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ATCC10864_005805-T1, ATCC10864_005805-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_005805-T1
Unique NameATCC10864_005805-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000162:79719..80602+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_005805-T1 ID=ATCC10864_005805-T1|Name=ATCC10864_005805-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=884bp|location=Sequence derived from alignment at MCQH01000162:79719..80602+ (Aspergillus niger ATCC 10864)
ATGTCCTCCCTCAACCAAGACCAAATCAAAACCCTCGAACAATCCCGCCA ACGCCTCATCCAACTCACCCATTCCCTCGCCTCTCTCATAACCAGTCTCA ATCAAAGCGATCCTCTCCCCTCCTGGTATATATACCCCCCCAATGCCCAC TCCATCCAGCCCACCCGGGTCAACCTTACTGATATGATGATACGGACAGG ACATCCCTCCAATCCCAAGCAACCATCATCTCCAACAACCTCCTCACCAT CTCCGACCACCTCTCCGATAACCGCGACCTCCTATCCAACATCGTCGCCT ACCCCGACGCATCTTATCCGTCGCGCGTCCCCGCTAATAACGTCGCCCTC GAGCAAGTCCTGCGCACGAAACTAGATCCCCGCGTTGAGGATTGGGTAGC GCGCGGTCGTCGCGCCGGGGCGCCAACTACTTCTTCTGATGCTGGAGCCG GAGCACTGGGACAATACCAGACCAGCAGTGGACAGAGATTATTGAGTGAT GATGCGATTGCTGAATTGTGGGATTGGGCGCCTGTCGCGGCGAATGAGGA GGCCAGGAAGAGGAATTGGGGCGGCAATTATACGTTGGAGGAGCGGGAGA TGGGGATTGAGAATGTAGTTACGGGGTTGAGCAGGGTGTTGGAGGATGAT GATGAGGAGGATGAGAGTGATAGTGAAGAGGGAGAGGGCGAGGCGGATGA GATGGAGGTTGTCGGGGCAAGGAGAAGGTCCGGGGCTGGAGCTGGGCTGG AGTTCGATATTGCTGCTGCGAATACTGGGTCTGGGGCTAATGCTGGTGCG GGGGCTAAGGTGGTTGCGCCTGTGGTGCCATTGGATGAGATTCTGAGGTT CATGACTACGGGGGCTGTGCCGGGACAGCGGTGA
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Coding sequence (CDS) from alignment at MCQH01000162:79719..80602+

>ATCC10864_005805-T1 ID=ATCC10864_005805-T1|Name=ATCC10864_005805-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1620bp|location=Sequence derived from alignment at MCQH01000162:79719..80602+ (Aspergillus niger ATCC 10864)
ATGTCCTCCCTCAACCAAGACCAAATCAAAACCCTCGAACAATCCCGCCA
ACGCCTCATCCAACTCACCCATTCCCTCGCCTCTCTCATAACCAGTCTCA
ATCAAAGCGATCCTCTCCCCTCCTGGACATCCCTCCAATCCCAAGCAACC
ATCATCTCCAACAACCTCCTCACCATCTCCGACCACCTCTCCGATAACCG
CGACCTCCTATCCAACATCGTCGCCTACCCCGACGCATCTTATCCGTCGC
GCGTCCCCGCTAATAACGTCGCCCTCGAGCAAGTCCTGCGCACGAAACTA
GATCCCCGCGTTGAGGATTGGGTAGCGCGCGGTCGTCGCGCCGGGGCGCC
AACTACTTCTTCTGATGCTGGAGCCGGAGCACTGGGACAATACCAGACCA
GCAGTGGACAGAGATTATTGAGTGATGATGCGATTGCTGAATTGTGGGAT
TGGGCGCCTGTCGCGGCGAATGAGGAGGCCAGGAAGAGGAATTGGGGCGG
CAATTATACGTTGGAGGAGCGGGAGATGGGGATTGAGAATGTAGTTACGG
GGTTGAGCAGGGTGTTGGAGGATGATGATGAGGAGGATGAGAGTGATAGT
GAAGAGGGAGAGGGCGAGGCGGATGAGATGGAGGTTGTCGGGGCAAGGAG
AAGGTCCGGGGCTGGAGCTGGGCTGGAGTTCGATATTGCTGCTGCGAATA
CTGGGTCTGGGGCTAATGCTGGTGCGGGGGCTAAGGTGGTTGCGCCTGTG
GTGCCATTGGATGAGATTCTGAGGTTCATGACTACGGGGGCTGTGCCGGG
ACAGCGGTGAATGTCCTCCCTCAACCAAGACCAAATCAAAACCCTCGAAC
AATCCCGCCAACGCCTCATCCAACTCACCCATTCCCTCGCCTCTCTCATA
ACCAGTCTCAATCAAAGCGATCCTCTCCCCTCCTGGACATCCCTCCAATC
CCAAGCAACCATCATCTCCAACAACCTCCTCACCATCTCCGACCACCTCT
CCGATAACCGCGACCTCCTATCCAACATCGTCGCCTACCCCGACGCATCT
TATCCGTCGCGCGTCCCCGCTAATAACGTCGCCCTCGAGCAAGTCCTGCG
CACGAAACTAGATCCCCGCGTTGAGGATTGGGTAGCGCGCGGTCGTCGCG
CCGGGGCGCCAACTACTTCTTCTGATGCTGGAGCCGGAGCACTGGGACAA
TACCAGACCAGCAGTGGACAGAGATTATTGAGTGATGATGCGATTGCTGA
ATTGTGGGATTGGGCGCCTGTCGCGGCGAATGAGGAGGCCAGGAAGAGGA
ATTGGGGCGGCAATTATACGTTGGAGGAGCGGGAGATGGGGATTGAGAAT
GTAGTTACGGGGTTGAGCAGGGTGTTGGAGGATGATGATGAGGAGGATGA
GAGTGATAGTGAAGAGGGAGAGGGCGAGGCGGATGAGATGGAGGTTGTCG
GGGCAAGGAGAAGGTCCGGGGCTGGAGCTGGGCTGGAGTTCGATATTGCT
GCTGCGAATACTGGGTCTGGGGCTAATGCTGGTGCGGGGGCTAAGGTGGT
TGCGCCTGTGGTGCCATTGGATGAGATTCTGAGGTTCATGACTACGGGGG
CTGTGCCGGGACAGCGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MED8ATCC10864_005805Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005805-T1.exon1ATCC10864_005805-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_005805-T1.exon2ATCC10864_005805-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005805-T1.cdsATCC10864_005805-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_005805-T1ATCC10864_005805-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF10232
InterProIPR019364
Properties
Property NameValue
Productmediator of RNA polymerase II transcription subunit 8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000162supercontigMCQH01000162:79719..80602 +