725-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005725-T1.cdsATCC10864_005725-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005725-T1.exon3ATCC10864_005725-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_005725-T1.exon2ATCC10864_005725-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_005725-T1.exon1ATCC10864_005725-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00076
InterProIPR035979
InterProIPR000504
InterProIPR012677
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000156supercontigMCQH01000156:56381..57088 -
Powered by Drupal